RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 GEMIN7Q9H840 131 aaKnown RBP12.79□□□□□ -0.36
GNE-204ENST00000539208 TRAV8-3A0A0A6YYJ7 113 aa12.78□□□□□ -0.36
GNE-204ENST00000539208 G3V4G9 280 aa12.78□□□□□ -0.36
GNE-204ENST00000539208 LY6G6DO95868 133 aa12.78□□□□□ -0.36
GNE-204ENST00000539208 FAM19A3Q7Z5A8 133 aa12.78□□□□□ -0.36
GNE-204ENST00000539208 RPL24P83731 157 aaKnown RBP12.77□□□□□ -0.36
GNE-204ENST00000539208 NTM-AS1Q6ZSK4 140 aa12.77□□□□□ -0.36
GNE-204ENST00000539208 SBSPONQ8IVN8 264 aa12.77□□□□□ -0.36
GNE-204ENST00000539208 SETXQ7Z333 2677 aaKnown RBP12.77□□□□□ -0.36
GNE-204ENST00000539208 SMAGPQ0VAQ4 97 aa12.77□□□□□ -0.37
GNE-204ENST00000539208 GTSF1LQ9H1H1 148 aa12.77□□□□□ -0.37
GNE-204ENST00000539208 MTORP42345 2549 aa12.77□□□□□ -0.37
GNE-204ENST00000539208 LINC00482Q8N8I6 264 aa12.76□□□□□ -0.37
GNE-204ENST00000539208 PRO1854Q9UHT4 67 aa12.76□□□□□ -0.37
GNE-204ENST00000539208 TRBV6-4A0A1B0GX49 114 aa12.76□□□□□ -0.37
GNE-204ENST00000539208 GAGE13Q4V321 117 aa12.76□□□□□ -0.37
GNE-204ENST00000539208 LYRM7Q5U5X0 104 aa12.76□□□□□ -0.37
GNE-204ENST00000539208 MUSTN1Q8IVN3 82 aa12.76□□□□□ -0.37
GNE-204ENST00000539208 LITAFQ99732 161 aa12.76□□□□□ -0.37
GNE-204ENST00000539208 NDUFA12Q9UI09 145 aa12.76□□□□□ -0.37
GNE-204ENST00000539208 TRGV2A0A075B6R0 118 aa12.75□□□□□ -0.37
GNE-204ENST00000539208 A4D1N5 150 aa12.75□□□□□ -0.37
GNE-204ENST00000539208 GAGE7O76087 117 aa12.75□□□□□ -0.37
GNE-204ENST00000539208 GAGE12FP0CL80 117 aa12.75□□□□□ -0.37
GNE-204ENST00000539208 GAGE12GP0CL81 117 aa12.75□□□□□ -0.37
GNE-204ENST00000539208 GAGE12IP0CL82 117 aa12.75□□□□□ -0.37
GNE-204ENST00000539208 VPS25Q9BRG1 176 aa12.75□□□□□ -0.37
GNE-204ENST00000539208 PRO0461Q9UI25 63 aa12.75□□□□□ -0.37
GNE-204ENST00000539208 GAGE12JA6NER3 117 aa12.74□□□□□ -0.37
GNE-204ENST00000539208 PF4P02776 101 aa12.74□□□□□ -0.37
GNE-204ENST00000539208 SPINK8P0C7L1 97 aa12.74□□□□□ -0.37
GNE-204ENST00000539208 LINC00694P0DN24 101 aa12.74□□□□□ -0.37
GNE-204ENST00000539208 GAGE4Q13068 117 aa12.74□□□□□ -0.37
GNE-204ENST00000539208 GAGE5Q13069 117 aa12.74□□□□□ -0.37
GNE-204ENST00000539208 ZFAND6Q6FIF0 208 aa12.74□□□□□ -0.37
GNE-204ENST00000539208 A0A0B4J2C4 111 aa12.74□□□□□ -0.37
GNE-204ENST00000539208 HERVK_113P63121 156 aa12.74□□□□□ -0.37
GNE-204ENST00000539208 CDKN2A-AS1Q9UH64 79 aa12.74□□□□□ -0.37
GNE-204ENST00000539208 SETD2Q9BYW2 2564 aaPredicted RBP12.73□□□□□ -0.37
GNE-204ENST00000539208 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.73□□□□□ -0.37
GNE-204ENST00000539208 WFDC2Q14508 124 aa12.73□□□□□ -0.37
GNE-204ENST00000539208 SPANXDQ9BXN6 97 aa12.73□□□□□ -0.37
GNE-204ENST00000539208 SPANXCQ9NY87 97 aa12.73□□□□□ -0.37
GNE-204ENST00000539208 NIPBLQ6KC79 2804 aaeCLIP12.73□□□□□ -0.37
GNE-204ENST00000539208 LOC107984156A0A0G2JMH3 177 aa12.72□□□□□ -0.37
GNE-204ENST00000539208 LINC00242Q5T6M2 205 aa12.72□□□□□ -0.37
GNE-204ENST00000539208 ARL17AQ8IVW1 177 aa12.72□□□□□ -0.37
GNE-204ENST00000539208 HIVEP2P31629 2446 aa12.72□□□□□ -0.37
GNE-204ENST00000539208 H7C423 109 aa12.71□□□□□ -0.37
GNE-204ENST00000539208 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.71□□□□□ -0.37
GNE-204ENST00000539208 TIMM17BO60830 172 aa12.71□□□□□ -0.37
GNE-204ENST00000539208 TMEM101Q96IK0 257 aa12.71□□□□□ -0.37
GNE-204ENST00000539208 CDC42SE2Q9NRR3 84 aa12.71□□□□□ -0.37
GNE-204ENST00000539208 TRBV20-1A0A075B6N2 111 aa12.7□□□□□ -0.38
GNE-204ENST00000539208 IGLV5-39A0A0G2JS06 123 aa12.7□□□□□ -0.38
GNE-204ENST00000539208 TEX48A0A1B0GUV7 120 aa12.7□□□□□ -0.38
GNE-204ENST00000539208 EIF4EBP3O60516 100 aaPredicted RBP12.7□□□□□ -0.38
GNE-204ENST00000539208 COX6A2Q02221 97 aa12.7□□□□□ -0.38
GNE-204ENST00000539208 TMEM243Q9BU79 118 aa12.7□□□□□ -0.38
GNE-204ENST00000539208 IGHV3-33P01772 117 aa12.7□□□□□ -0.38
GNE-204ENST00000539208 INSL3P51460 131 aa12.7□□□□□ -0.38
GNE-204ENST00000539208 FASNP49327 2511 aaKnown RBP12.7□□□□□ -0.38
GNE-204ENST00000539208 TRGV4A0A0C4DH28 118 aa12.69□□□□□ -0.38
GNE-204ENST00000539208 A8MZ25 164 aa12.69□□□□□ -0.38
GNE-204ENST00000539208 NDUFA1O15239 70 aa12.69□□□□□ -0.38
GNE-204ENST00000539208 FHL2Q14192 279 aa12.69□□□□□ -0.38
GNE-204ENST00000539208 RNF183Q96D59 192 aa12.69□□□□□ -0.38
GNE-204ENST00000539208 MIAQ16674 131 aa12.69□□□□□ -0.38
GNE-204ENST00000539208 ADAMTSL4-AS1Q5T5F5 129 aa12.69□□□□□ -0.38
GNE-204ENST00000539208 PSMB2P49721 201 aa12.68□□□□□ -0.38
GNE-204ENST00000539208 KIR2DL5BQ8NHK3 375 aa12.68□□□□□ -0.38
GNE-204ENST00000539208 ERG28Q9UKR5 140 aa12.67□□□□□ -0.38
GNE-204ENST00000539208 UBE2L6O14933 153 aa12.67□□□□□ -0.38
GNE-204ENST00000539208 SFTA2Q6UW10 78 aa12.67□□□□□ -0.38
GNE-204ENST00000539208 LINC00612Q8N6U2 182 aa12.67□□□□□ -0.38
GNE-204ENST00000539208 JMJD1CQ15652 2540 aa12.67□□□□□ -0.38
GNE-204ENST00000539208 LOC100131303A0A0U1RQF7 123 aa12.66□□□□□ -0.38
GNE-204ENST00000539208 PRSS2P07478 247 aa12.66□□□□□ -0.38
GNE-204ENST00000539208 ETDBQ3ZM63 59 aa12.66□□□□□ -0.38
GNE-204ENST00000539208 TCL1BO95988 128 aa12.65□□□□□ -0.38
GNE-204ENST00000539208 IFITM1P13164 125 aa12.65□□□□□ -0.38
GNE-204ENST00000539208 TRAV13-1A0A0B4J241 112 aa12.64□□□□□ -0.39
GNE-204ENST00000539208 SMIM1B2RUZ4 78 aa12.64□□□□□ -0.39
GNE-204ENST00000539208 INAFM1C9JVW0 142 aa12.64□□□□□ -0.39
GNE-204ENST00000539208 PCP4P48539 62 aa12.64□□□□□ -0.39
GNE-204ENST00000539208 C9orf66Q5T8R8 295 aa12.64□□□□□ -0.39
GNE-204ENST00000539208 GCN1Q92616 2671 aaKnown RBP12.64□□□□□ -0.39
GNE-204ENST00000539208 SMIM9A6NGZ8 99 aa12.64□□□□□ -0.39
GNE-204ENST00000539208 SH2D6Q7Z4S9 175 aa12.64□□□□□ -0.39
GNE-204ENST00000539208 J3QR89 54 aa12.63□□□□□ -0.39
GNE-204ENST00000539208 CRLF1O75462 422 aa12.63□□□□□ -0.39
GNE-204ENST00000539208 SCGB1C2P0DMR2 95 aa12.63□□□□□ -0.39
GNE-204ENST00000539208 MTURNQ8N3F0 131 aa12.63□□□□□ -0.39
GNE-204ENST00000539208 F5H768 121 aa12.63□□□□□ -0.39
GNE-204ENST00000539208 SMCPP49901 116 aaPredicted RBP12.63□□□□□ -0.39
GNE-204ENST00000539208 CIRBPQ14011 172 aaKnown RBP12.63□□□□□ -0.39
GNE-204ENST00000539208 ATP6V0E2Q8NHE4 81 aa12.63□□□□□ -0.39
GNE-204ENST00000539208 TRBV6-8A0A0A6YYG3 113 aa12.62□□□□□ -0.39
GNE-204ENST00000539208 X6R8D5 127 aa12.62□□□□□ -0.39
GNE-204ENST00000539208 Q9H8V8 135 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms