RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 ICOSQ9Y6W8 199 aa10.98□□□□□ -0.65
CNN3-207ENST00000545882 C1orf158Q8N1D5 194 aa10.97□□□□□ -0.65
CNN3-207ENST00000545882 IL17DQ8TAD2 202 aa10.97□□□□□ -0.65
CNN3-207ENST00000545882 TMEM101Q96IK0 257 aa10.97□□□□□ -0.65
CNN3-207ENST00000545882 XCL2Q9UBD3 114 aa10.97□□□□□ -0.65
CNN3-207ENST00000545882 ABCA12Q86UK0 2595 aa10.97□□□□□ -0.65
CNN3-207ENST00000545882 IGHV3OR16-12A0A075B7B8 117 aa10.97□□□□□ -0.65
CNN3-207ENST00000545882 TIMM17BO60830 172 aa10.97□□□□□ -0.65
CNN3-207ENST00000545882 NTN5Q8WTR8 489 aaPredicted RBP10.97□□□□□ -0.65
CNN3-207ENST00000545882 CLUHP3Q96NS8 147 aa10.97□□□□□ -0.65
CNN3-207ENST00000545882 RNF183Q96D59 192 aa10.96□□□□□ -0.65
CNN3-207ENST00000545882 TRBV10-2A0A0K0K1G8 114 aa10.96□□□□□ -0.66
CNN3-207ENST00000545882 NDUFA1O15239 70 aa10.96□□□□□ -0.66
CNN3-207ENST00000545882 LINC00694P0DN24 101 aa10.96□□□□□ -0.66
CNN3-207ENST00000545882 DAND5Q8N907 189 aa10.96□□□□□ -0.66
CNN3-207ENST00000545882 APCP25054 2843 aa10.95□□□□□ -0.66
CNN3-207ENST00000545882 TMEM262E9PQX1 116 aa10.94□□□□□ -0.66
CNN3-207ENST00000545882 LINC00242Q5T6M2 205 aa10.94□□□□□ -0.66
CNN3-207ENST00000545882 IGLV5-39A0A0G2JS06 123 aa10.94□□□□□ -0.66
CNN3-207ENST00000545882 TMEM86BQ8N661 226 aa10.94□□□□□ -0.66
CNN3-207ENST00000545882 YAE1D1Q9NRH1 226 aa10.94□□□□□ -0.66
CNN3-207ENST00000545882 NBPF19A0A087WUL8 3843 aa10.93□□□□□ -0.66
CNN3-207ENST00000545882 TEX49A0A1B0GTD5 131 aa10.93□□□□□ -0.66
CNN3-207ENST00000545882 H7C423 109 aa10.93□□□□□ -0.66
CNN3-207ENST00000545882 NDUFA7O95182 113 aa10.93□□□□□ -0.66
CNN3-207ENST00000545882 IFITM1P13164 125 aa10.93□□□□□ -0.66
CNN3-207ENST00000545882 RPL13AP40429 203 aaKnown RBP10.93□□□□□ -0.66
CNN3-207ENST00000545882 NTM-AS1Q6ZSK4 140 aa10.93□□□□□ -0.66
CNN3-207ENST00000545882 FAM19A3Q7Z5A8 133 aa10.93□□□□□ -0.66
CNN3-207ENST00000545882 CLEC2BQ92478 149 aa10.93□□□□□ -0.66
CNN3-207ENST00000545882 EPG5Q9HCE0 2579 aa10.93□□□□□ -0.66
CNN3-207ENST00000545882 MYO9AB2RTY4 2548 aa10.93□□□□□ -0.66
CNN3-207ENST00000545882 WNK1Q9H4A3 2382 aa10.92□□□□□ -0.66
CNN3-207ENST00000545882 TRGV1A0A0A0MS02 117 aa10.92□□□□□ -0.66
CNN3-207ENST00000545882 DGAT2L7PQ6IED9 249 aa10.92□□□□□ -0.66
CNN3-207ENST00000545882 CITED2Q99967 270 aaPredicted RBP10.92□□□□□ -0.66
CNN3-207ENST00000545882 AKAP9Q99996 3911 aa10.92□□□□□ -0.66
CNN3-207ENST00000545882 CITED1Q99966 193 aa10.92□□□□□ -0.66
CNN3-207ENST00000545882 CHD6Q8TD26 2715 aa10.91□□□□□ -0.66
CNN3-207ENST00000545882 TRAV25A0A0B4J276 109 aa10.91□□□□□ -0.66
CNN3-207ENST00000545882 Q6ZTI0 123 aa10.91□□□□□ -0.66
CNN3-207ENST00000545882 STHQ8IWL8 128 aa10.91□□□□□ -0.66
CNN3-207ENST00000545882 WFDC11Q8NEX6 87 aa10.91□□□□□ -0.66
CNN3-207ENST00000545882 HERVK_113P63121 156 aa10.9□□□□□ -0.66
CNN3-207ENST00000545882 Q9H8V8 135 aa10.9□□□□□ -0.66
CNN3-207ENST00000545882 SMIM1B2RUZ4 78 aa10.9□□□□□ -0.67
CNN3-207ENST00000545882 LST1O00453 97 aa10.9□□□□□ -0.67
CNN3-207ENST00000545882 C2orf82Q6UX34 121 aa10.9□□□□□ -0.67
CNN3-207ENST00000545882 LINC00308Q8TCZ7 52 aa10.9□□□□□ -0.67
CNN3-207ENST00000545882 K7EQD1 137 aa10.89□□□□□ -0.67
CNN3-207ENST00000545882 C11orf44Q8N8P7 122 aa10.89□□□□□ -0.67
CNN3-207ENST00000545882 CSDC2Q9Y534 153 aaKnown RBP10.89□□□□□ -0.67
CNN3-207ENST00000545882 COX6CP09669 75 aa10.88□□□□□ -0.67
CNN3-207ENST00000545882 SOSTDC1Q6X4U4 206 aa10.88□□□□□ -0.67
CNN3-207ENST00000545882 TEX29Q8N6K0 151 aa10.88□□□□□ -0.67
CNN3-207ENST00000545882 UBE2WQ96B02 151 aa10.88□□□□□ -0.67
CNN3-207ENST00000545882 ZNF625Q96I27 306 aaPredicted RBP10.88□□□□□ -0.67
CNN3-207ENST00000545882 ITPR3Q14573 2671 aa10.88□□□□□ -0.67
CNN3-207ENST00000545882 A0A1W2PRX2 142 aa10.88□□□□□ -0.67
CNN3-207ENST00000545882 DNAJC9-AS1A6NH13 148 aa10.88□□□□□ -0.67
CNN3-207ENST00000545882 F5H768 121 aa10.88□□□□□ -0.67
CNN3-207ENST00000545882 H3BT86 120 aa10.88□□□□□ -0.67
CNN3-207ENST00000545882 RPL36AP83881 106 aaKnown RBP10.88□□□□□ -0.67
CNN3-207ENST00000545882 RPL36ALQ969Q0 106 aaKnown RBP10.88□□□□□ -0.67
CNN3-207ENST00000545882 TRBV10-1A0A0K0K1A3 114 aa10.87□□□□□ -0.67
CNN3-207ENST00000545882 CRLF1O75462 422 aa10.87□□□□□ -0.67
CNN3-207ENST00000545882 CDC42SE2Q9NRR3 84 aa10.87□□□□□ -0.67
CNN3-207ENST00000545882 TRAV13-1A0A0B4J241 112 aa10.86□□□□□ -0.67
CNN3-207ENST00000545882 TRAV4A0A0B4J268 109 aa10.86□□□□□ -0.67
CNN3-207ENST00000545882 A0A0U1RRA0 63 aa10.86□□□□□ -0.67
CNN3-207ENST00000545882 GIG44P09565 113 aaPredicted RBP10.86□□□□□ -0.67
CNN3-207ENST00000545882 DAZ2Q13117 558 aaKnown RBP10.86□□□□□ -0.67
CNN3-207ENST00000545882 CIRBPQ14011 172 aaKnown RBP10.86□□□□□ -0.67
CNN3-207ENST00000545882 DAZ4Q86SG3 579 aaKnown RBP10.86□□□□□ -0.67
CNN3-207ENST00000545882 DAZ3Q9NR90 486 aaKnown RBP10.86□□□□□ -0.67
CNN3-207ENST00000545882 TRAV8-4A0A0B4J246 113 aa10.86□□□□□ -0.67
CNN3-207ENST00000545882 GAGE12JA6NER3 117 aa10.86□□□□□ -0.67
CNN3-207ENST00000545882 CCL24O00175 119 aa10.86□□□□□ -0.67
CNN3-207ENST00000545882 GAGE4Q13068 117 aa10.86□□□□□ -0.67
CNN3-207ENST00000545882 GAGE5Q13069 117 aa10.86□□□□□ -0.67
CNN3-207ENST00000545882 TRAV26-1A0A087WT03 109 aa10.85□□□□□ -0.67
CNN3-207ENST00000545882 ESM1Q9NQ30 184 aa10.85□□□□□ -0.67
CNN3-207ENST00000545882 TLN2Q9Y4G6 2542 aa10.84□□□□□ -0.67
CNN3-207ENST00000545882 PLAC8L1A1L4L8 177 aa10.84□□□□□ -0.67
CNN3-207ENST00000545882 KRTAP1-1Q07627 177 aa10.84□□□□□ -0.67
CNN3-207ENST00000545882 NOP10Q9NPE3 64 aaKnown RBP10.84□□□□□ -0.67
CNN3-207ENST00000545882 DEFB121Q5J5C9 76 aa10.84□□□□□ -0.67
CNN3-207ENST00000545882 TENM4Q6N022 2769 aa10.83□□□□□ -0.68
CNN3-207ENST00000545882 CUBNO60494 3623 aa10.83□□□□□ -0.68
CNN3-207ENST00000545882 HIST2H2BCQ6DN03 193 aa10.82□□□□□ -0.68
CNN3-207ENST00000545882 SHISA2Q6UWI4 295 aa10.82□□□□□ -0.68
CNN3-207ENST00000545882 NOTCH3Q9UM47 2321 aa10.82□□□□□ -0.68
CNN3-207ENST00000545882 SONP18583 2426 aaKnown RBP10.81□□□□□ -0.68
CNN3-207ENST00000545882 LOC100131303A0A0U1RQF7 123 aa10.81□□□□□ -0.68
CNN3-207ENST00000545882 PRIMA1Q86XR5 153 aa10.81□□□□□ -0.68
CNN3-207ENST00000545882 WFDC10AQ9H1F0 79 aa10.81□□□□□ -0.68
CNN3-207ENST00000545882 PDZD2O15018 2839 aa10.8□□□□□ -0.68
CNN3-207ENST00000545882 SNCGO76070 127 aa10.8□□□□□ -0.68
CNN3-207ENST00000545882 NHLRC4P0CG21 123 aaPredicted RBP10.8□□□□□ -0.68
CNN3-207ENST00000545882 C15orf53Q8NAA6 179 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 281.5 ms