RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 IGHV3OR16-12A0A075B7B8 117 aa3.61□□□□□ -1.83
UBE4A-203ENST00000545354 IGKV1-12A0A0C4DH73 117 aa3.61□□□□□ -1.83
UBE4A-203ENST00000545354 C17orf98A8MV24 154 aa3.61□□□□□ -1.83
UBE4A-203ENST00000545354 BPY2O14599 106 aa3.61□□□□□ -1.83
UBE4A-203ENST00000545354 IGKV1D-12P01611 117 aa3.61□□□□□ -1.83
UBE4A-203ENST00000545354 Q9BRP9 147 aa3.61□□□□□ -1.83
UBE4A-203ENST00000545354 CYSRT1A8MQ03 144 aa3.6□□□□□ -1.83
UBE4A-203ENST00000545354 IGLV2-11P01706 119 aa3.6□□□□□ -1.83
UBE4A-203ENST00000545354 MOBPQ13875 183 aa3.6□□□□□ -1.83
UBE4A-203ENST00000545354 ERHP84090 104 aaKnown RBP3.59□□□□□ -1.83
UBE4A-203ENST00000545354 KRTAP9-9Q9BYP9 154 aa3.59□□□□□ -1.83
UBE4A-203ENST00000545354 KRTAP9-4Q9BYQ2 154 aa3.59□□□□□ -1.83
UBE4A-203ENST00000545354 C22orf24Q9Y442 160 aa3.59□□□□□ -1.83
UBE4A-203ENST00000545354 CNOT1A5YKK6 2376 aaKnown RBP3.59□□□□□ -1.83
UBE4A-203ENST00000545354 LINC01547P58512 204 aaPredicted RBP3.59□□□□□ -1.84
UBE4A-203ENST00000545354 TSPEAR-AS2P59090 65 aa3.59□□□□□ -1.84
UBE4A-203ENST00000545354 Q6ZPA2 131 aa3.59□□□□□ -1.84
UBE4A-203ENST00000545354 C17orf82Q86X59 251 aaPredicted RBP3.59□□□□□ -1.84
UBE4A-203ENST00000545354 BBC3Q96PG8 261 aaPredicted RBP3.59□□□□□ -1.84
UBE4A-203ENST00000545354 LITAFQ99732 161 aa3.59□□□□□ -1.84
UBE4A-203ENST00000545354 PRR15LQ9BU68 103 aa3.59□□□□□ -1.84
UBE4A-203ENST00000545354 EML5Q05BV3 1969 aa3.59□□□□□ -1.84
UBE4A-203ENST00000545354 AKAP13Q12802 2813 aa3.58□□□□□ -1.84
UBE4A-203ENST00000545354 IGHV1OR15-1A0A075B7D0 117 aa3.58□□□□□ -1.84
UBE4A-203ENST00000545354 KRTAP16-1A8MUX0 517 aa3.58□□□□□ -1.84
UBE4A-203ENST00000545354 IGLV3-19P01714 112 aa3.58□□□□□ -1.84
UBE4A-203ENST00000545354 IGHV3-48P01763 117 aa3.58□□□□□ -1.84
UBE4A-203ENST00000545354 PRCDQ00LT1 54 aa3.58□□□□□ -1.84
UBE4A-203ENST00000545354 ABCA7Q8IZY2 2146 aa3.58□□□□□ -1.84
UBE4A-203ENST00000545354 Q8N814 137 aa3.58□□□□□ -1.84
UBE4A-203ENST00000545354 Q8N9P0 234 aaPredicted RBP3.58□□□□□ -1.84
UBE4A-203ENST00000545354 IGSF10Q6WRI0 2623 aa3.58□□□□□ -1.84
UBE4A-203ENST00000545354 CELSR3Q9NYQ7 3312 aa3.58□□□□□ -1.84
UBE4A-203ENST00000545354 LOC110117498A0A087WWA1 95 aa3.58□□□□□ -1.84
UBE4A-203ENST00000545354 IGLV9-49A0A0B4J1Y8 123 aa3.58□□□□□ -1.84
UBE4A-203ENST00000545354 TRAV10A0A0B4J240 114 aa3.58□□□□□ -1.84
UBE4A-203ENST00000545354 IGKV3D-20A0A0C4DH25 116 aa3.58□□□□□ -1.84
UBE4A-203ENST00000545354 LHBP01229 141 aa3.58□□□□□ -1.84
UBE4A-203ENST00000545354 IGLV3-21P80748 117 aaPredicted RBP3.58□□□□□ -1.84
UBE4A-203ENST00000545354 DEFB114Q30KQ6 69 aa3.58□□□□□ -1.84
UBE4A-203ENST00000545354 SPANXA2-OT1Q8N9U9 137 aa3.58□□□□□ -1.84
UBE4A-203ENST00000545354 SND1-IT1Q9HBX3 110 aa3.58□□□□□ -1.84
UBE4A-203ENST00000545354 LAMA1P25391 3075 aa3.57□□□□□ -1.84
UBE4A-203ENST00000545354 TRBV6-5A0A0K0K1A5 114 aa3.57□□□□□ -1.84
UBE4A-203ENST00000545354 LCE6AA0A183 80 aa3.57□□□□□ -1.84
UBE4A-203ENST00000545354 CTSGP08311 255 aa3.57□□□□□ -1.84
UBE4A-203ENST00000545354 GNLYP22749 145 aa3.57□□□□□ -1.84
UBE4A-203ENST00000545354 Q6ZS52 159 aa3.57□□□□□ -1.84
UBE4A-203ENST00000545354 FREM3P0C091 2139 aa3.57□□□□□ -1.84
UBE4A-203ENST00000545354 TENM4Q6N022 2769 aa3.57□□□□□ -1.84
UBE4A-203ENST00000545354 KALRNO60229 2985 aa3.57□□□□□ -1.84
UBE4A-203ENST00000545354 SHANK1Q9Y566 2161 aa3.57□□□□□ -1.84
UBE4A-203ENST00000545354 NACAE9PAV3 2078 aa3.57□□□□□ -1.84
UBE4A-203ENST00000545354 IGHV7-81A0A0B4J1V7 117 aa3.56□□□□□ -1.84
UBE4A-203ENST00000545354 IGHV3-35A0A0C4DH35 117 aa3.56□□□□□ -1.84
UBE4A-203ENST00000545354 LY6HO94772 140 aa3.56□□□□□ -1.84
UBE4A-203ENST00000545354 SPTBP11277 2137 aa3.56□□□□□ -1.84
UBE4A-203ENST00000545354 RPL36AP83881 106 aaKnown RBP3.56□□□□□ -1.84
UBE4A-203ENST00000545354 CABIN1Q9Y6J0 2220 aa3.56□□□□□ -1.84
UBE4A-203ENST00000545354 MYO7BQ6PIF6 2116 aa3.56□□□□□ -1.84
UBE4A-203ENST00000545354 IGLV1-51P01701 117 aa3.56□□□□□ -1.84
UBE4A-203ENST00000545354 IGHV1-2P23083 117 aa3.56□□□□□ -1.84
UBE4A-203ENST00000545354 CD52P31358 61 aa3.56□□□□□ -1.84
UBE4A-203ENST00000545354 SPINK9Q5DT21 86 aa3.56□□□□□ -1.84
UBE4A-203ENST00000545354 LINC00476Q8WZB0 136 aa3.56□□□□□ -1.84
UBE4A-203ENST00000545354 ZNF625Q96I27 306 aaPredicted RBP3.56□□□□□ -1.84
UBE4A-203ENST00000545354 SMIM14Q96QK8 99 aa3.56□□□□□ -1.84
UBE4A-203ENST00000545354 OCR1Q9BZK8 76 aa3.56□□□□□ -1.84
UBE4A-203ENST00000545354 S4R3C0 116 aa3.56□□□□□ -1.84
UBE4A-203ENST00000545354 MYO18BQ8IUG5 2567 aa3.56□□□□□ -1.84
UBE4A-203ENST00000545354 HECTD1Q9ULT8 2610 aa3.56□□□□□ -1.84
UBE4A-203ENST00000545354 CACNA1IQ9P0X4 2223 aa3.56□□□□□ -1.84
UBE4A-203ENST00000545354 COL4A3Q01955 1670 aa3.55□□□□□ -1.84
UBE4A-203ENST00000545354 LY6G6EA0A0G2JKS1 128 aa3.55□□□□□ -1.84
UBE4A-203ENST00000545354 CRPP02741 224 aa3.55□□□□□ -1.84
UBE4A-203ENST00000545354 MSMBP08118 114 aa3.55□□□□□ -1.84
UBE4A-203ENST00000545354 IGHV3-30-3P0DP02 117 aa3.55□□□□□ -1.84
UBE4A-203ENST00000545354 CRIP1P50238 77 aa3.55□□□□□ -1.84
UBE4A-203ENST00000545354 HAMPP81172 84 aa3.55□□□□□ -1.84
UBE4A-203ENST00000545354 B9D2Q9BPU9 175 aa3.55□□□□□ -1.84
UBE4A-203ENST00000545354 NDUFA4L2Q9NRX3 87 aa3.55□□□□□ -1.84
UBE4A-203ENST00000545354 USP9XQ93008 2570 aaPredicted RBP3.55□□□□□ -1.84
UBE4A-203ENST00000545354 IGKV1OR2-108A0A075B7D4 117 aa3.55□□□□□ -1.84
UBE4A-203ENST00000545354 IGHV3-20A0A0C4DH32 117 aa3.55□□□□□ -1.84
UBE4A-203ENST00000545354 PCNX2A6NKB5 2137 aa3.55□□□□□ -1.84
UBE4A-203ENST00000545354 LY6G6DO95868 133 aa3.55□□□□□ -1.84
UBE4A-203ENST00000545354 PRB4P10163 310 aaPredicted RBP3.55□□□□□ -1.84
UBE4A-203ENST00000545354 REG3AQ06141 175 aa3.55□□□□□ -1.84
UBE4A-203ENST00000545354 MIR7-3HGQ8N6C7 128 aa3.55□□□□□ -1.84
UBE4A-203ENST00000545354 CNEP1R1Q8N9A8 125 aa3.55□□□□□ -1.84
UBE4A-203ENST00000545354 LINC00308Q8TCZ7 52 aa3.55□□□□□ -1.84
UBE4A-203ENST00000545354 C10orf142B7Z368 130 aa3.54□□□□□ -1.84
UBE4A-203ENST00000545354 H3BPC8 53 aa3.54□□□□□ -1.84
UBE4A-203ENST00000545354 NDUFA1O15239 70 aa3.54□□□□□ -1.84
UBE4A-203ENST00000545354 WFDC9Q8NEX5 89 aa3.54□□□□□ -1.84
UBE4A-203ENST00000545354 LINC00208Q96KT6 92 aa3.54□□□□□ -1.84
UBE4A-203ENST00000545354 LINC00167Q96N53 147 aa3.54□□□□□ -1.84
UBE4A-203ENST00000545354 MPDZO75970 2070 aa3.54□□□□□ -1.84
UBE4A-203ENST00000545354 CFAP46Q8IYW2 2715 aa3.53□□□□□ -1.84
UBE4A-203ENST00000545354 IGHV1-18A0A0C4DH31 117 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms