RNA–Protein interactions for RNA: ENST00000545042.1

DDX55-213, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-213ENST00000545042 MRPL52Q86TS9 123 aaKnown RBP8.65□□□□□ -1.02
DDX55-213ENST00000545042 AP5S1Q9NUS5 200 aa8.65□□□□□ -1.02
DDX55-213ENST00000545042 FAM30AQ9NZY2 134 aa8.65□□□□□ -1.02
DDX55-213ENST00000545042 hDV102S1A0JD36 115 aa8.64□□□□□ -1.03
DDX55-213ENST00000545042 TMEM218A2RU14 115 aa8.64□□□□□ -1.03
DDX55-213ENST00000545042 PHOX2AO14813 284 aa8.64□□□□□ -1.03
DDX55-213ENST00000545042 HAMPP81172 84 aa8.64□□□□□ -1.03
DDX55-213ENST00000545042 Q6ZSA8 131 aa8.64□□□□□ -1.03
DDX55-213ENST00000545042 ORMDL3Q8N138 153 aa8.64□□□□□ -1.03
DDX55-213ENST00000545042 CHCHD10Q8WYQ3 142 aaPredicted RBP8.64□□□□□ -1.03
DDX55-213ENST00000545042 ABCA13Q86UQ4 5058 aa8.63□□□□□ -1.03
DDX55-213ENST00000545042 FAM229AH3BQW9 127 aa8.63□□□□□ -1.03
DDX55-213ENST00000545042 SMR3BP02814 79 aaPredicted RBP8.63□□□□□ -1.03
DDX55-213ENST00000545042 SS18Q15532 418 aa8.63□□□□□ -1.03
DDX55-213ENST00000545042 TMEM136Q6ZRR5 245 aa8.63□□□□□ -1.03
DDX55-213ENST00000545042 ZNF664Q8N3J9 261 aa8.63□□□□□ -1.03
DDX55-213ENST00000545042 SMIM2Q9BVW6 85 aa8.63□□□□□ -1.03
DDX55-213ENST00000545042 NPYP01303 97 aa8.62□□□□□ -1.03
DDX55-213ENST00000545042 Q5VSD8 79 aa8.62□□□□□ -1.03
DDX55-213ENST00000545042 COMMD7Q86VX2 200 aa8.62□□□□□ -1.03
DDX55-213ENST00000545042 PRELID3AQ96N28 172 aa8.62□□□□□ -1.03
DDX55-213ENST00000545042 IMMP2LQ96T52 175 aa8.62□□□□□ -1.03
DDX55-213ENST00000545042 CTDSP1Q9GZU7 261 aa8.62□□□□□ -1.03
DDX55-213ENST00000545042 CDC42SE2Q9NRR3 84 aa8.62□□□□□ -1.03
DDX55-213ENST00000545042 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.61□□□□□ -1.03
DDX55-213ENST00000545042 LINC00959A0A1B0GUT2 108 aa8.61□□□□□ -1.03
DDX55-213ENST00000545042 ADCYAP1P18509 176 aa8.61□□□□□ -1.03
DDX55-213ENST00000545042 XCL1P47992 114 aa8.61□□□□□ -1.03
DDX55-213ENST00000545042 C9orf163Q8N9P6 203 aa8.61□□□□□ -1.03
DDX55-213ENST00000545042 SEC11CQ9BY50 192 aa8.61□□□□□ -1.03
DDX55-213ENST00000545042 LAMTOR2Q9Y2Q5 125 aa8.61□□□□□ -1.03
DDX55-213ENST00000545042 CSDC2Q9Y534 153 aaKnown RBP8.61□□□□□ -1.03
DDX55-213ENST00000545042 CCL25O15444 150 aa8.6□□□□□ -1.03
DDX55-213ENST00000545042 RAB5AP20339 215 aa8.6□□□□□ -1.03
DDX55-213ENST00000545042 CNBPP62633 177 aaKnown RBP8.6□□□□□ -1.03
DDX55-213ENST00000545042 TIMM21Q9BVV7 248 aa8.6□□□□□ -1.03
DDX55-213ENST00000545042 UBE2D4Q9Y2X8 147 aa8.6□□□□□ -1.03
DDX55-213ENST00000545042 CHAC1Q9BUX1 264 aa8.59□□□□□ -1.03
DDX55-213ENST00000545042 C1orf196B1AJZ1 125 aa8.58□□□□□ -1.04
DDX55-213ENST00000545042 S100PP25815 95 aa8.58□□□□□ -1.04
DDX55-213ENST00000545042 FOXI1Q12951 378 aa8.58□□□□□ -1.04
DDX55-213ENST00000545042 CD164L2Q6UWJ8 174 aa8.58□□□□□ -1.04
DDX55-213ENST00000545042 SCXQ7RTU7 201 aa8.58□□□□□ -1.04
DDX55-213ENST00000545042 C15orf56Q8N910 161 aa8.58□□□□□ -1.04
DDX55-213ENST00000545042 MAP1LC3AQ9H492 121 aa8.58□□□□□ -1.04
DDX55-213ENST00000545042 IGHV3-64A0A075B6Q5 118 aa8.57□□□□□ -1.04
DDX55-213ENST00000545042 TRAV9-1A0A075B6T8 112 aa8.57□□□□□ -1.04
DDX55-213ENST00000545042 HIGD2BQ4VC39 106 aa8.57□□□□□ -1.04
DDX55-213ENST00000545042 SPANXA1Q9NS26 97 aa8.57□□□□□ -1.04
DDX55-213ENST00000545042 DNAH8Q96JB1 4490 aa8.56□□□□□ -1.04
DDX55-213ENST00000545042 GVQW2A0A096LPI5 108 aaPredicted RBP8.56□□□□□ -1.04
DDX55-213ENST00000545042 TRAV13-1A0A0B4J241 112 aa8.56□□□□□ -1.04
DDX55-213ENST00000545042 IGHV1-58A0A0C4DH39 117 aa8.56□□□□□ -1.04
DDX55-213ENST00000545042 LOC389332A0A1B0GUA5 103 aa8.56□□□□□ -1.04
DDX55-213ENST00000545042 PLA2G1BP04054 148 aaKnown RBP8.56□□□□□ -1.04
DDX55-213ENST00000545042 RPL39P62891 51 aaKnown RBP8.56□□□□□ -1.04
DDX55-213ENST00000545042 RNASE13Q5GAN3 156 aaKnown RBP8.56□□□□□ -1.04
DDX55-213ENST00000545042 Q6ZUT4 128 aa8.56□□□□□ -1.04
DDX55-213ENST00000545042 PRSS47A8MTI9 375 aa8.55□□□□□ -1.04
DDX55-213ENST00000545042 INAFM2P0DMQ5 153 aa8.55□□□□□ -1.04
DDX55-213ENST00000545042 MALP21145 153 aa8.55□□□□□ -1.04
DDX55-213ENST00000545042 SDIM1Q6ZPB5 146 aa8.55□□□□□ -1.04
DDX55-213ENST00000545042 LINC00528Q8N1L1 170 aa8.55□□□□□ -1.04
DDX55-213ENST00000545042 CIRBP-AS1Q8TBR5 109 aa8.55□□□□□ -1.04
DDX55-213ENST00000545042 COX7A2LO14548 114 aa8.54□□□□□ -1.04
DDX55-213ENST00000545042 IFI27P40305 119 aaPredicted RBP8.54□□□□□ -1.04
DDX55-213ENST00000545042 MRPS36P82909 103 aaKnown RBP8.54□□□□□ -1.04
DDX55-213ENST00000545042 Q8N8P6 123 aa8.54□□□□□ -1.04
DDX55-213ENST00000545042 ZNF561-AS1K7EIQ3 104 aa8.53□□□□□ -1.04
DDX55-213ENST00000545042 SLPIP03973 132 aa8.53□□□□□ -1.04
DDX55-213ENST00000545042 RHEBQ15382 184 aa8.53□□□□□ -1.04
DDX55-213ENST00000545042 C10orf91Q5T1B1 145 aa8.53□□□□□ -1.04
DDX55-213ENST00000545042 DPH3Q96FX2 82 aa8.53□□□□□ -1.04
DDX55-213ENST00000545042 CARHSP1Q9Y2V2 147 aaKnown RBP8.53□□□□□ -1.04
DDX55-213ENST00000545042 FAT1Q14517 4588 aa8.53□□□□□ -1.04
DDX55-213ENST00000545042 K7EMI3 77 aa8.52□□□□□ -1.05
DDX55-213ENST00000545042 ORMDL2Q53FV1 153 aa8.52□□□□□ -1.05
DDX55-213ENST00000545042 NXT2Q9NPJ8 142 aaKnown RBP8.52□□□□□ -1.05
DDX55-213ENST00000545042 RPS10P5Q9NQ39 176 aa8.52□□□□□ -1.05
DDX55-213ENST00000545042 PKIGQ9Y2B9 76 aa8.52□□□□□ -1.05
DDX55-213ENST00000545042 VPS13BQ7Z7G8 4022 aa8.52□□□□□ -1.05
DDX55-213ENST00000545042 IFITM10A6NMD0 228 aa8.51□□□□□ -1.05
DDX55-213ENST00000545042 APOMO95445 188 aa8.51□□□□□ -1.05
DDX55-213ENST00000545042 G0S2P27469 103 aa8.51□□□□□ -1.05
DDX55-213ENST00000545042 NDUFA5Q16718 116 aa8.51□□□□□ -1.05
DDX55-213ENST00000545042 COX19Q49B96 90 aa8.51□□□□□ -1.05
DDX55-213ENST00000545042 GNB1LQ9BYB4 327 aa8.51□□□□□ -1.05
DDX55-213ENST00000545042 CYSLTR1Q9Y271 337 aa8.51□□□□□ -1.05
DDX55-213ENST00000545042 PYGO1Q9Y3Y4 419 aa8.51□□□□□ -1.05
DDX55-213ENST00000545042 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.51□□□□□ -1.05
DDX55-213ENST00000545042 SRRM2Q9UQ35 2752 aaKnown RBP8.51□□□□□ -1.05
DDX55-213ENST00000545042 CARD19Q96LW7 228 aa8.5□□□□□ -1.05
DDX55-213ENST00000545042 OPRPNQ99935 248 aaPredicted RBP8.5□□□□□ -1.05
DDX55-213ENST00000545042 COX6A2Q02221 97 aa8.49□□□□□ -1.05
DDX55-213ENST00000545042 KIAA1644Q3SXP7 199 aa8.49□□□□□ -1.05
DDX55-213ENST00000545042 C2orf66Q6UXQ4 117 aa8.49□□□□□ -1.05
DDX55-213ENST00000545042 Q6ZN92 141 aa8.49□□□□□ -1.05
DDX55-213ENST00000545042 C5orf38Q86SI9 138 aa8.49□□□□□ -1.05
DDX55-213ENST00000545042 LINC00526Q96FQ7 95 aa8.49□□□□□ -1.05
DDX55-213ENST00000545042 TMEM141Q96I45 108 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms