RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 CHCHD10Q8WYQ3 142 aaPredicted RBP7.24□□□□□ -1.25
DDB1-222ENST00000543627 TMEM18Q96B42 140 aa7.24□□□□□ -1.25
DDB1-222ENST00000543627 CTDSP1Q9GZU7 261 aa7.24□□□□□ -1.25
DDB1-222ENST00000543627 RPS10P5Q9NQ39 176 aa7.24□□□□□ -1.25
DDB1-222ENST00000543627 TRBV24-1A0A075B6N3 115 aa7.23□□□□□ -1.25
DDB1-222ENST00000543627 PRSS1P07477 247 aa7.23□□□□□ -1.25
DDB1-222ENST00000543627 S100PP25815 95 aa7.23□□□□□ -1.25
DDB1-222ENST00000543627 XGP55808 180 aa7.23□□□□□ -1.25
DDB1-222ENST00000543627 SS18Q15532 418 aa7.23□□□□□ -1.25
DDB1-222ENST00000543627 KRTAP26-1Q6PEX3 210 aa7.23□□□□□ -1.25
DDB1-222ENST00000543627 SMIM2Q9BVW6 85 aa7.23□□□□□ -1.25
DDB1-222ENST00000543627 FAM30AQ9NZY2 134 aa7.23□□□□□ -1.25
DDB1-222ENST00000543627 SMAGPQ0VAQ4 97 aa7.22□□□□□ -1.25
DDB1-222ENST00000543627 KIAA1644Q3SXP7 199 aa7.22□□□□□ -1.25
DDB1-222ENST00000543627 HIGD2BQ4VC39 106 aa7.22□□□□□ -1.25
DDB1-222ENST00000543627 ZNF664Q8N3J9 261 aa7.22□□□□□ -1.25
DDB1-222ENST00000543627 CDC42SE2Q9NRR3 84 aa7.22□□□□□ -1.25
DDB1-222ENST00000543627 AP5S1Q9NUS5 200 aa7.22□□□□□ -1.25
DDB1-222ENST00000543627 RYR1P21817 5038 aa7.22□□□□□ -1.25
DDB1-222ENST00000543627 APOBP04114 4563 aaKnown RBP7.21□□□□□ -1.25
DDB1-222ENST00000543627 TRAV13-1A0A0B4J241 112 aa7.21□□□□□ -1.26
DDB1-222ENST00000543627 LINC00959A0A1B0GUT2 108 aa7.21□□□□□ -1.26
DDB1-222ENST00000543627 CCL25O15444 150 aa7.21□□□□□ -1.26
DDB1-222ENST00000543627 APOC3P02656 99 aa7.21□□□□□ -1.26
DDB1-222ENST00000543627 RPL39P62891 51 aaKnown RBP7.21□□□□□ -1.26
DDB1-222ENST00000543627 CFAP161Q6P656 301 aa7.21□□□□□ -1.26
DDB1-222ENST00000543627 IMMP2LQ96T52 175 aa7.21□□□□□ -1.26
DDB1-222ENST00000543627 KRTAP4-5Q9BYR2 181 aa7.21□□□□□ -1.26
DDB1-222ENST00000543627 MAP1LC3AQ9H492 121 aa7.21□□□□□ -1.26
DDB1-222ENST00000543627 HSPG2P98160 4391 aa7.2□□□□□ -1.26
DDB1-222ENST00000543627 PHOX2AO14813 284 aa7.2□□□□□ -1.26
DDB1-222ENST00000543627 MRPL52Q86TS9 123 aaKnown RBP7.2□□□□□ -1.26
DDB1-222ENST00000543627 Q8N1X5 172 aa7.2□□□□□ -1.26
DDB1-222ENST00000543627 CLRN3Q8NCR9 226 aa7.2□□□□□ -1.26
DDB1-222ENST00000543627 DPH3Q96FX2 82 aa7.2□□□□□ -1.26
DDB1-222ENST00000543627 TMA7Q9Y2S6 64 aaKnown RBP7.2□□□□□ -1.26
DDB1-222ENST00000543627 UBE2D4Q9Y2X8 147 aa7.2□□□□□ -1.26
DDB1-222ENST00000543627 EPM2AB3EWF7 344 aa7.19□□□□□ -1.26
DDB1-222ENST00000543627 Q6ZUT4 128 aa7.19□□□□□ -1.26
DDB1-222ENST00000543627 OPRPNQ99935 248 aaPredicted RBP7.19□□□□□ -1.26
DDB1-222ENST00000543627 MALP21145 153 aa7.18□□□□□ -1.26
DDB1-222ENST00000543627 RPL32P62910 135 aaKnown RBP7.18□□□□□ -1.26
DDB1-222ENST00000543627 NDUFA5Q16718 116 aa7.18□□□□□ -1.26
DDB1-222ENST00000543627 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.17□□□□□ -1.26
DDB1-222ENST00000543627 FAM229AH3BQW9 127 aa7.17□□□□□ -1.26
DDB1-222ENST00000543627 FABP9Q0Z7S8 132 aa7.17□□□□□ -1.26
DDB1-222ENST00000543627 FOXI1Q12951 378 aa7.17□□□□□ -1.26
DDB1-222ENST00000543627 RHEBQ15382 184 aa7.17□□□□□ -1.26
DDB1-222ENST00000543627 C10orf91Q5T1B1 145 aa7.17□□□□□ -1.26
DDB1-222ENST00000543627 LINC00526Q96FQ7 95 aa7.17□□□□□ -1.26
DDB1-222ENST00000543627 LAMTOR2Q9Y2Q5 125 aa7.17□□□□□ -1.26
DDB1-222ENST00000543627 CARHSP1Q9Y2V2 147 aaKnown RBP7.17□□□□□ -1.26
DDB1-222ENST00000543627 TRAV9-1A0A075B6T8 112 aa7.16□□□□□ -1.26
DDB1-222ENST00000543627 C1orf196B1AJZ1 125 aa7.16□□□□□ -1.26
DDB1-222ENST00000543627 IFI27P40305 119 aaPredicted RBP7.16□□□□□ -1.26
DDB1-222ENST00000543627 Q5VSD8 79 aa7.16□□□□□ -1.26
DDB1-222ENST00000543627 CD164L2Q6UWJ8 174 aa7.16□□□□□ -1.26
DDB1-222ENST00000543627 C5orf38Q86SI9 138 aa7.16□□□□□ -1.26
DDB1-222ENST00000543627 Q8N8P6 123 aa7.16□□□□□ -1.26
DDB1-222ENST00000543627 C15orf56Q8N910 161 aa7.16□□□□□ -1.26
DDB1-222ENST00000543627 PRSS3P2Q8NHM4 247 aa7.16□□□□□ -1.26
DDB1-222ENST00000543627 CSDC2Q9Y534 153 aaKnown RBP7.16□□□□□ -1.26
DDB1-222ENST00000543627 IFITM10A6NMD0 228 aa7.15□□□□□ -1.26
DDB1-222ENST00000543627 C9orf163Q8N9P6 203 aa7.15□□□□□ -1.26
DDB1-222ENST00000543627 TIMM21Q9BVV7 248 aa7.15□□□□□ -1.26
DDB1-222ENST00000543627 MRPL18Q9H0U6 180 aaKnown RBP7.15□□□□□ -1.26
DDB1-222ENST00000543627 SPANXA1Q9NS26 97 aa7.15□□□□□ -1.26
DDB1-222ENST00000543627 IGHV3-64A0A075B6Q5 118 aa7.14□□□□□ -1.27
DDB1-222ENST00000543627 TGIF2-C20orf24A0A0A6YYL0 155 aa7.14□□□□□ -1.27
DDB1-222ENST00000543627 IGHV1-58A0A0C4DH39 117 aa7.14□□□□□ -1.27
DDB1-222ENST00000543627 ZNF561-AS1K7EIQ3 104 aa7.14□□□□□ -1.27
DDB1-222ENST00000543627 COX7A2LO14548 114 aa7.14□□□□□ -1.27
DDB1-222ENST00000543627 SNAPINO95295 136 aa7.14□□□□□ -1.27
DDB1-222ENST00000543627 SLPIP03973 132 aa7.14□□□□□ -1.27
DDB1-222ENST00000543627 ORMDL2Q53FV1 153 aa7.14□□□□□ -1.27
DDB1-222ENST00000543627 SCXQ7RTU7 201 aa7.14□□□□□ -1.27
DDB1-222ENST00000543627 SVBPQ8N300 66 aa7.14□□□□□ -1.27
DDB1-222ENST00000543627 GNB1LQ9BYB4 327 aa7.14□□□□□ -1.27
DDB1-222ENST00000543627 PRSS47A8MTI9 375 aa7.13□□□□□ -1.27
DDB1-222ENST00000543627 ZC2HC1BQ5TFG8 222 aa7.13□□□□□ -1.27
DDB1-222ENST00000543627 C2orf66Q6UXQ4 117 aa7.13□□□□□ -1.27
DDB1-222ENST00000543627 CIRBP-AS1Q8TBR5 109 aa7.13□□□□□ -1.27
DDB1-222ENST00000543627 CHAC1Q9BUX1 264 aa7.13□□□□□ -1.27
DDB1-222ENST00000543627 NXT2Q9NPJ8 142 aaKnown RBP7.13□□□□□ -1.27
DDB1-222ENST00000543627 CYSLTR1Q9Y271 337 aa7.13□□□□□ -1.27
DDB1-222ENST00000543627 TRAPPC1Q9Y5R8 145 aa7.13□□□□□ -1.27
DDB1-222ENST00000543627 CNBPP62633 177 aaKnown RBP7.12□□□□□ -1.27
DDB1-222ENST00000543627 COX6A2Q02221 97 aa7.12□□□□□ -1.27
DDB1-222ENST00000543627 COX19Q49B96 90 aa7.12□□□□□ -1.27
DDB1-222ENST00000543627 Q6ZN92 141 aa7.12□□□□□ -1.27
DDB1-222ENST00000543627 Q6ZSA8 131 aa7.12□□□□□ -1.27
DDB1-222ENST00000543627 SLC7A5P1Q8MH63 180 aa7.12□□□□□ -1.27
DDB1-222ENST00000543627 LINC00528Q8N1L1 170 aa7.12□□□□□ -1.27
DDB1-222ENST00000543627 IGLV4-3A0A075B6K6 122 aa7.11□□□□□ -1.27
DDB1-222ENST00000543627 IGKV2-24A0A0C4DH68 120 aa7.11□□□□□ -1.27
DDB1-222ENST00000543627 APOMO95445 188 aa7.11□□□□□ -1.27
DDB1-222ENST00000543627 CHTF8P0CG12 524 aa7.11□□□□□ -1.27
DDB1-222ENST00000543627 INAFM2P0DMQ5 153 aa7.11□□□□□ -1.27
DDB1-222ENST00000543627 MRPS36P82909 103 aaKnown RBP7.11□□□□□ -1.27
DDB1-222ENST00000543627 TEX43Q6ZNM6 134 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms