RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 DGAT2L7PQ6IED9 249 aa12.79□□□□□ -0.36
DDX54-207ENST00000550016 CDPF1Q6NVV7 123 aa12.79□□□□□ -0.36
DDX54-207ENST00000550016 KRTAP26-1Q6PEX3 210 aa12.79□□□□□ -0.36
DDX54-207ENST00000550016 CSDC2Q9Y534 153 aaKnown RBP12.79□□□□□ -0.36
DDX54-207ENST00000550016 Q8N8P6 123 aa12.78□□□□□ -0.36
DDX54-207ENST00000550016 TIMM21Q9BVV7 248 aa12.78□□□□□ -0.36
DDX54-207ENST00000550016 CDC42SE2Q9NRR3 84 aa12.78□□□□□ -0.36
DDX54-207ENST00000550016 UBE2D4Q9Y2X8 147 aa12.78□□□□□ -0.36
DDX54-207ENST00000550016 IGKV3OR2-268A0A0C4DH90 116 aa12.77□□□□□ -0.37
DDX54-207ENST00000550016 FUSP35637 526 aaKnown RBP eCLIP12.77□□□□□ -0.37
DDX54-207ENST00000550016 ZNF664Q8N3J9 261 aa12.77□□□□□ -0.37
DDX54-207ENST00000550016 NTN5Q8WTR8 489 aaPredicted RBP12.77□□□□□ -0.37
DDX54-207ENST00000550016 MRPL18Q9H0U6 180 aaKnown RBP12.77□□□□□ -0.37
DDX54-207ENST00000550016 FABP9Q0Z7S8 132 aa12.76□□□□□ -0.37
DDX54-207ENST00000550016 NXT2Q9NPJ8 142 aaKnown RBP12.76□□□□□ -0.37
DDX54-207ENST00000550016 PKHD1P08F94 4074 aa12.75□□□□□ -0.37
DDX54-207ENST00000550016 RPL39P62891 51 aaKnown RBP12.75□□□□□ -0.37
DDX54-207ENST00000550016 ALKBH7Q9BT30 221 aaPredicted RBP12.75□□□□□ -0.37
DDX54-207ENST00000550016 K7EMI3 77 aa12.74□□□□□ -0.37
DDX54-207ENST00000550016 IFI27P40305 119 aaPredicted RBP12.73□□□□□ -0.37
DDX54-207ENST00000550016 C14orf177Q52M58 125 aa12.73□□□□□ -0.37
DDX54-207ENST00000550016 YPEL4Q96NS1 127 aa12.73□□□□□ -0.37
DDX54-207ENST00000550016 SPANXA1Q9NS26 97 aa12.73□□□□□ -0.37
DDX54-207ENST00000550016 TRAPPC1Q9Y5R8 145 aa12.73□□□□□ -0.37
DDX54-207ENST00000550016 IGLV5-52A0A0A0MRZ9 124 aa12.72□□□□□ -0.37
DDX54-207ENST00000550016 LINC00959A0A1B0GUT2 108 aa12.72□□□□□ -0.37
DDX54-207ENST00000550016 USP17L23D6RBM5 183 aa12.72□□□□□ -0.37
DDX54-207ENST00000550016 CHCHD10Q8WYQ3 142 aaPredicted RBP12.72□□□□□ -0.37
DDX54-207ENST00000550016 SMCO4Q9NRQ5 59 aa12.72□□□□□ -0.37
DDX54-207ENST00000550016 GAGE12HA6NDE8 117 aa12.71□□□□□ -0.37
DDX54-207ENST00000550016 SS18Q15532 418 aa12.71□□□□□ -0.37
DDX54-207ENST00000550016 ORMDL2Q53FV1 153 aa12.71□□□□□ -0.37
DDX54-207ENST00000550016 BIRC6Q9NR09 4857 aa12.7□□□□□ -0.38
DDX54-207ENST00000550016 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.7□□□□□ -0.38
DDX54-207ENST00000550016 Q6ZUT4 128 aa12.7□□□□□ -0.38
DDX54-207ENST00000550016 PRSS3P2Q8NHM4 247 aa12.7□□□□□ -0.38
DDX54-207ENST00000550016 DNAH11Q96DT5 4516 aa12.7□□□□□ -0.38
DDX54-207ENST00000550016 GCSHP23434 173 aa12.69□□□□□ -0.38
DDX54-207ENST00000550016 MRPS36P82909 103 aaKnown RBP12.69□□□□□ -0.38
DDX54-207ENST00000550016 RNASE13Q5GAN3 156 aaKnown RBP12.69□□□□□ -0.38
DDX54-207ENST00000550016 CBLN2Q8IUK8 224 aa12.69□□□□□ -0.38
DDX54-207ENST00000550016 PYGO1Q9Y3Y4 419 aa12.69□□□□□ -0.38
DDX54-207ENST00000550016 CCL25O15444 150 aa12.68□□□□□ -0.38
DDX54-207ENST00000550016 G0S2P27469 103 aa12.68□□□□□ -0.38
DDX54-207ENST00000550016 FAM104AQ969W3 186 aa12.68□□□□□ -0.38
DDX54-207ENST00000550016 CYSLTR1Q9Y271 337 aa12.68□□□□□ -0.38
DDX54-207ENST00000550016 C1orf196B1AJZ1 125 aa12.67□□□□□ -0.38
DDX54-207ENST00000550016 XCL1P47992 114 aa12.67□□□□□ -0.38
DDX54-207ENST00000550016 C2orf66Q6UXQ4 117 aa12.67□□□□□ -0.38
DDX54-207ENST00000550016 OPRPNQ99935 248 aaPredicted RBP12.67□□□□□ -0.38
DDX54-207ENST00000550016 PRSS1P07477 247 aa12.66□□□□□ -0.38
DDX54-207ENST00000550016 FOXI1Q12951 378 aa12.66□□□□□ -0.38
DDX54-207ENST00000550016 TRAV13-1A0A0B4J241 112 aa12.65□□□□□ -0.38
DDX54-207ENST00000550016 LINC01546A6NGU7 62 aa12.65□□□□□ -0.38
DDX54-207ENST00000550016 KRTAP10-1P60331 282 aa12.65□□□□□ -0.38
DDX54-207ENST00000550016 CFAP161Q6P656 301 aa12.65□□□□□ -0.38
DDX54-207ENST00000550016 CD164L2Q6UWJ8 174 aa12.64□□□□□ -0.39
DDX54-207ENST00000550016 IGLV4-3A0A075B6K6 122 aa12.63□□□□□ -0.39
DDX54-207ENST00000550016 CDK2AP2O75956 126 aa12.63□□□□□ -0.39
DDX54-207ENST00000550016 FA2HQ7L5A8 372 aa12.63□□□□□ -0.39
DDX54-207ENST00000550016 TMEM141Q96I45 108 aa12.63□□□□□ -0.39
DDX54-207ENST00000550016 hDV102S1A0JD36 115 aa12.62□□□□□ -0.39
DDX54-207ENST00000550016 C18orf32Q8TCD1 76 aa12.62□□□□□ -0.39
DDX54-207ENST00000550016 IGIPA6NJ69 53 aa12.61□□□□□ -0.39
DDX54-207ENST00000550016 IFITM10A6NMD0 228 aa12.61□□□□□ -0.39
DDX54-207ENST00000550016 NPSP0C0P6 89 aa12.61□□□□□ -0.39
DDX54-207ENST00000550016 C15orf56Q8N910 161 aa12.61□□□□□ -0.39
DDX54-207ENST00000550016 TOMM6Q96B49 74 aa12.61□□□□□ -0.39
DDX54-207ENST00000550016 LINC01549A6NIU2 74 aa12.59□□□□□ -0.39
DDX54-207ENST00000550016 Q6ZN92 141 aa12.59□□□□□ -0.39
DDX54-207ENST00000550016 AP5S1Q9NUS5 200 aa12.59□□□□□ -0.39
DDX54-207ENST00000550016 IGHV1-58A0A0C4DH39 117 aa12.58□□□□□ -0.4
DDX54-207ENST00000550016 COX7A2LO14548 114 aa12.58□□□□□ -0.4
DDX54-207ENST00000550016 LINC00614P0C842 121 aa12.58□□□□□ -0.4
DDX54-207ENST00000550016 LINC01620Q4KN68 170 aa12.58□□□□□ -0.4
DDX54-207ENST00000550016 TEX43Q6ZNM6 134 aa12.58□□□□□ -0.4
DDX54-207ENST00000550016 TIMM17AQ99595 171 aa12.58□□□□□ -0.4
DDX54-207ENST00000550016 VCX2Q9H322 139 aa12.58□□□□□ -0.4
DDX54-207ENST00000550016 PAPPA-AS1Q5QFB9 102 aa12.57□□□□□ -0.4
DDX54-207ENST00000550016 ERASQ7Z444 233 aa12.57□□□□□ -0.4
DDX54-207ENST00000550016 SCGB3A1Q96QR1 104 aa12.57□□□□□ -0.4
DDX54-207ENST00000550016 AMELXQ99217 191 aa12.57□□□□□ -0.4
DDX54-207ENST00000550016 GVQW2A0A096LPI5 108 aaPredicted RBP12.56□□□□□ -0.4
DDX54-207ENST00000550016 MALP21145 153 aa12.56□□□□□ -0.4
DDX54-207ENST00000550016 RAB5BP61020 215 aa12.56□□□□□ -0.4
DDX54-207ENST00000550016 CNBPP62633 177 aaKnown RBP12.56□□□□□ -0.4
DDX54-207ENST00000550016 HIGD2BQ4VC39 106 aa12.56□□□□□ -0.4
DDX54-207ENST00000550016 URB1-AS1Q96HZ7 61 aa12.56□□□□□ -0.4
DDX54-207ENST00000550016 C2orf88Q9BSF0 95 aa12.56□□□□□ -0.4
DDX54-207ENST00000550016 DYNC1H1Q14204 4646 aaKnown RBP12.55□□□□□ -0.4
DDX54-207ENST00000550016 COLCA2A8K830 154 aa12.55□□□□□ -0.4
DDX54-207ENST00000550016 LINC00173Q6ZV60 143 aa12.55□□□□□ -0.4
DDX54-207ENST00000550016 C5orf38Q86SI9 138 aa12.55□□□□□ -0.4
DDX54-207ENST00000550016 C9orf163Q8N9P6 203 aa12.55□□□□□ -0.4
DDX54-207ENST00000550016 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.54□□□□□ -0.4
DDX54-207ENST00000550016 IGHV3OR16-9A0A0B4J2B5 98 aa12.54□□□□□ -0.4
DDX54-207ENST00000550016 SLPIP03973 132 aa12.54□□□□□ -0.4
DDX54-207ENST00000550016 ZC2HC1BQ5TFG8 222 aa12.54□□□□□ -0.4
DDX54-207ENST00000550016 TRGC2P03986 189 aa12.53□□□□□ -0.4
DDX54-207ENST00000550016 UBE2D1P51668 147 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms