RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 IGKV3OR2-268A0A0C4DH90 116 aa17.07■□□□□ 0.32
CPSF6-205ENST00000550075 DGAT2L7PQ6IED9 249 aa17.07■□□□□ 0.32
CPSF6-205ENST00000550075 USP17L23D6RBM5 183 aa17.06■□□□□ 0.32
CPSF6-205ENST00000550075 KRTAP26-1Q6PEX3 210 aa17.06■□□□□ 0.32
CPSF6-205ENST00000550075 KRTAP10-1P60331 282 aa17.05■□□□□ 0.32
CPSF6-205ENST00000550075 NDUFA5Q16718 116 aa17.04■□□□□ 0.32
CPSF6-205ENST00000550075 CLRN3Q8NCR9 226 aa17.03■□□□□ 0.32
CPSF6-205ENST00000550075 MAP1LC3AQ9H492 121 aa17.03■□□□□ 0.32
CPSF6-205ENST00000550075 RYR1P21817 5038 aa17.03■□□□□ 0.32
CPSF6-205ENST00000550075 RPS10P5Q9NQ39 176 aa17.02■□□□□ 0.32
CPSF6-205ENST00000550075 RAB5AP20339 215 aa17.01■□□□□ 0.31
CPSF6-205ENST00000550075 CSDC2Q9Y534 153 aaKnown RBP17.01■□□□□ 0.31
CPSF6-205ENST00000550075 ZNF664Q8N3J9 261 aa17■□□□□ 0.31
CPSF6-205ENST00000550075 TIMM21Q9BVV7 248 aa17■□□□□ 0.31
CPSF6-205ENST00000550075 CDC42SE2Q9NRR3 84 aa17■□□□□ 0.31
CPSF6-205ENST00000550075 GAGE12HA6NDE8 117 aa16.99■□□□□ 0.31
CPSF6-205ENST00000550075 CHCHD10Q8WYQ3 142 aaPredicted RBP16.99■□□□□ 0.31
CPSF6-205ENST00000550075 UBE2D4Q9Y2X8 147 aa16.99■□□□□ 0.31
CPSF6-205ENST00000550075 APOBP04114 4563 aaKnown RBP16.98■□□□□ 0.31
CPSF6-205ENST00000550075 COX19Q49B96 90 aa16.98■□□□□ 0.31
CPSF6-205ENST00000550075 APOC3P02656 99 aa16.97■□□□□ 0.31
CPSF6-205ENST00000550075 PRSS47A8MTI9 375 aa16.96■□□□□ 0.31
CPSF6-205ENST00000550075 SNAPINO95295 136 aa16.96■□□□□ 0.31
CPSF6-205ENST00000550075 SS18Q15532 418 aa16.96■□□□□ 0.31
CPSF6-205ENST00000550075 CFAP161Q6P656 301 aa16.96■□□□□ 0.31
CPSF6-205ENST00000550075 SVBPQ8N300 66 aa16.96■□□□□ 0.31
CPSF6-205ENST00000550075 HSPG2P98160 4391 aa16.96■□□□□ 0.3
CPSF6-205ENST00000550075 LINC00959A0A1B0GUT2 108 aa16.95■□□□□ 0.3
CPSF6-205ENST00000550075 PRSS1P07477 247 aa16.95■□□□□ 0.3
CPSF6-205ENST00000550075 GNB1LQ9BYB4 327 aa16.95■□□□□ 0.3
CPSF6-205ENST00000550075 SPANXA1Q9NS26 97 aa16.95■□□□□ 0.3
CPSF6-205ENST00000550075 LOC389332A0A1B0GUA5 103 aa16.94■□□□□ 0.3
CPSF6-205ENST00000550075 CCL25O15444 150 aa16.93■□□□□ 0.3
CPSF6-205ENST00000550075 MT-ND6P03923 174 aa16.93■□□□□ 0.3
CPSF6-205ENST00000550075 XCL1P47992 114 aa16.93■□□□□ 0.3
CPSF6-205ENST00000550075 RPL39P62891 51 aaKnown RBP16.93■□□□□ 0.3
CPSF6-205ENST00000550075 Q8N8P6 123 aa16.93■□□□□ 0.3
CPSF6-205ENST00000550075 AP5S1Q9NUS5 200 aa16.93■□□□□ 0.3
CPSF6-205ENST00000550075 hDV102S1A0JD36 115 aa16.92■□□□□ 0.3
CPSF6-205ENST00000550075 Q6ZUT4 128 aa16.92■□□□□ 0.3
CPSF6-205ENST00000550075 K7EMI3 77 aa16.91■□□□□ 0.3
CPSF6-205ENST00000550075 NXT2Q9NPJ8 142 aaKnown RBP16.91■□□□□ 0.3
CPSF6-205ENST00000550075 C1orf196B1AJZ1 125 aa16.9■□□□□ 0.3
CPSF6-205ENST00000550075 IFI27P40305 119 aaPredicted RBP16.89■□□□□ 0.29
CPSF6-205ENST00000550075 XGP55808 180 aa16.89■□□□□ 0.29
CPSF6-205ENST00000550075 FOXI1Q12951 378 aa16.89■□□□□ 0.29
CPSF6-205ENST00000550075 ORMDL2Q53FV1 153 aa16.89■□□□□ 0.29
CPSF6-205ENST00000550075 MRPS36P82909 103 aaKnown RBP16.88■□□□□ 0.29
CPSF6-205ENST00000550075 KIAA1644Q3SXP7 199 aa16.88■□□□□ 0.29
CPSF6-205ENST00000550075 LINC01620Q4KN68 170 aa16.88■□□□□ 0.29
CPSF6-205ENST00000550075 RNASE13Q5GAN3 156 aaKnown RBP16.88■□□□□ 0.29
CPSF6-205ENST00000550075 CD164L2Q6UWJ8 174 aa16.88■□□□□ 0.29
CPSF6-205ENST00000550075 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.87■□□□□ 0.29
CPSF6-205ENST00000550075 CNBPP62633 177 aaKnown RBP16.87■□□□□ 0.29
CPSF6-205ENST00000550075 Q8N1X5 172 aa16.87■□□□□ 0.29
CPSF6-205ENST00000550075 C15orf56Q8N910 161 aa16.87■□□□□ 0.29
CPSF6-205ENST00000550075 TRAV13-1A0A0B4J241 112 aa16.86■□□□□ 0.29
CPSF6-205ENST00000550075 Q6ZSA8 131 aa16.86■□□□□ 0.29
CPSF6-205ENST00000550075 CYSLTR1Q9Y271 337 aa16.86■□□□□ 0.29
CPSF6-205ENST00000550075 PYGO1Q9Y3Y4 419 aa16.85■□□□□ 0.29
CPSF6-205ENST00000550075 G0S2P27469 103 aa16.84■□□□□ 0.29
CPSF6-205ENST00000550075 C9orf163Q8N9P6 203 aa16.84■□□□□ 0.29
CPSF6-205ENST00000550075 MRPL18Q9H0U6 180 aaKnown RBP16.84■□□□□ 0.29
CPSF6-205ENST00000550075 GVQW2A0A096LPI5 108 aaPredicted RBP16.83■□□□□ 0.28
CPSF6-205ENST00000550075 IGHV1-58A0A0C4DH39 117 aa16.83■□□□□ 0.28
CPSF6-205ENST00000550075 FABP9Q0Z7S8 132 aa16.83■□□□□ 0.28
CPSF6-205ENST00000550075 FAM30AQ9NZY2 134 aa16.83■□□□□ 0.28
CPSF6-205ENST00000550075 IFITM10A6NMD0 228 aa16.82■□□□□ 0.28
CPSF6-205ENST00000550075 C2orf66Q6UXQ4 117 aa16.82■□□□□ 0.28
CPSF6-205ENST00000550075 COX7A2LO14548 114 aa16.81■□□□□ 0.28
CPSF6-205ENST00000550075 MALP21145 153 aa16.81■□□□□ 0.28
CPSF6-205ENST00000550075 HIGD2BQ4VC39 106 aa16.81■□□□□ 0.28
CPSF6-205ENST00000550075 TGIF2-C20orf24A0A0A6YYL0 155 aa16.8■□□□□ 0.28
CPSF6-205ENST00000550075 HAMPP81172 84 aa16.8■□□□□ 0.28
CPSF6-205ENST00000550075 PRSS3P2Q8NHM4 247 aa16.8■□□□□ 0.28
CPSF6-205ENST00000550075 ALKBH7Q9BT30 221 aaPredicted RBP16.8■□□□□ 0.28
CPSF6-205ENST00000550075 Q6ZN92 141 aa16.79■□□□□ 0.28
CPSF6-205ENST00000550075 TMEM141Q96I45 108 aa16.79■□□□□ 0.28
CPSF6-205ENST00000550075 OPRPNQ99935 248 aaPredicted RBP16.79■□□□□ 0.28
CPSF6-205ENST00000550075 DNAH8Q96JB1 4490 aa16.79■□□□□ 0.28
CPSF6-205ENST00000550075 IGLV4-3A0A075B6K6 122 aa16.78■□□□□ 0.28
CPSF6-205ENST00000550075 IGHV3-64A0A075B6Q5 118 aa16.77■□□□□ 0.28
CPSF6-205ENST00000550075 FAM104AQ969W3 186 aa16.77■□□□□ 0.28
CPSF6-205ENST00000550075 EPM2AB3EWF7 344 aa16.76■□□□□ 0.27
CPSF6-205ENST00000550075 NPSP0C0P6 89 aa16.76■□□□□ 0.27
CPSF6-205ENST00000550075 TEX43Q6ZNM6 134 aa16.76■□□□□ 0.27
CPSF6-205ENST00000550075 TRAPPC1Q9Y5R8 145 aa16.76■□□□□ 0.27
CPSF6-205ENST00000550075 ZNF561-AS1K7EIQ3 104 aa16.75■□□□□ 0.27
CPSF6-205ENST00000550075 C2orf88Q9BSF0 95 aa16.75■□□□□ 0.27
CPSF6-205ENST00000550075 CHAC1Q9BUX1 264 aa16.75■□□□□ 0.27
CPSF6-205ENST00000550075 APOMO95445 188 aa16.74■□□□□ 0.27
CPSF6-205ENST00000550075 PAPPA-AS1Q5QFB9 102 aa16.74■□□□□ 0.27
CPSF6-205ENST00000550075 SMCO4Q9NRQ5 59 aa16.74■□□□□ 0.27
CPSF6-205ENST00000550075 LINC01549A6NIU2 74 aa16.73■□□□□ 0.27
CPSF6-205ENST00000550075 SLPIP03973 132 aa16.73■□□□□ 0.27
CPSF6-205ENST00000550075 FA2HQ7L5A8 372 aa16.73■□□□□ 0.27
CPSF6-205ENST00000550075 SCXQ7RTU7 201 aa16.73■□□□□ 0.27
CPSF6-205ENST00000550075 SMR3BP02814 79 aaPredicted RBP16.72■□□□□ 0.27
CPSF6-205ENST00000550075 C5orf38Q86SI9 138 aa16.72■□□□□ 0.27
CPSF6-205ENST00000550075 PKIGQ9Y2B9 76 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms