RNA–Protein interactions for RNA: ENST00000541167.5

RAP1B-223, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-223	ENST00000541167	RHEB	Q15382	184 aa		13.19	□□□□□ -0.3
RAP1B-223	ENST00000541167	C14orf177	Q52M58	125 aa		13.19	□□□□□ -0.3
RAP1B-223	ENST00000541167	USP17L23	D6RBM5	183 aa		13.18	□□□□□ -0.3
RAP1B-223	ENST00000541167	TCAP	O15273	167 aa		13.18	□□□□□ -0.3
RAP1B-223	ENST00000541167	MRPL52	Q86TS9	123 aa	Known RBP	13.18	□□□□□ -0.3
RAP1B-223	ENST00000541167	RPS10P5	Q9NQ39	176 aa		13.18	□□□□□ -0.3
RAP1B-223	ENST00000541167	DGAT2L7P	Q6IED9	249 aa		13.17	□□□□□ -0.3
RAP1B-223	ENST00000541167	LAMTOR2	Q9Y2Q5	125 aa		13.17	□□□□□ -0.3
RAP1B-223	ENST00000541167	SMAGP	Q0VAQ4	97 aa		13.16	□□□□□ -0.3
RAP1B-223	ENST00000541167	TMEM18	Q96B42	140 aa		13.16	□□□□□ -0.3
RAP1B-223	ENST00000541167	APOC3	P02656	99 aa		13.15	□□□□□ -0.3
RAP1B-223	ENST00000541167	NDUFA5	Q16718	116 aa		13.15	□□□□□ -0.3
RAP1B-223	ENST00000541167	MAP1LC3A	Q9H492	121 aa		13.15	□□□□□ -0.3
RAP1B-223	ENST00000541167	GAGE12H	A6NDE8	117 aa		13.14	□□□□□ -0.31
RAP1B-223	ENST00000541167	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	13.14	□□□□□ -0.31
RAP1B-223	ENST00000541167	CDC42SE2	Q9NRR3	84 aa		13.14	□□□□□ -0.31
RAP1B-223	ENST00000541167	UBE2D4	Q9Y2X8	147 aa		13.14	□□□□□ -0.31
RAP1B-223	ENST00000541167	APOB	P04114	4563 aa	Known RBP	13.13	□□□□□ -0.31
RAP1B-223	ENST00000541167	LOC389332	A0A1B0GUA5	103 aa		13.13	□□□□□ -0.31
RAP1B-223	ENST00000541167	RAB5A	P20339	215 aa		13.13	□□□□□ -0.31
RAP1B-223	ENST00000541167	ZNF664	Q8N3J9	261 aa		13.13	□□□□□ -0.31
RAP1B-223	ENST00000541167	CSDC2	Q9Y534	153 aa	Known RBP	13.12	□□□□□ -0.31
RAP1B-223	ENST00000541167	PRSS47	A8MTI9	375 aa		13.11	□□□□□ -0.31
RAP1B-223	ENST00000541167	SNAPIN	O95295	136 aa		13.11	□□□□□ -0.31
RAP1B-223	ENST00000541167	RPL39	P62891	51 aa	Known RBP	13.11	□□□□□ -0.31
RAP1B-223	ENST00000541167	SVBP	Q8N300	66 aa		13.11	□□□□□ -0.31
RAP1B-223	ENST00000541167	TIMM21	Q9BVV7	248 aa		13.11	□□□□□ -0.31
RAP1B-223	ENST00000541167	LINC00959	A0A1B0GUT2	108 aa		13.1	□□□□□ -0.31
RAP1B-223	ENST00000541167	PRSS1	P07477	247 aa		13.1	□□□□□ -0.31
RAP1B-223	ENST00000541167	KIAA1644	Q3SXP7	199 aa		13.1	□□□□□ -0.31
RAP1B-223	ENST00000541167	LINC01620	Q4KN68	170 aa		13.1	□□□□□ -0.31
RAP1B-223	ENST00000541167	XCL1	P47992	114 aa		13.09	□□□□□ -0.31
RAP1B-223	ENST00000541167	SS18	Q15532	418 aa		13.09	□□□□□ -0.31
RAP1B-223	ENST00000541167	COX19	Q49B96	90 aa		13.09	□□□□□ -0.31
RAP1B-223	ENST00000541167	RNASE13	Q5GAN3	156 aa	Known RBP	13.09	□□□□□ -0.31
RAP1B-223	ENST00000541167		Q6ZUT4	128 aa		13.09	□□□□□ -0.31
RAP1B-223	ENST00000541167		Q8N8P6	123 aa		13.09	□□□□□ -0.31
RAP1B-223	ENST00000541167	GNB1L	Q9BYB4	327 aa		13.09	□□□□□ -0.31
RAP1B-223	ENST00000541167	HSPG2	P98160	4391 aa		13.09	□□□□□ -0.31
RAP1B-223	ENST00000541167	CCL25	O15444	150 aa		13.08	□□□□□ -0.32
RAP1B-223	ENST00000541167	hDV102S1	A0JD36	115 aa		13.07	□□□□□ -0.32
RAP1B-223	ENST00000541167	SPANXA1	Q9NS26	97 aa		13.07	□□□□□ -0.32
RAP1B-223	ENST00000541167	XG	P55808	180 aa		13.06	□□□□□ -0.32
RAP1B-223	ENST00000541167	FOXI1	Q12951	378 aa		13.06	□□□□□ -0.32
RAP1B-223	ENST00000541167	CFAP161	Q6P656	301 aa		13.06	□□□□□ -0.32
RAP1B-223	ENST00000541167	MT-ND6	P03923	174 aa		13.05	□□□□□ -0.32
RAP1B-223	ENST00000541167	NXT2	Q9NPJ8	142 aa	Known RBP	13.05	□□□□□ -0.32
RAP1B-223	ENST00000541167	AP5S1	Q9NUS5	200 aa		13.05	□□□□□ -0.32
RAP1B-223	ENST00000541167	TGIF2-C20orf24	A0A0A6YYL0	155 aa		13.04	□□□□□ -0.32
RAP1B-223	ENST00000541167	TRAV13-1	A0A0B4J241	112 aa		13.04	□□□□□ -0.32
RAP1B-223	ENST00000541167	IFI27	P40305	119 aa	Predicted RBP	13.04	□□□□□ -0.32
RAP1B-223	ENST00000541167	HAMP	P81172	84 aa		13.04	□□□□□ -0.32
RAP1B-223	ENST00000541167	C15orf56	Q8N910	161 aa		13.04	□□□□□ -0.32
RAP1B-223	ENST00000541167	MRPL18	Q9H0U6	180 aa	Known RBP	13.04	□□□□□ -0.32
RAP1B-223	ENST00000541167	FAM30A	Q9NZY2	134 aa		13.04	□□□□□ -0.32
RAP1B-223	ENST00000541167	C1orf196	B1AJZ1	125 aa		13.03	□□□□□ -0.32
RAP1B-223	ENST00000541167	ORMDL2	Q53FV1	153 aa		13.03	□□□□□ -0.32
RAP1B-223	ENST00000541167	CD164L2	Q6UWJ8	174 aa		13.03	□□□□□ -0.32
RAP1B-223	ENST00000541167	OPRPN	Q99935	248 aa	Predicted RBP	13.03	□□□□□ -0.32
RAP1B-223	ENST00000541167		K7EMI3	77 aa		13.02	□□□□□ -0.33
RAP1B-223	ENST00000541167	MRPS36	P82909	103 aa	Known RBP	13.02	□□□□□ -0.33
RAP1B-223	ENST00000541167	FABP9	Q0Z7S8	132 aa		13.02	□□□□□ -0.33
RAP1B-223	ENST00000541167	HIGD2B	Q4VC39	106 aa		13.02	□□□□□ -0.33
RAP1B-223	ENST00000541167	C2orf66	Q6UXQ4	117 aa		13.01	□□□□□ -0.33
RAP1B-223	ENST00000541167	FAM104A	Q969W3	186 aa		13.01	□□□□□ -0.33
RAP1B-223	ENST00000541167	CYSLTR1	Q9Y271	337 aa		13.01	□□□□□ -0.33
RAP1B-223	ENST00000541167	CNBP	P62633	177 aa	Known RBP	13	□□□□□ -0.33
RAP1B-223	ENST00000541167		Q6ZSA8	131 aa		13	□□□□□ -0.33
RAP1B-223	ENST00000541167	SLC7A5P1	Q8MH63	180 aa		13	□□□□□ -0.33
RAP1B-223	ENST00000541167		Q8N1X5	172 aa		13	□□□□□ -0.33
RAP1B-223	ENST00000541167	ALKBH7	Q9BT30	221 aa	Predicted RBP	13	□□□□□ -0.33
RAP1B-223	ENST00000541167	PYGO1	Q9Y3Y4	419 aa		13	□□□□□ -0.33
RAP1B-223	ENST00000541167	ABCA13	Q86UQ4	5058 aa		13	□□□□□ -0.33
RAP1B-223	ENST00000541167	GVQW2	A0A096LPI5	108 aa	Predicted RBP	12.99	□□□□□ -0.33
RAP1B-223	ENST00000541167	IFITM10	A6NMD0	228 aa		12.99	□□□□□ -0.33
RAP1B-223	ENST00000541167	C9orf163	Q8N9P6	203 aa		12.99	□□□□□ -0.33
RAP1B-223	ENST00000541167	PRSS3P2	Q8NHM4	247 aa		12.99	□□□□□ -0.33
RAP1B-223	ENST00000541167	DNAH8	Q96JB1	4490 aa		12.99	□□□□□ -0.33
RAP1B-223	ENST00000541167	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	12.98	□□□□□ -0.33
RAP1B-223	ENST00000541167	IGHV1-58	A0A0C4DH39	117 aa		12.98	□□□□□ -0.33
RAP1B-223	ENST00000541167	TRAPPC1	Q9Y5R8	145 aa		12.98	□□□□□ -0.33
RAP1B-223	ENST00000541167	IGLV4-3	A0A075B6K6	122 aa		12.97	□□□□□ -0.33
RAP1B-223	ENST00000541167	COX7A2L	O14548	114 aa		12.97	□□□□□ -0.33
RAP1B-223	ENST00000541167	MAL	P21145	153 aa		12.97	□□□□□ -0.33
RAP1B-223	ENST00000541167	TMEM141	Q96I45	108 aa		12.97	□□□□□ -0.33
RAP1B-223	ENST00000541167	SLPI	P03973	132 aa		12.96	□□□□□ -0.33
RAP1B-223	ENST00000541167	G0S2	P27469	103 aa		12.95	□□□□□ -0.34
RAP1B-223	ENST00000541167	KRTAP4-5	Q9BYR2	181 aa		12.95	□□□□□ -0.34
RAP1B-223	ENST00000541167	SMR3B	P02814	79 aa	Predicted RBP	12.94	□□□□□ -0.34
RAP1B-223	ENST00000541167		Q6ZN92	141 aa		12.94	□□□□□ -0.34
RAP1B-223	ENST00000541167	TEX43	Q6ZNM6	134 aa		12.94	□□□□□ -0.34
RAP1B-223	ENST00000541167	C5orf38	Q86SI9	138 aa		12.94	□□□□□ -0.34
RAP1B-223	ENST00000541167	IGHV3-64	A0A075B6Q5	118 aa		12.93	□□□□□ -0.34
RAP1B-223	ENST00000541167	FA2H	Q7L5A8	372 aa		12.93	□□□□□ -0.34
RAP1B-223	ENST00000541167	SCX	Q7RTU7	201 aa		12.93	□□□□□ -0.34
RAP1B-223	ENST00000541167	C2orf88	Q9BSF0	95 aa		12.93	□□□□□ -0.34
RAP1B-223	ENST00000541167	SMCO4	Q9NRQ5	59 aa		12.93	□□□□□ -0.34
RAP1B-223	ENST00000541167	ZNF561-AS1	K7EIQ3	104 aa		12.92	□□□□□ -0.34
RAP1B-223	ENST00000541167	LINC00526	Q96FQ7	95 aa		12.92	□□□□□ -0.34
RAP1B-223	ENST00000541167	YPEL4	Q96NS1	127 aa		12.92	□□□□□ -0.34

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