RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 MUC4Q99102 2169 aa5.78□□□□□ -1.48
UBR1-202ENST00000546274 FP248Q71RG6 208 aaPredicted RBP5.78□□□□□ -1.48
UBR1-202ENST00000546274 C14orf132Q9NPU4 83 aa5.78□□□□□ -1.48
UBR1-202ENST00000546274 SERP1Q9Y6X1 66 aa5.78□□□□□ -1.48
UBR1-202ENST00000546274 RBMY1BA6NDE4 496 aaKnown RBP5.78□□□□□ -1.48
UBR1-202ENST00000546274 RBMY1EA6NEQ0 496 aaKnown RBP5.78□□□□□ -1.48
UBR1-202ENST00000546274 NDUFC2O95298 119 aa5.78□□□□□ -1.48
UBR1-202ENST00000546274 RBMY1DP0C7P1 496 aaKnown RBP5.78□□□□□ -1.48
UBR1-202ENST00000546274 RBMY1A1P0DJD3 496 aaKnown RBP5.78□□□□□ -1.48
UBR1-202ENST00000546274 RBMY1CP0DJD4 496 aa5.78□□□□□ -1.48
UBR1-202ENST00000546274 RBMY1FQ15415 496 aaKnown RBP5.78□□□□□ -1.48
UBR1-202ENST00000546274 NDUFA12Q9UI09 145 aa5.78□□□□□ -1.48
UBR1-202ENST00000546274 INAFM2P0DMQ5 153 aa5.77□□□□□ -1.48
UBR1-202ENST00000546274 TMEM141Q96I45 108 aa5.77□□□□□ -1.48
UBR1-202ENST00000546274 LITAFQ99732 161 aa5.77□□□□□ -1.48
UBR1-202ENST00000546274 RETNQ9HD89 108 aa5.77□□□□□ -1.48
UBR1-202ENST00000546274 LINC00846Q9NV44 126 aa5.77□□□□□ -1.48
UBR1-202ENST00000546274 LENEPQ9Y5L5 61 aa5.77□□□□□ -1.48
UBR1-202ENST00000546274 HIVEP3Q5T1R4 2406 aa5.77□□□□□ -1.49
UBR1-202ENST00000546274 CRYBG3Q68DQ2 2970 aa5.77□□□□□ -1.49
UBR1-202ENST00000546274 CELSR2Q9HCU4 2923 aa5.77□□□□□ -1.49
UBR1-202ENST00000546274 C4orf48Q5BLP8 95 aa5.77□□□□□ -1.49
UBR1-202ENST00000546274 C16orf95Q9H693 158 aa5.77□□□□□ -1.49
UBR1-202ENST00000546274 SPTBN1Q01082 2364 aaKnown RBP5.77□□□□□ -1.49
UBR1-202ENST00000546274 IGHV1-69DA0A0B4J2H0 117 aa5.77□□□□□ -1.49
UBR1-202ENST00000546274 SDHAF1A6NFY7 115 aa5.77□□□□□ -1.49
UBR1-202ENST00000546274 KNCNA6PVL3 124 aa5.76□□□□□ -1.49
UBR1-202ENST00000546274 APRG1Q8IVJ8 170 aa5.76□□□□□ -1.49
UBR1-202ENST00000546274 MPLKIPQ8TAP9 179 aa5.76□□□□□ -1.49
UBR1-202ENST00000546274 MOB4Q9Y3A3 225 aa5.76□□□□□ -1.49
UBR1-202ENST00000546274 COL12A1Q99715 3063 aa5.76□□□□□ -1.49
UBR1-202ENST00000546274 A0A087WWL8 130 aa5.76□□□□□ -1.49
UBR1-202ENST00000546274 SMIM26A0A096LP01 95 aa5.76□□□□□ -1.49
UBR1-202ENST00000546274 IGHG2P01859 326 aa5.76□□□□□ -1.49
UBR1-202ENST00000546274 XCL1P47992 114 aa5.76□□□□□ -1.49
UBR1-202ENST00000546274 RBM3P98179 157 aaKnown RBP5.76□□□□□ -1.49
UBR1-202ENST00000546274 MIAQ16674 131 aa5.76□□□□□ -1.49
UBR1-202ENST00000546274 RNASE13Q5GAN3 156 aaKnown RBP5.76□□□□□ -1.49
UBR1-202ENST00000546274 ZNF625Q96I27 306 aaPredicted RBP5.76□□□□□ -1.49
UBR1-202ENST00000546274 XCL2Q9UBD3 114 aa5.76□□□□□ -1.49
UBR1-202ENST00000546274 F6UB75 175 aa5.76□□□□□ -1.49
UBR1-202ENST00000546274 COX7A2LO14548 114 aa5.76□□□□□ -1.49
UBR1-202ENST00000546274 RNASE3P12724 160 aaKnown RBP5.76□□□□□ -1.49
UBR1-202ENST00000546274 Q8N2B8 174 aa5.76□□□□□ -1.49
UBR1-202ENST00000546274 TIMM17AQ99595 171 aa5.76□□□□□ -1.49
UBR1-202ENST00000546274 FAM74A4Q5TZK3 123 aa5.75□□□□□ -1.49
UBR1-202ENST00000546274 BRD3OSQ6XYD6 125 aa5.75□□□□□ -1.49
UBR1-202ENST00000546274 MYO18BQ8IUG5 2567 aa5.75□□□□□ -1.49
UBR1-202ENST00000546274 C19orf84I3L1E1 186 aa5.75□□□□□ -1.49
UBR1-202ENST00000546274 NDUFA4O00483 81 aa5.75□□□□□ -1.49
UBR1-202ENST00000546274 GNRH2O43555 120 aa5.75□□□□□ -1.49
UBR1-202ENST00000546274 PSMB8P28062 276 aa5.75□□□□□ -1.49
UBR1-202ENST00000546274 C9orf129Q5T035 196 aaKnown RBP5.75□□□□□ -1.49
UBR1-202ENST00000546274 SNURFQ9Y675 71 aa5.75□□□□□ -1.49
UBR1-202ENST00000546274 GCN1Q92616 2671 aaKnown RBP5.74□□□□□ -1.49
UBR1-202ENST00000546274 TRAV21A0A0B4J279 112 aa5.74□□□□□ -1.49
UBR1-202ENST00000546274 VCYO14598 125 aa5.74□□□□□ -1.49
UBR1-202ENST00000546274 LINC00315P59091 139 aa5.74□□□□□ -1.49
UBR1-202ENST00000546274 FAM218AQ96MZ4 157 aa5.74□□□□□ -1.49
UBR1-202ENST00000546274 KIF25-AS1Q9Y6Z4 181 aa5.74□□□□□ -1.49
UBR1-202ENST00000546274 CSMD2Q7Z408 3487 aa5.74□□□□□ -1.49
UBR1-202ENST00000546274 RPL28P46779 137 aaKnown RBP5.74□□□□□ -1.49
UBR1-202ENST00000546274 S100A7L2Q5SY68 101 aa5.74□□□□□ -1.49
UBR1-202ENST00000546274 Q6JHZ5 121 aa5.74□□□□□ -1.49
UBR1-202ENST00000546274 C22orf24Q9Y442 160 aa5.74□□□□□ -1.49
UBR1-202ENST00000546274 NDUFC2-KCTD14E9PQ53 114 aa5.74□□□□□ -1.49
UBR1-202ENST00000546274 IGHV1-69P01742 117 aa5.74□□□□□ -1.49
UBR1-202ENST00000546274 MED14OSP0DP75 135 aa5.74□□□□□ -1.49
UBR1-202ENST00000546274 RNASE4P34096 147 aaKnown RBP5.74□□□□□ -1.49
UBR1-202ENST00000546274 UBE2D4Q9Y2X8 147 aa5.74□□□□□ -1.49
UBR1-202ENST00000546274 A0A0J9YX75 114 aa5.73□□□□□ -1.49
UBR1-202ENST00000546274 TIMM17BO60830 172 aa5.73□□□□□ -1.49
UBR1-202ENST00000546274 HELZ2Q9BYK8 2649 aaKnown RBP5.73□□□□□ -1.49
UBR1-202ENST00000546274 DOPEY2Q9Y3R5 2298 aa5.73□□□□□ -1.49
UBR1-202ENST00000546274 PPP1R17O96001 155 aa5.73□□□□□ -1.49
UBR1-202ENST00000546274 IGHV3-11P01762 117 aa5.73□□□□□ -1.49
UBR1-202ENST00000546274 RPL11P62913 178 aaKnown RBP5.73□□□□□ -1.49
UBR1-202ENST00000546274 LYPD5Q6UWN5 251 aa5.73□□□□□ -1.49
UBR1-202ENST00000546274 SOSTDC1Q6X4U4 206 aa5.73□□□□□ -1.49
UBR1-202ENST00000546274 FAM19A1Q7Z5A9 133 aa5.73□□□□□ -1.49
UBR1-202ENST00000546274 H7BZZ5 65 aa5.73□□□□□ -1.49
UBR1-202ENST00000546274 IGHV4-38-2P0DP08 117 aa5.73□□□□□ -1.49
UBR1-202ENST00000546274 AKAP6Q13023 2319 aa5.72□□□□□ -1.49
UBR1-202ENST00000546274 SORL1Q92673 2214 aa5.72□□□□□ -1.49
UBR1-202ENST00000546274 KLLNB2CW77 178 aa5.72□□□□□ -1.49
UBR1-202ENST00000546274 POLR2KP53803 58 aaKnown RBP5.72□□□□□ -1.49
UBR1-202ENST00000546274 SUMO4Q6EEV6 95 aa5.72□□□□□ -1.49
UBR1-202ENST00000546274 TENM4Q6N022 2769 aa5.72□□□□□ -1.49
UBR1-202ENST00000546274 BAHCC1Q9P281 2608 aa5.72□□□□□ -1.49
UBR1-202ENST00000546274 IGHV4-61A0A0C4DH41 118 aa5.71□□□□□ -1.49
UBR1-202ENST00000546274 IGLV1-40P01703 118 aa5.71□□□□□ -1.49
UBR1-202ENST00000546274 BLCAPP62952 87 aa5.71□□□□□ -1.49
UBR1-202ENST00000546274 LY6EQ16553 131 aa5.71□□□□□ -1.49
UBR1-202ENST00000546274 IGKV3-7A0A075B6H7 116 aa5.71□□□□□ -1.5
UBR1-202ENST00000546274 TRBV27A0A0K0K1C4 114 aa5.71□□□□□ -1.5
UBR1-202ENST00000546274 A6NDX4 124 aa5.71□□□□□ -1.5
UBR1-202ENST00000546274 H3BUA1 57 aa5.71□□□□□ -1.5
UBR1-202ENST00000546274 CFHR3Q02985 330 aa5.71□□□□□ -1.5
UBR1-202ENST00000546274 ENHOQ6UWT2 76 aa5.71□□□□□ -1.5
UBR1-202ENST00000546274 RMI2Q96E14 147 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms