RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 WFDC9Q8NEX5 89 aa12.34□□□□□ -0.43
PCDHB17P-201ENST00000539533 LINC00467Q9BRT7 94 aa12.34□□□□□ -0.43
PCDHB17P-201ENST00000539533 F5H697 171 aa12.34□□□□□ -0.43
PCDHB17P-201ENST00000539533 C11orf72Q8NBR9 251 aa12.34□□□□□ -0.43
PCDHB17P-201ENST00000539533 SDHAF1A6NFY7 115 aa12.33□□□□□ -0.44
PCDHB17P-201ENST00000539533 TMEM170BQ5T4T1 132 aa12.33□□□□□ -0.44
PCDHB17P-201ENST00000539533 ZFAND6Q6FIF0 208 aa12.33□□□□□ -0.44
PCDHB17P-201ENST00000539533 IGHV3-30P01768 117 aa12.33□□□□□ -0.44
PCDHB17P-201ENST00000539533 IGHV3-30-5P0DP03 117 aa12.33□□□□□ -0.44
PCDHB17P-201ENST00000539533 ZNF415Q09FC8 603 aa12.33□□□□□ -0.44
PCDHB17P-201ENST00000539533 ANKRD29Q8N6D5 301 aa12.33□□□□□ -0.44
PCDHB17P-201ENST00000539533 ZNRF2Q8NHG8 242 aa12.33□□□□□ -0.44
PCDHB17P-201ENST00000539533 SLC25A29Q8N8R3 303 aa12.32□□□□□ -0.44
PCDHB17P-201ENST00000539533 TRBV27A0A0K0K1C4 114 aa12.32□□□□□ -0.44
PCDHB17P-201ENST00000539533 SBSPONQ8IVN8 264 aa12.32□□□□□ -0.44
PCDHB17P-201ENST00000539533 C3orf56Q8N813 242 aa12.32□□□□□ -0.44
PCDHB17P-201ENST00000539533 TRBV20-1A0A075B6N2 111 aa12.31□□□□□ -0.44
PCDHB17P-201ENST00000539533 CFC1BP0CG36 223 aa12.31□□□□□ -0.44
PCDHB17P-201ENST00000539533 CFC1P0CG37 223 aa12.31□□□□□ -0.44
PCDHB17P-201ENST00000539533 M0R2P5 195 aa12.3□□□□□ -0.44
PCDHB17P-201ENST00000539533 AMELXQ99217 191 aa12.3□□□□□ -0.44
PCDHB17P-201ENST00000539533 TRBV6-5A0A0K0K1A5 114 aa12.3□□□□□ -0.44
PCDHB17P-201ENST00000539533 SCGB1C2P0DMR2 95 aa12.3□□□□□ -0.44
PCDHB17P-201ENST00000539533 GAGE5Q13069 117 aa12.3□□□□□ -0.44
PCDHB17P-201ENST00000539533 GAGE6Q13070 117 aa12.3□□□□□ -0.44
PCDHB17P-201ENST00000539533 CSNK1G2-AS1Q8NCQ2 148 aa12.3□□□□□ -0.44
PCDHB17P-201ENST00000539533 J3QQQ9 107 aa12.29□□□□□ -0.44
PCDHB17P-201ENST00000539533 TMEM262E9PQX1 116 aa12.29□□□□□ -0.44
PCDHB17P-201ENST00000539533 C10orf126Q8N4M7 172 aa12.29□□□□□ -0.44
PCDHB17P-201ENST00000539533 B5MCH6 92 aa12.28□□□□□ -0.44
PCDHB17P-201ENST00000539533 LGALS3P17931 250 aaKnown RBP12.28□□□□□ -0.44
PCDHB17P-201ENST00000539533 ZNF56Q15929 161 aa12.28□□□□□ -0.44
PCDHB17P-201ENST00000539533 IGHV3-73A0A0B4J1V6 119 aa12.27□□□□□ -0.44
PCDHB17P-201ENST00000539533 SPXQ9BT56 116 aa12.27□□□□□ -0.44
PCDHB17P-201ENST00000539533 PRO1854Q9UHT4 67 aa12.27□□□□□ -0.45
PCDHB17P-201ENST00000539533 COL6A5A8TX70 2615 aa12.26□□□□□ -0.45
PCDHB17P-201ENST00000539533 PKD1L1Q8TDX9 2849 aa12.26□□□□□ -0.45
PCDHB17P-201ENST00000539533 M0QY20 66 aa12.26□□□□□ -0.45
PCDHB17P-201ENST00000539533 OPRPNQ99935 248 aaPredicted RBP12.26□□□□□ -0.45
PCDHB17P-201ENST00000539533 SLC25A20O43772 301 aa12.25□□□□□ -0.45
PCDHB17P-201ENST00000539533 RHOHQ15669 191 aa12.25□□□□□ -0.45
PCDHB17P-201ENST00000539533 SHISA2Q6UWI4 295 aa12.25□□□□□ -0.45
PCDHB17P-201ENST00000539533 TMEM263Q8WUH6 116 aaKnown RBP12.25□□□□□ -0.45
PCDHB17P-201ENST00000539533 WIPF1O43516 503 aa12.25□□□□□ -0.45
PCDHB17P-201ENST00000539533 NHLRC4P0CG21 123 aaPredicted RBP12.25□□□□□ -0.45
PCDHB17P-201ENST00000539533 IL17DQ8TAD2 202 aa12.25□□□□□ -0.45
PCDHB17P-201ENST00000539533 NACAE9PAV3 2078 aa12.24□□□□□ -0.45
PCDHB17P-201ENST00000539533 TMEM223A0PJW6 202 aa12.24□□□□□ -0.45
PCDHB17P-201ENST00000539533 C9JAW5 83 aa12.24□□□□□ -0.45
PCDHB17P-201ENST00000539533 LEPROTO15243 131 aa12.24□□□□□ -0.45
PCDHB17P-201ENST00000539533 OXLD1Q5BKU9 147 aa12.24□□□□□ -0.45
PCDHB17P-201ENST00000539533 PIK3CD-AS1Q5SR53 167 aa12.24□□□□□ -0.45
PCDHB17P-201ENST00000539533 NBEAL2Q6ZNJ1 2754 aa12.23□□□□□ -0.45
PCDHB17P-201ENST00000539533 A4D1N5 150 aa12.23□□□□□ -0.45
PCDHB17P-201ENST00000539533 TRGV1A0A0A0MS02 117 aa12.22□□□□□ -0.45
PCDHB17P-201ENST00000539533 P0DMU3 169 aa12.22□□□□□ -0.45
PCDHB17P-201ENST00000539533 FAM231AP0DMU4 169 aa12.22□□□□□ -0.45
PCDHB17P-201ENST00000539533 FAM231CP0DMU5 169 aa12.22□□□□□ -0.45
PCDHB17P-201ENST00000539533 PLAC8L1A1L4L8 177 aa12.22□□□□□ -0.45
PCDHB17P-201ENST00000539533 RHODO00212 210 aa12.22□□□□□ -0.45
PCDHB17P-201ENST00000539533 SNCGO76070 127 aa12.22□□□□□ -0.45
PCDHB17P-201ENST00000539533 GAGE2BQ13066 116 aa12.22□□□□□ -0.45
PCDHB17P-201ENST00000539533 GAGE2EQ4V326 116 aa12.22□□□□□ -0.45
PCDHB17P-201ENST00000539533 NOP10Q9NPE3 64 aaKnown RBP12.22□□□□□ -0.45
PCDHB17P-201ENST00000539533 GAGE2DQ9UEU5 116 aa12.22□□□□□ -0.45
PCDHB17P-201ENST00000539533 ZNF22P17026 224 aaPredicted RBP12.21□□□□□ -0.45
PCDHB17P-201ENST00000539533 Q6ZSN1 163 aa12.21□□□□□ -0.45
PCDHB17P-201ENST00000539533 Q6ZTI0 123 aa12.21□□□□□ -0.45
PCDHB17P-201ENST00000539533 C20orf203Q8NBC4 194 aa12.21□□□□□ -0.45
PCDHB17P-201ENST00000539533 EIF4EBP3O60516 100 aaPredicted RBP12.21□□□□□ -0.46
PCDHB17P-201ENST00000539533 IGHV3-64A0A075B6Q5 118 aa12.2□□□□□ -0.46
PCDHB17P-201ENST00000539533 TRAV4A0A0B4J268 109 aa12.2□□□□□ -0.46
PCDHB17P-201ENST00000539533 NDUFV3P56181 108 aaKnown RBP12.2□□□□□ -0.46
PCDHB17P-201ENST00000539533 C16orf74Q96GX8 76 aa12.2□□□□□ -0.46
PCDHB17P-201ENST00000539533 RS1O15537 224 aa12.2□□□□□ -0.46
PCDHB17P-201ENST00000539533 IGHV3-33P01772 117 aa12.2□□□□□ -0.46
PCDHB17P-201ENST00000539533 Q9UF83 564 aa12.2□□□□□ -0.46
PCDHB17P-201ENST00000539533 CMYA5Q8N3K9 4069 aa12.2□□□□□ -0.46
PCDHB17P-201ENST00000539533 H7C2G1 150 aa12.19□□□□□ -0.46
PCDHB17P-201ENST00000539533 I3L3M4 83 aa12.19□□□□□ -0.46
PCDHB17P-201ENST00000539533 A0A0J9YXV3 536 aa12.19□□□□□ -0.46
PCDHB17P-201ENST00000539533 MUSTN1Q8IVN3 82 aa12.19□□□□□ -0.46
PCDHB17P-201ENST00000539533 NTN5Q8WTR8 489 aaPredicted RBP12.19□□□□□ -0.46
PCDHB17P-201ENST00000539533 IGLV4-3A0A075B6K6 122 aa12.18□□□□□ -0.46
PCDHB17P-201ENST00000539533 A0A0B4J2C4 111 aa12.18□□□□□ -0.46
PCDHB17P-201ENST00000539533 DAZ2Q13117 558 aaKnown RBP12.18□□□□□ -0.46
PCDHB17P-201ENST00000539533 CCDC179H3BU77 68 aa12.18□□□□□ -0.46
PCDHB17P-201ENST00000539533 M0QXV9 152 aa12.18□□□□□ -0.46
PCDHB17P-201ENST00000539533 KRTAP10-11P60412 298 aa12.18□□□□□ -0.46
PCDHB17P-201ENST00000539533 TTC32Q5I0X7 151 aa12.18□□□□□ -0.46
PCDHB17P-201ENST00000539533 GAGE12JA6NER3 117 aa12.16□□□□□ -0.46
PCDHB17P-201ENST00000539533 GAGE7O76087 117 aa12.16□□□□□ -0.46
PCDHB17P-201ENST00000539533 IGHV3-53P01767 116 aa12.16□□□□□ -0.46
PCDHB17P-201ENST00000539533 GAGE12FP0CL80 117 aa12.16□□□□□ -0.46
PCDHB17P-201ENST00000539533 GAGE12GP0CL81 117 aa12.16□□□□□ -0.46
PCDHB17P-201ENST00000539533 GAGE12IP0CL82 117 aa12.16□□□□□ -0.46
PCDHB17P-201ENST00000539533 GAGE4Q13068 117 aa12.16□□□□□ -0.46
PCDHB17P-201ENST00000539533 IFITM1P13164 125 aa12.16□□□□□ -0.46
PCDHB17P-201ENST00000539533 EDA2RQ9HAV5 297 aa12.16□□□□□ -0.46
PCDHB17P-201ENST00000539533 IGHV4-30-4P0DP06 118 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms