RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 FREM2Q5SZK8 3169 aa7.56□□□□□ -1.2
SMARCC2-209ENST00000550164 A0A1W2PPR1 153 aa7.56□□□□□ -1.2
SMARCC2-209ENST00000550164 Q6ZSV7 163 aa7.56□□□□□ -1.2
SMARCC2-209ENST00000550164 ZFYVE26Q68DK2 2539 aa7.56□□□□□ -1.2
SMARCC2-209ENST00000550164 COX7A2LO14548 114 aa7.55□□□□□ -1.2
SMARCC2-209ENST00000550164 CRLF1O75462 422 aa7.55□□□□□ -1.2
SMARCC2-209ENST00000550164 LINC00308Q8TCZ7 52 aa7.55□□□□□ -1.2
SMARCC2-209ENST00000550164 C9orf85Q96MD7 179 aa7.55□□□□□ -1.2
SMARCC2-209ENST00000550164 CCDC179H3BU77 68 aa7.55□□□□□ -1.2
SMARCC2-209ENST00000550164 PIK3CD-AS1Q5SR53 167 aa7.55□□□□□ -1.2
SMARCC2-209ENST00000550164 RNF152Q8N8N0 203 aa7.55□□□□□ -1.2
SMARCC2-209ENST00000550164 A0A1B0GX51 115 aa7.55□□□□□ -1.2
SMARCC2-209ENST00000550164 ATP5G1P05496 136 aa7.55□□□□□ -1.2
SMARCC2-209ENST00000550164 TMEM126AQ9H061 195 aa7.55□□□□□ -1.2
SMARCC2-209ENST00000550164 CCL24O00175 119 aa7.54□□□□□ -1.2
SMARCC2-209ENST00000550164 HIST2H2BDQ6DRA6 164 aa7.54□□□□□ -1.2
SMARCC2-209ENST00000550164 JMJD1CQ15652 2540 aa7.54□□□□□ -1.2
SMARCC2-209ENST00000550164 Q6ZTI0 123 aa7.54□□□□□ -1.2
SMARCC2-209ENST00000550164 LINC00643Q86TS7 51 aa7.54□□□□□ -1.2
SMARCC2-209ENST00000550164 SPANXDQ9BXN6 97 aa7.54□□□□□ -1.2
SMARCC2-209ENST00000550164 MAP6D1Q9H9H5 199 aa7.54□□□□□ -1.2
SMARCC2-209ENST00000550164 ORMDL1Q9P0S3 153 aa7.54□□□□□ -1.2
SMARCC2-209ENST00000550164 ANGP03950 147 aaKnown RBP7.54□□□□□ -1.2
SMARCC2-209ENST00000550164 CDIP1Q9H305 208 aa7.54□□□□□ -1.2
SMARCC2-209ENST00000550164 PYGO1Q9Y3Y4 419 aa7.54□□□□□ -1.2
SMARCC2-209ENST00000550164 H0YGX0 51 aa7.54□□□□□ -1.2
SMARCC2-209ENST00000550164 H7C423 109 aa7.54□□□□□ -1.2
SMARCC2-209ENST00000550164 POM121L12Q8N7R1 296 aa7.54□□□□□ -1.2
SMARCC2-209ENST00000550164 C14orf132Q9NPU4 83 aa7.54□□□□□ -1.2
SMARCC2-209ENST00000550164 SMCPP49901 116 aaPredicted RBP7.53□□□□□ -1.2
SMARCC2-209ENST00000550164 HIST2H2BCQ6DN03 193 aa7.53□□□□□ -1.2
SMARCC2-209ENST00000550164 IGLV10-54A0A075B6I4 117 aa7.53□□□□□ -1.2
SMARCC2-209ENST00000550164 LINC01546A6NGU7 62 aa7.53□□□□□ -1.2
SMARCC2-209ENST00000550164 GHRHP01286 108 aa7.53□□□□□ -1.2
SMARCC2-209ENST00000550164 MRPL23Q16540 153 aaKnown RBP7.53□□□□□ -1.2
SMARCC2-209ENST00000550164 TMEM89A2RUT3 159 aa7.52□□□□□ -1.21
SMARCC2-209ENST00000550164 LST1O00453 97 aa7.52□□□□□ -1.21
SMARCC2-209ENST00000550164 PRO0461Q9UI25 63 aa7.52□□□□□ -1.21
SMARCC2-209ENST00000550164 PSMB8P28062 276 aa7.52□□□□□ -1.21
SMARCC2-209ENST00000550164 CITED1Q99966 193 aa7.52□□□□□ -1.21
SMARCC2-209ENST00000550164 NDUFA1O15239 70 aa7.52□□□□□ -1.21
SMARCC2-209ENST00000550164 ATOX1O00244 68 aa7.51□□□□□ -1.21
SMARCC2-209ENST00000550164 IGLV1-40P01703 118 aa7.51□□□□□ -1.21
SMARCC2-209ENST00000550164 MRPS36P82909 103 aaKnown RBP7.51□□□□□ -1.21
SMARCC2-209ENST00000550164 F5H768 121 aa7.51□□□□□ -1.21
SMARCC2-209ENST00000550164 ADAMTSL4-AS1Q5T5F5 129 aa7.51□□□□□ -1.21
SMARCC2-209ENST00000550164 SPANXCQ9NY87 97 aa7.51□□□□□ -1.21
SMARCC2-209ENST00000550164 UBE2D4Q9Y2X8 147 aa7.51□□□□□ -1.21
SMARCC2-209ENST00000550164 GYPEP15421 78 aa7.5□□□□□ -1.21
SMARCC2-209ENST00000550164 TRBV10-1A0A0K0K1A3 114 aa7.5□□□□□ -1.21
SMARCC2-209ENST00000550164 SDIM1Q6ZPB5 146 aa7.5□□□□□ -1.21
SMARCC2-209ENST00000550164 ESM1Q9NQ30 184 aa7.5□□□□□ -1.21
SMARCC2-209ENST00000550164 AVPP01185 164 aa7.49□□□□□ -1.21
SMARCC2-209ENST00000550164 TIRAPP58753 221 aa7.49□□□□□ -1.21
SMARCC2-209ENST00000550164 KIF25-AS1Q9Y6Z4 181 aa7.49□□□□□ -1.21
SMARCC2-209ENST00000550164 C16orf74Q96GX8 76 aa7.49□□□□□ -1.21
SMARCC2-209ENST00000550164 NDUFA7O95182 113 aa7.49□□□□□ -1.21
SMARCC2-209ENST00000550164 DAD1P61803 113 aa7.49□□□□□ -1.21
SMARCC2-209ENST00000550164 SLPIP03973 132 aa7.48□□□□□ -1.21
SMARCC2-209ENST00000550164 EYSQ5T1H1 3165 aa7.48□□□□□ -1.21
SMARCC2-209ENST00000550164 C18orf65Q6ZTR6 163 aa7.48□□□□□ -1.21
SMARCC2-209ENST00000550164 MAP1AP78559 2803 aaPredicted RBP7.48□□□□□ -1.21
SMARCC2-209ENST00000550164 DSCR8Q96T75 97 aa7.48□□□□□ -1.21
SMARCC2-209ENST00000550164 RBMY1FQ15415 496 aaKnown RBP7.47□□□□□ -1.21
SMARCC2-209ENST00000550164 DEFB114Q30KQ6 69 aa7.47□□□□□ -1.21
SMARCC2-209ENST00000550164 REV3LO60673 3130 aa7.47□□□□□ -1.21
SMARCC2-209ENST00000550164 TIMM17BO60830 172 aa7.47□□□□□ -1.21
SMARCC2-209ENST00000550164 LINC00315P59091 139 aa7.47□□□□□ -1.21
SMARCC2-209ENST00000550164 PRB1P04280 392 aa7.46□□□□□ -1.21
SMARCC2-209ENST00000550164 C4orf3Q8WVX3 66 aa7.46□□□□□ -1.21
SMARCC2-209ENST00000550164 UQCRQO14949 82 aa7.46□□□□□ -1.22
SMARCC2-209ENST00000550164 J3KT08 172 aa7.45□□□□□ -1.22
SMARCC2-209ENST00000550164 ZNF561-AS1K7EIQ3 104 aa7.45□□□□□ -1.22
SMARCC2-209ENST00000550164 TRAV25A0A0B4J276 109 aa7.45□□□□□ -1.22
SMARCC2-209ENST00000550164 NCR3O14931 201 aa7.45□□□□□ -1.22
SMARCC2-209ENST00000550164 ACANP16112 2415 aa7.45□□□□□ -1.22
SMARCC2-209ENST00000550164 LINC00242Q5T6M2 205 aa7.45□□□□□ -1.22
SMARCC2-209ENST00000550164 CITED2Q99967 270 aaPredicted RBP7.45□□□□□ -1.22
SMARCC2-209ENST00000550164 ANKRD17O75179 2603 aaKnown RBP7.44□□□□□ -1.22
SMARCC2-209ENST00000550164 AMELXQ99217 191 aa7.44□□□□□ -1.22
SMARCC2-209ENST00000550164 CENPEQ02224 2701 aa7.44□□□□□ -1.22
SMARCC2-209ENST00000550164 DEFB4AO15263 64 aa7.44□□□□□ -1.22
SMARCC2-209ENST00000550164 CHCHD7Q9BUK0 85 aa7.44□□□□□ -1.22
SMARCC2-209ENST00000550164 COL27A1Q8IZC6 1860 aaPredicted RBP7.44□□□□□ -1.22
SMARCC2-209ENST00000550164 MYO15AQ9UKN7 3530 aa7.43□□□□□ -1.22
SMARCC2-209ENST00000550164 hADV29S1A0JD25 119 aa7.43□□□□□ -1.22
SMARCC2-209ENST00000550164 COX6A2Q02221 97 aa7.43□□□□□ -1.22
SMARCC2-209ENST00000550164 Q6YL49 198 aa7.43□□□□□ -1.22
SMARCC2-209ENST00000550164 C3orf22Q8N5N4 141 aa7.43□□□□□ -1.22
SMARCC2-209ENST00000550164 TRAV23DV6A0A075B6W5 121 aa7.43□□□□□ -1.22
SMARCC2-209ENST00000550164 Q6Q795 121 aa7.43□□□□□ -1.22
SMARCC2-209ENST00000550164 Q6ZSN1 163 aa7.43□□□□□ -1.22
SMARCC2-209ENST00000550164 LOC100131303A0A0U1RQF7 123 aa7.43□□□□□ -1.22
SMARCC2-209ENST00000550164 DEFB113Q30KQ7 82 aa7.43□□□□□ -1.22
SMARCC2-209ENST00000550164 JMJD7-PLA2G4BH0Y9G9 81 aa7.42□□□□□ -1.22
SMARCC2-209ENST00000550164 LINC00694P0DN24 101 aa7.42□□□□□ -1.22
SMARCC2-209ENST00000550164 ZNF702PQ9H963 129 aa7.42□□□□□ -1.22
SMARCC2-209ENST00000550164 FAM240AA0A1B0GVK7 77 aa7.41□□□□□ -1.22
SMARCC2-209ENST00000550164 SMIM1B2RUZ4 78 aa7.41□□□□□ -1.22
SMARCC2-209ENST00000550164 ZNF462Q96JM2 2506 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms