RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 DIRC1Q969H9 104 aa4.36□□□□□ -1.71
SNHG1-211ENST00000539921 LIMD2Q9BT23 127 aa4.36□□□□□ -1.71
SNHG1-211ENST00000539921 OCR1Q9BZK8 76 aa4.36□□□□□ -1.71
SNHG1-211ENST00000539921 CHD7Q9P2D1 2997 aa4.36□□□□□ -1.71
SNHG1-211ENST00000539921 MALRD1Q5VYJ5 2156 aa4.36□□□□□ -1.71
SNHG1-211ENST00000539921 IGHV4-38-2P0DP08 117 aa4.35□□□□□ -1.71
SNHG1-211ENST00000539921 ELOF1P60002 83 aaKnown RBP4.35□□□□□ -1.71
SNHG1-211ENST00000539921 ASB16-AS1Q495Z4 193 aa4.35□□□□□ -1.71
SNHG1-211ENST00000539921 DEFB123Q8N688 67 aa4.35□□□□□ -1.71
SNHG1-211ENST00000539921 SND1-IT1Q9HBX3 110 aa4.35□□□□□ -1.71
SNHG1-211ENST00000539921 CDKN2A-AS1Q9UH64 79 aa4.35□□□□□ -1.71
SNHG1-211ENST00000539921 PRUNE2Q8WUY3 3088 aa4.35□□□□□ -1.71
SNHG1-211ENST00000539921 COL6A3P12111 3177 aa4.35□□□□□ -1.71
SNHG1-211ENST00000539921 DOCK10Q96BY6 2186 aa4.34□□□□□ -1.71
SNHG1-211ENST00000539921 EYSQ5T1H1 3165 aa4.34□□□□□ -1.71
SNHG1-211ENST00000539921 IGKV2-28A0A075B6P5 120 aa4.34□□□□□ -1.71
SNHG1-211ENST00000539921 TRAV10A0A0B4J240 114 aa4.34□□□□□ -1.71
SNHG1-211ENST00000539921 TRAV22A0A0B4J277 110 aa4.34□□□□□ -1.71
SNHG1-211ENST00000539921 IGHV3-16A0A0C4DH30 117 aa4.34□□□□□ -1.71
SNHG1-211ENST00000539921 A0A1B0GW54 56 aa4.34□□□□□ -1.71
SNHG1-211ENST00000539921 BPY2O14599 106 aa4.34□□□□□ -1.71
SNHG1-211ENST00000539921 NDUFB1O75438 58 aa4.34□□□□□ -1.71
SNHG1-211ENST00000539921 IGKV2D-28P01615 120 aa4.34□□□□□ -1.71
SNHG1-211ENST00000539921 IGHV4-31P0DP07 118 aa4.34□□□□□ -1.71
SNHG1-211ENST00000539921 SYCNQ0VAF6 134 aa4.34□□□□□ -1.71
SNHG1-211ENST00000539921 MUC7Q8TAX7 377 aa4.34□□□□□ -1.71
SNHG1-211ENST00000539921 CCL17Q92583 94 aa4.34□□□□□ -1.71
SNHG1-211ENST00000539921 SVILO95425 2214 aa4.34□□□□□ -1.72
SNHG1-211ENST00000539921 CNTRLQ7Z7A1 2325 aa4.34□□□□□ -1.72
SNHG1-211ENST00000539921 TRBV6-8A0A0A6YYG3 113 aa4.33□□□□□ -1.72
SNHG1-211ENST00000539921 TRBV6-4A0A1B0GX49 114 aa4.33□□□□□ -1.72
SNHG1-211ENST00000539921 EPOPA6NHQ4 379 aa4.33□□□□□ -1.72
SNHG1-211ENST00000539921 A6NN06 94 aa4.33□□□□□ -1.72
SNHG1-211ENST00000539921 C8orf87E5RJ46 101 aa4.33□□□□□ -1.72
SNHG1-211ENST00000539921 SPRY3O43610 288 aa4.33□□□□□ -1.72
SNHG1-211ENST00000539921 RPL36AP83881 106 aaKnown RBP4.33□□□□□ -1.72
SNHG1-211ENST00000539921 Q8N814 137 aa4.33□□□□□ -1.72
SNHG1-211ENST00000539921 C11orf72Q8NBR9 251 aa4.33□□□□□ -1.72
SNHG1-211ENST00000539921 RPL36ALQ969Q0 106 aaKnown RBP4.33□□□□□ -1.72
SNHG1-211ENST00000539921 CHCHD7Q9BUK0 85 aa4.33□□□□□ -1.72
SNHG1-211ENST00000539921 UNC80Q8N2C7 3258 aa4.33□□□□□ -1.72
SNHG1-211ENST00000539921 KHDC1LQ5JSQ8 128 aa4.32□□□□□ -1.72
SNHG1-211ENST00000539921 LINC00242Q5T6M2 205 aa4.32□□□□□ -1.72
SNHG1-211ENST00000539921 Q6ZS52 159 aa4.32□□□□□ -1.72
SNHG1-211ENST00000539921 NTM-AS1Q6ZSK4 140 aa4.32□□□□□ -1.72
SNHG1-211ENST00000539921 LINC00269Q8N2A0 174 aa4.32□□□□□ -1.72
SNHG1-211ENST00000539921 IGHV7-81A0A0B4J1V7 117 aa4.31□□□□□ -1.72
SNHG1-211ENST00000539921 IGHV3-72A0A0B4J1Y9 119 aa4.31□□□□□ -1.72
SNHG1-211ENST00000539921 IGHV3-38A0A0C4DH36 116 aa4.31□□□□□ -1.72
SNHG1-211ENST00000539921 GNRH2O43555 120 aa4.31□□□□□ -1.72
SNHG1-211ENST00000539921 APELAP0DMC3 54 aa4.31□□□□□ -1.72
SNHG1-211ENST00000539921 NDPQ00604 133 aa4.31□□□□□ -1.72
SNHG1-211ENST00000539921 CLEC19AQ6UXS0 136 aa4.31□□□□□ -1.72
SNHG1-211ENST00000539921 Q75L30 129 aa4.31□□□□□ -1.72
SNHG1-211ENST00000539921 WFDC9Q8NEX5 89 aa4.31□□□□□ -1.72
SNHG1-211ENST00000539921 ZCCHC13Q8WW36 166 aaKnown RBP4.31□□□□□ -1.72
SNHG1-211ENST00000539921 DPM3Q9P2X0 92 aa4.31□□□□□ -1.72
SNHG1-211ENST00000539921 F5P12259 2224 aa4.31□□□□□ -1.72
SNHG1-211ENST00000539921 XIRP2A4UGR9 3374 aa4.31□□□□□ -1.72
SNHG1-211ENST00000539921 SPTBN5Q9NRC6 3674 aaKnown RBP4.31□□□□□ -1.72
SNHG1-211ENST00000539921 A0A087WWL8 130 aa4.3□□□□□ -1.72
SNHG1-211ENST00000539921 LY6G6EA0A0G2JKS1 128 aa4.3□□□□□ -1.72
SNHG1-211ENST00000539921 TRBV10-1A0A0K0K1A3 114 aa4.3□□□□□ -1.72
SNHG1-211ENST00000539921 LOC101927531A0A1B0GV80 90 aa4.3□□□□□ -1.72
SNHG1-211ENST00000539921 ODF3BA8MYP8 253 aa4.3□□□□□ -1.72
SNHG1-211ENST00000539921 K7EQD1 137 aa4.3□□□□□ -1.72
SNHG1-211ENST00000539921 K7EQG2 157 aa4.3□□□□□ -1.72
SNHG1-211ENST00000539921 NDUFA4O00483 81 aa4.3□□□□□ -1.72
SNHG1-211ENST00000539921 PSCAO43653 123 aa4.3□□□□□ -1.72
SNHG1-211ENST00000539921 RNASE1P07998 156 aaKnown RBP4.3□□□□□ -1.72
SNHG1-211ENST00000539921 MINOS1Q5TGZ0 78 aa4.3□□□□□ -1.72
SNHG1-211ENST00000539921 SPINK14Q6IE38 97 aa4.3□□□□□ -1.72
SNHG1-211ENST00000539921 DEFB108BQ8NET1 73 aa4.3□□□□□ -1.72
SNHG1-211ENST00000539921 C11orf45Q8TAV5 145 aa4.3□□□□□ -1.72
SNHG1-211ENST00000539921 Q9BRP9 147 aa4.3□□□□□ -1.72
SNHG1-211ENST00000539921 C19orf73Q9NVV2 129 aa4.3□□□□□ -1.72
SNHG1-211ENST00000539921 U3KQA8 63 aa4.3□□□□□ -1.72
SNHG1-211ENST00000539921 ZGRF1Q86YA3 2104 aa4.3□□□□□ -1.72
SNHG1-211ENST00000539921 MUC3AQ02505 3323 aa4.29□□□□□ -1.72
SNHG1-211ENST00000539921 POLEQ07864 2286 aa4.29□□□□□ -1.72
SNHG1-211ENST00000539921 REV3LO60673 3130 aa4.29□□□□□ -1.72
SNHG1-211ENST00000539921 CUL9Q8IWT3 2517 aa4.29□□□□□ -1.72
SNHG1-211ENST00000539921 VCANP13611 3396 aa4.29□□□□□ -1.72
SNHG1-211ENST00000539921 IGHV3OR16-12A0A075B7B8 117 aa4.29□□□□□ -1.72
SNHG1-211ENST00000539921 GNLYP22749 145 aa4.29□□□□□ -1.72
SNHG1-211ENST00000539921 CCL18P55774 89 aa4.29□□□□□ -1.72
SNHG1-211ENST00000539921 HAMPP81172 84 aa4.29□□□□□ -1.72
SNHG1-211ENST00000539921 KIAA0087Q14695 138 aa4.29□□□□□ -1.72
SNHG1-211ENST00000539921 Q5VV11 94 aa4.29□□□□□ -1.72
SNHG1-211ENST00000539921 NKAPP1Q8N9T2 125 aa4.29□□□□□ -1.72
SNHG1-211ENST00000539921 SPANXA2-OT1Q8N9U9 137 aa4.29□□□□□ -1.72
SNHG1-211ENST00000539921 C1orf64Q8NEQ6 169 aa4.29□□□□□ -1.72
SNHG1-211ENST00000539921 PRSS33Q8NF86 280 aa4.29□□□□□ -1.72
SNHG1-211ENST00000539921 BBC3Q96PG8 261 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-211ENST00000539921 MINOS1-NBL1R4GNA1 71 aa4.29□□□□□ -1.72
SNHG1-211ENST00000539921 ASCC3Q8N3C0 2202 aaKnown RBP4.29□□□□□ -1.72
SNHG1-211ENST00000539921 IGHV1OR15-1A0A075B7D0 117 aa4.28□□□□□ -1.72
SNHG1-211ENST00000539921 IGHV3-35A0A0C4DH35 117 aa4.28□□□□□ -1.72
SNHG1-211ENST00000539921 H3BUA1 57 aa4.28□□□□□ -1.72
SNHG1-211ENST00000539921 FAM74A4Q5TZK3 123 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 161.9 ms