RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 TRAPPC1Q9Y5R8 145 aa12.93□□□□□ -0.34
DDX55-207ENST00000540763 A0A087WTM6 91 aa12.92□□□□□ -0.34
DDX55-207ENST00000540763 LOC389332A0A1B0GUA5 103 aa12.92□□□□□ -0.34
DDX55-207ENST00000540763 LRCOL1A6NCL2 159 aa12.92□□□□□ -0.34
DDX55-207ENST00000540763 CLPSL2Q6UWE3 100 aa12.91□□□□□ -0.34
DDX55-207ENST00000540763 ORMDL2Q53FV1 153 aa12.9□□□□□ -0.34
DDX55-207ENST00000540763 DGAT2L7PQ6IED9 249 aa12.9□□□□□ -0.34
DDX55-207ENST00000540763 CDC42SE2Q9NRR3 84 aa12.9□□□□□ -0.34
DDX55-207ENST00000540763 SPANXA1Q9NS26 97 aa12.9□□□□□ -0.34
DDX55-207ENST00000540763 G0S2P27469 103 aa12.88□□□□□ -0.35
DDX55-207ENST00000540763 IFI27P40305 119 aaPredicted RBP12.88□□□□□ -0.35
DDX55-207ENST00000540763 ZNF664Q8N3J9 261 aa12.88□□□□□ -0.35
DDX55-207ENST00000540763 MAPKAPK5-AS1Q8N8E1 139 aa12.88□□□□□ -0.35
DDX55-207ENST00000540763 LINC01546A6NGU7 62 aa12.87□□□□□ -0.35
DDX55-207ENST00000540763 RPL39P62891 51 aaKnown RBP12.87□□□□□ -0.35
DDX55-207ENST00000540763 KRTAP26-1Q6PEX3 210 aa12.87□□□□□ -0.35
DDX55-207ENST00000540763 MRPS36P82909 103 aaKnown RBP12.86□□□□□ -0.35
DDX55-207ENST00000540763 CDPF1Q6NVV7 123 aa12.86□□□□□ -0.35
DDX55-207ENST00000540763 PRSS3P2Q8NHM4 247 aa12.86□□□□□ -0.35
DDX55-207ENST00000540763 CYSLTR1Q9Y271 337 aa12.86□□□□□ -0.35
DDX55-207ENST00000540763 PYGO1Q9Y3Y4 419 aa12.86□□□□□ -0.35
DDX55-207ENST00000540763 PKD1P98161 4303 aa12.86□□□□□ -0.35
DDX55-207ENST00000540763 SPATA12Q7Z6I5 190 aa12.85□□□□□ -0.35
DDX55-207ENST00000540763 LINC01549A6NIU2 74 aa12.84□□□□□ -0.35
DDX55-207ENST00000540763 CCL25O15444 150 aa12.84□□□□□ -0.35
DDX55-207ENST00000540763 NPSP0C0P6 89 aa12.84□□□□□ -0.35
DDX55-207ENST00000540763 C2orf66Q6UXQ4 117 aa12.84□□□□□ -0.35
DDX55-207ENST00000540763 Q8N814 137 aa12.84□□□□□ -0.35
DDX55-207ENST00000540763 PGPEP1Q9NXJ5 209 aa12.84□□□□□ -0.35
DDX55-207ENST00000540763 PCLOQ9Y6V0 5065 aa12.83□□□□□ -0.36
DDX55-207ENST00000540763 IGLV10-54A0A075B6I4 117 aa12.83□□□□□ -0.36
DDX55-207ENST00000540763 Q6ZUT4 128 aa12.83□□□□□ -0.36
DDX55-207ENST00000540763 C18orf32Q8TCD1 76 aa12.83□□□□□ -0.36
DDX55-207ENST00000540763 NTN5Q8WTR8 489 aaPredicted RBP12.83□□□□□ -0.36
DDX55-207ENST00000540763 BAALCQ8WXS3 180 aa12.83□□□□□ -0.36
DDX55-207ENST00000540763 KIAA1109Q2LD37 5005 aa12.83□□□□□ -0.36
DDX55-207ENST00000540763 IGKV3OR2-268A0A0C4DH90 116 aa12.82□□□□□ -0.36
DDX55-207ENST00000540763 LINC00959A0A1B0GUT2 108 aa12.82□□□□□ -0.36
DDX55-207ENST00000540763 C14orf177Q52M58 125 aa12.82□□□□□ -0.36
DDX55-207ENST00000540763 KRTAP10-2P60368 255 aa12.81□□□□□ -0.36
DDX55-207ENST00000540763 WFDC2Q14508 124 aa12.81□□□□□ -0.36
DDX55-207ENST00000540763 SS18Q15532 418 aa12.81□□□□□ -0.36
DDX55-207ENST00000540763 FA2HQ7L5A8 372 aa12.81□□□□□ -0.36
DDX55-207ENST00000540763 CHCHD10Q8WYQ3 142 aaPredicted RBP12.81□□□□□ -0.36
DDX55-207ENST00000540763 COLCA2A8K830 154 aa12.8□□□□□ -0.36
DDX55-207ENST00000540763 FAM104AQ969W3 186 aa12.8□□□□□ -0.36
DDX55-207ENST00000540763 DNAH11Q96DT5 4516 aa12.8□□□□□ -0.36
DDX55-207ENST00000540763 PKHD1P08F94 4074 aa12.79□□□□□ -0.36
DDX55-207ENST00000540763 C1orf196B1AJZ1 125 aa12.79□□□□□ -0.36
DDX55-207ENST00000540763 TOMM6Q96B49 74 aa12.79□□□□□ -0.36
DDX55-207ENST00000540763 TMEM141Q96I45 108 aa12.79□□□□□ -0.36
DDX55-207ENST00000540763 AP5S1Q9NUS5 200 aa12.79□□□□□ -0.36
DDX55-207ENST00000540763 IGLV4-3A0A075B6K6 122 aa12.78□□□□□ -0.36
DDX55-207ENST00000540763 GAGE12HA6NDE8 117 aa12.78□□□□□ -0.36
DDX55-207ENST00000540763 USP17L23D6RBM5 183 aa12.78□□□□□ -0.36
DDX55-207ENST00000540763 LECT2O14960 151 aa12.78□□□□□ -0.36
DDX55-207ENST00000540763 RAB5BP61020 215 aa12.78□□□□□ -0.36
DDX55-207ENST00000540763 TIMM17AQ99595 171 aa12.78□□□□□ -0.36
DDX55-207ENST00000540763 IGIPA6NJ69 53 aa12.77□□□□□ -0.37
DDX55-207ENST00000540763 C16orf90A8MZG2 172 aa12.77□□□□□ -0.37
DDX55-207ENST00000540763 RNASE13Q5GAN3 156 aaKnown RBP12.77□□□□□ -0.37
DDX55-207ENST00000540763 CD164L2Q6UWJ8 174 aa12.77□□□□□ -0.37
DDX55-207ENST00000540763 LINC00614P0C842 121 aa12.76□□□□□ -0.37
DDX55-207ENST00000540763 S100A1P23297 94 aa12.76□□□□□ -0.37
DDX55-207ENST00000540763 FOXI1Q12951 378 aa12.76□□□□□ -0.37
DDX55-207ENST00000540763 PAPPA-AS1Q5QFB9 102 aa12.76□□□□□ -0.37
DDX55-207ENST00000540763 Q6ZN92 141 aa12.76□□□□□ -0.37
DDX55-207ENST00000540763 TRGC2P03986 189 aa12.75□□□□□ -0.37
DDX55-207ENST00000540763 XCL1P47992 114 aa12.75□□□□□ -0.37
DDX55-207ENST00000540763 ERASQ7Z444 233 aa12.75□□□□□ -0.37
DDX55-207ENST00000540763 URB1-AS1Q96HZ7 61 aa12.75□□□□□ -0.37
DDX55-207ENST00000540763 OPRPNQ99935 248 aaPredicted RBP12.75□□□□□ -0.37
DDX55-207ENST00000540763 IGLV5-52A0A0A0MRZ9 124 aa12.74□□□□□ -0.37
DDX55-207ENST00000540763 TRAV13-1A0A0B4J241 112 aa12.74□□□□□ -0.37
DDX55-207ENST00000540763 IFITM10A6NMD0 228 aa12.74□□□□□ -0.37
DDX55-207ENST00000540763 SCO1O75880 301 aa12.74□□□□□ -0.37
DDX55-207ENST00000540763 CFAP161Q6P656 301 aa12.74□□□□□ -0.37
DDX55-207ENST00000540763 TEX43Q6ZNM6 134 aa12.74□□□□□ -0.37
DDX55-207ENST00000540763 AMELXQ99217 191 aa12.74□□□□□ -0.37
DDX55-207ENST00000540763 CHCHD1Q96BP2 118 aaKnown RBP12.72□□□□□ -0.37
DDX55-207ENST00000540763 C2orf88Q9BSF0 95 aa12.72□□□□□ -0.37
DDX55-207ENST00000540763 LINC00173Q6ZV60 143 aa12.71□□□□□ -0.37
DDX55-207ENST00000540763 SCGB3A1Q96QR1 104 aa12.71□□□□□ -0.37
DDX55-207ENST00000540763 VCX2Q9H322 139 aa12.71□□□□□ -0.37
DDX55-207ENST00000540763 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.7□□□□□ -0.38
DDX55-207ENST00000540763 ATP6V1G1O75348 118 aa12.7□□□□□ -0.38
DDX55-207ENST00000540763 HBDP02042 147 aa12.7□□□□□ -0.38
DDX55-207ENST00000540763 PRSS1P07477 247 aa12.7□□□□□ -0.38
DDX55-207ENST00000540763 C15orf56Q8N910 161 aa12.7□□□□□ -0.38
DDX55-207ENST00000540763 A0A096LNJ9 63 aa12.69□□□□□ -0.38
DDX55-207ENST00000540763 IGHV1-58A0A0C4DH39 117 aa12.69□□□□□ -0.38
DDX55-207ENST00000540763 FAM19A3Q7Z5A8 133 aa12.69□□□□□ -0.38
DDX55-207ENST00000540763 DYNC1H1Q14204 4646 aaKnown RBP12.69□□□□□ -0.38
DDX55-207ENST00000540763 GVQW2A0A096LPI5 108 aaPredicted RBP12.68□□□□□ -0.38
DDX55-207ENST00000540763 COX7A2LO14548 114 aa12.68□□□□□ -0.38
DDX55-207ENST00000540763 GCSHP23434 173 aa12.68□□□□□ -0.38
DDX55-207ENST00000540763 UBE2D1P51668 147 aa12.68□□□□□ -0.38
DDX55-207ENST00000540763 DNAH5Q8TE73 4624 aa12.68□□□□□ -0.38
DDX55-207ENST00000540763 IGHV3OR16-9A0A0B4J2B5 98 aa12.67□□□□□ -0.38
DDX55-207ENST00000540763 hDV102S1A0JD36 115 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms