RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 GAGE6Q13070 117 aa3.95□□□□□ -1.78
ABCF1-207ENST00000542772 PDZD11Q5EBL8 140 aa3.95□□□□□ -1.78
ABCF1-207ENST00000542772 ENHOQ6UWT2 76 aa3.95□□□□□ -1.78
ABCF1-207ENST00000542772 C2orf66Q6UXQ4 117 aa3.95□□□□□ -1.78
ABCF1-207ENST00000542772 ERASQ7Z444 233 aa3.95□□□□□ -1.78
ABCF1-207ENST00000542772 BAGE3Q86Y29 109 aa3.95□□□□□ -1.78
ABCF1-207ENST00000542772 ZNF664Q8N3J9 261 aa3.95□□□□□ -1.78
ABCF1-207ENST00000542772 Q8N3U1 123 aa3.95□□□□□ -1.78
ABCF1-207ENST00000542772 C10orf126Q8N4M7 172 aa3.95□□□□□ -1.78
ABCF1-207ENST00000542772 Q8N976 141 aa3.95□□□□□ -1.78
ABCF1-207ENST00000542772 CYSLTR1Q9Y271 337 aa3.95□□□□□ -1.78
ABCF1-207ENST00000542772 ALMS1Q8TCU4 4167 aa3.95□□□□□ -1.78
ABCF1-207ENST00000542772 DNAH6Q9C0G6 4158 aa3.95□□□□□ -1.78
ABCF1-207ENST00000542772 CCL25O15444 150 aa3.94□□□□□ -1.78
ABCF1-207ENST00000542772 SERF1AO75920 110 aa3.94□□□□□ -1.78
ABCF1-207ENST00000542772 IGHV3-30P01768 117 aa3.94□□□□□ -1.78
ABCF1-207ENST00000542772 IGHV3-33P01772 117 aa3.94□□□□□ -1.78
ABCF1-207ENST00000542772 IGHV3-30-3P0DP02 117 aa3.94□□□□□ -1.78
ABCF1-207ENST00000542772 IGHV3-30-5P0DP03 117 aa3.94□□□□□ -1.78
ABCF1-207ENST00000542772 TTC32Q5I0X7 151 aa3.94□□□□□ -1.78
ABCF1-207ENST00000542772 KRTAP26-1Q6PEX3 210 aa3.94□□□□□ -1.78
ABCF1-207ENST00000542772 FAM19A3Q7Z5A8 133 aa3.94□□□□□ -1.78
ABCF1-207ENST00000542772 OR5A1Q8NGJ0 315 aa3.94□□□□□ -1.78
ABCF1-207ENST00000542772 TMEM141Q96I45 108 aa3.94□□□□□ -1.78
ABCF1-207ENST00000542772 TMEM101Q96IK0 257 aa3.94□□□□□ -1.78
ABCF1-207ENST00000542772 AMELXQ99217 191 aa3.94□□□□□ -1.78
ABCF1-207ENST00000542772 TIMM17AQ99595 171 aa3.94□□□□□ -1.78
ABCF1-207ENST00000542772 KRTAP1-5Q9BYS1 174 aa3.94□□□□□ -1.78
ABCF1-207ENST00000542772 SPANXA1Q9NS26 97 aa3.94□□□□□ -1.78
ABCF1-207ENST00000542772 KLK12Q9UKR0 248 aa3.94□□□□□ -1.78
ABCF1-207ENST00000542772 TRAV8-3A0A0A6YYJ7 113 aa3.93□□□□□ -1.78
ABCF1-207ENST00000542772 TRAV8-4A0A0B4J246 113 aa3.93□□□□□ -1.78
ABCF1-207ENST00000542772 HSBP1O75506 76 aa3.93□□□□□ -1.78
ABCF1-207ENST00000542772 HBDP02042 147 aa3.93□□□□□ -1.78
ABCF1-207ENST00000542772 ANGP03950 147 aaKnown RBP3.93□□□□□ -1.78
ABCF1-207ENST00000542772 REG3AQ06141 175 aa3.93□□□□□ -1.78
ABCF1-207ENST00000542772 MIAQ16674 131 aa3.93□□□□□ -1.78
ABCF1-207ENST00000542772 AMMECR1LQ6DCA0 310 aa3.93□□□□□ -1.78
ABCF1-207ENST00000542772 DGAT2L7PQ6IED9 249 aa3.93□□□□□ -1.78
ABCF1-207ENST00000542772 RNASEKQ6P5S7 137 aaKnown RBP3.93□□□□□ -1.78
ABCF1-207ENST00000542772 LINC00269Q8N2A0 174 aa3.93□□□□□ -1.78
ABCF1-207ENST00000542772 PACRGQ96M98 296 aaPredicted RBP3.93□□□□□ -1.78
ABCF1-207ENST00000542772 DNAH17Q9UFH2 4485 aa3.92□□□□□ -1.78
ABCF1-207ENST00000542772 IGLV4-3A0A075B6K6 122 aa3.92□□□□□ -1.78
ABCF1-207ENST00000542772 LINC00959A0A1B0GUT2 108 aa3.92□□□□□ -1.78
ABCF1-207ENST00000542772 PCP4L1A6NKN8 68 aa3.92□□□□□ -1.78
ABCF1-207ENST00000542772 M0R2N4 97 aa3.92□□□□□ -1.78
ABCF1-207ENST00000542772 NDUFA6P56556 154 aa3.92□□□□□ -1.78
ABCF1-207ENST00000542772 Q6ZRN7 208 aaPredicted RBP3.92□□□□□ -1.78
ABCF1-207ENST00000542772 LINC00173Q6ZV60 143 aa3.92□□□□□ -1.78
ABCF1-207ENST00000542772 NFE4Q86UQ8 179 aa3.92□□□□□ -1.78
ABCF1-207ENST00000542772 FAM19A2Q8N3H0 131 aa3.92□□□□□ -1.78
ABCF1-207ENST00000542772 SCGB3A1Q96QR1 104 aa3.92□□□□□ -1.78
ABCF1-207ENST00000542772 OPRPNQ99935 248 aaPredicted RBP3.92□□□□□ -1.78
ABCF1-207ENST00000542772 COX11Q9Y6N1 276 aa3.92□□□□□ -1.78
ABCF1-207ENST00000542772 RYR2Q92736 4967 aa3.92□□□□□ -1.78
ABCF1-207ENST00000542772 DNAH10Q8IVF4 4471 aa3.91□□□□□ -1.78
ABCF1-207ENST00000542772 RYR3Q15413 4870 aa3.91□□□□□ -1.78
ABCF1-207ENST00000542772 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.91□□□□□ -1.78
ABCF1-207ENST00000542772 ATP5LO75964 103 aa3.91□□□□□ -1.78
ABCF1-207ENST00000542772 LEPROTL1O95214 131 aa3.91□□□□□ -1.78
ABCF1-207ENST00000542772 PMCHL1Q16048 86 aa3.91□□□□□ -1.78
ABCF1-207ENST00000542772 PAPPA-AS1Q5QFB9 102 aa3.91□□□□□ -1.78
ABCF1-207ENST00000542772 Q6ZUT4 128 aa3.91□□□□□ -1.78
ABCF1-207ENST00000542772 C6orf223Q8N319 242 aa3.91□□□□□ -1.78
ABCF1-207ENST00000542772 MAPKAPK5-AS1Q8N8E1 139 aa3.91□□□□□ -1.78
ABCF1-207ENST00000542772 UBE2WQ96B02 151 aa3.91□□□□□ -1.78
ABCF1-207ENST00000542772 VCX2Q9H322 139 aa3.91□□□□□ -1.78
ABCF1-207ENST00000542772 TRAV12-1A0A0B4J245 112 aa3.9□□□□□ -1.79
ABCF1-207ENST00000542772 IGHV3OR16-9A0A0B4J2B5 98 aa3.9□□□□□ -1.79
ABCF1-207ENST00000542772 PRSS29PA6NIE9 313 aa3.9□□□□□ -1.79
ABCF1-207ENST00000542772 RTL8CO15255 209 aa3.9□□□□□ -1.79
ABCF1-207ENST00000542772 UBE2D1P51668 147 aa3.9□□□□□ -1.79
ABCF1-207ENST00000542772 PMVKQ15126 192 aa3.9□□□□□ -1.79
ABCF1-207ENST00000542772 SS18Q15532 418 aa3.9□□□□□ -1.79
ABCF1-207ENST00000542772 LINC00242Q5T6M2 205 aa3.9□□□□□ -1.79
ABCF1-207ENST00000542772 C1orf134Q5TEV5 83 aa3.9□□□□□ -1.79
ABCF1-207ENST00000542772 TEX43Q6ZNM6 134 aa3.9□□□□□ -1.79
ABCF1-207ENST00000542772 SPATA12Q7Z6I5 190 aa3.9□□□□□ -1.79
ABCF1-207ENST00000542772 BAALCQ8WXS3 180 aa3.9□□□□□ -1.79
ABCF1-207ENST00000542772 IFI27L1Q96BM0 104 aa3.9□□□□□ -1.79
ABCF1-207ENST00000542772 RMI2Q96E14 147 aa3.9□□□□□ -1.79
ABCF1-207ENST00000542772 TM2D2Q9BX73 214 aa3.9□□□□□ -1.79
ABCF1-207ENST00000542772 CST9LQ9H4G1 147 aa3.9□□□□□ -1.79
ABCF1-207ENST00000542772 LRCOL1A6NCL2 159 aa3.89□□□□□ -1.79
ABCF1-207ENST00000542772 CRPP02741 224 aa3.89□□□□□ -1.79
ABCF1-207ENST00000542772 SEC11AP67812 179 aa3.89□□□□□ -1.79
ABCF1-207ENST00000542772 COX6A2Q02221 97 aa3.89□□□□□ -1.79
ABCF1-207ENST00000542772 RNASE13Q5GAN3 156 aaKnown RBP3.89□□□□□ -1.79
ABCF1-207ENST00000542772 ZC2HC1BQ5TFG8 222 aa3.89□□□□□ -1.79
ABCF1-207ENST00000542772 CD164L2Q6UWJ8 174 aa3.89□□□□□ -1.79
ABCF1-207ENST00000542772 Q6ZN92 141 aa3.89□□□□□ -1.79
ABCF1-207ENST00000542772 LINC01561Q8N1V8 128 aa3.89□□□□□ -1.79
ABCF1-207ENST00000542772 HIST3H2BBQ8N257 126 aa3.89□□□□□ -1.79
ABCF1-207ENST00000542772 CHCHD10Q8WYQ3 142 aaPredicted RBP3.89□□□□□ -1.79
ABCF1-207ENST00000542772 C1orf43Q9BWL3 253 aa3.89□□□□□ -1.79
ABCF1-207ENST00000542772 HSPB8Q9UJY1 196 aa3.89□□□□□ -1.79
ABCF1-207ENST00000542772 FRAS1Q86XX4 4008 aa3.89□□□□□ -1.79
ABCF1-207ENST00000542772 IGKV2D-24A0A075B6R9 120 aa3.88□□□□□ -1.79
ABCF1-207ENST00000542772 TINCRA0A1B0GVN0 87 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 148.6 ms