RNA–Protein interactions for RNA: ENST00000536675.2

CDH20-202, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH20, Length 2,855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-202ENST00000536675 MSMBP08118 114 aa10.43□□□□□ -0.74
CDH20-202ENST00000536675 BAALC-AS2P0C853 105 aa10.43□□□□□ -0.74
CDH20-202ENST00000536675 HOXD3P31249 432 aaPredicted RBP10.43□□□□□ -0.74
CDH20-202ENST00000536675 PIK3CD-AS1Q5SR53 167 aa10.43□□□□□ -0.74
CDH20-202ENST00000536675 IGHV4-30-2A0A087WSY4 118 aa10.43□□□□□ -0.74
CDH20-202ENST00000536675 CFAP161Q6P656 301 aa10.43□□□□□ -0.74
CDH20-202ENST00000536675 NDUFA7O95182 113 aa10.42□□□□□ -0.74
CDH20-202ENST00000536675 HERVK_113P63121 156 aa10.42□□□□□ -0.74
CDH20-202ENST00000536675 SDIM1Q6ZPB5 146 aa10.42□□□□□ -0.74
CDH20-202ENST00000536675 SMIM1B2RUZ4 78 aa10.42□□□□□ -0.74
CDH20-202ENST00000536675 FAM218AQ96MZ4 157 aa10.42□□□□□ -0.74
CDH20-202ENST00000536675 A8MTW9 85 aa10.41□□□□□ -0.74
CDH20-202ENST00000536675 TRACP01848 142 aa10.41□□□□□ -0.74
CDH20-202ENST00000536675 C11orf72Q8NBR9 251 aa10.41□□□□□ -0.74
CDH20-202ENST00000536675 PRORYQ9H606 182 aa10.41□□□□□ -0.74
CDH20-202ENST00000536675 TMEM89A2RUT3 159 aa10.41□□□□□ -0.74
CDH20-202ENST00000536675 C3orf22Q8N5N4 141 aa10.4□□□□□ -0.74
CDH20-202ENST00000536675 SPG11Q96JI7 2443 aa10.4□□□□□ -0.74
CDH20-202ENST00000536675 LINC00694P0DN24 101 aa10.4□□□□□ -0.74
CDH20-202ENST00000536675 UCNP55089 124 aa10.4□□□□□ -0.74
CDH20-202ENST00000536675 DEFB112Q30KQ8 113 aa10.4□□□□□ -0.74
CDH20-202ENST00000536675 PRIMA1Q86XR5 153 aa10.4□□□□□ -0.74
CDH20-202ENST00000536675 COPS9Q8WXC6 57 aa10.4□□□□□ -0.74
CDH20-202ENST00000536675 C9orf153Q5TBE3 101 aa10.4□□□□□ -0.75
CDH20-202ENST00000536675 CSMD2Q7Z408 3487 aa10.39□□□□□ -0.75
CDH20-202ENST00000536675 CCL19Q99731 98 aa10.39□□□□□ -0.75
CDH20-202ENST00000536675 PEMTQ9UBM1 199 aa10.39□□□□□ -0.75
CDH20-202ENST00000536675 VPREB3Q9UKI3 123 aa10.39□□□□□ -0.75
CDH20-202ENST00000536675 TRAV13-1A0A0B4J241 112 aa10.39□□□□□ -0.75
CDH20-202ENST00000536675 RS1O15537 224 aa10.39□□□□□ -0.75
CDH20-202ENST00000536675 LY6DQ14210 128 aa10.38□□□□□ -0.75
CDH20-202ENST00000536675 C5orf38Q86SI9 138 aa10.38□□□□□ -0.75
CDH20-202ENST00000536675 PPDPFQ9H3Y8 114 aa10.38□□□□□ -0.75
CDH20-202ENST00000536675 FAM19A3Q7Z5A8 133 aa10.37□□□□□ -0.75
CDH20-202ENST00000536675 UQCRQO14949 82 aa10.37□□□□□ -0.75
CDH20-202ENST00000536675 Q9HAA7 133 aa10.37□□□□□ -0.75
CDH20-202ENST00000536675 SLURP1P55000 103 aa10.36□□□□□ -0.75
CDH20-202ENST00000536675 ATP5J2P56134 94 aa10.36□□□□□ -0.75
CDH20-202ENST00000536675 FAM222AQ5U5X8 452 aa10.36□□□□□ -0.75
CDH20-202ENST00000536675 GAGE2AQ6NT46 116 aa10.36□□□□□ -0.75
CDH20-202ENST00000536675 F5H768 121 aa10.36□□□□□ -0.75
CDH20-202ENST00000536675 CXCL5P42830 114 aa10.36□□□□□ -0.75
CDH20-202ENST00000536675 DEFB136Q30KP8 78 aa10.36□□□□□ -0.75
CDH20-202ENST00000536675 LINC00526Q96FQ7 95 aa10.36□□□□□ -0.75
CDH20-202ENST00000536675 C18orf65Q6ZTR6 163 aa10.35□□□□□ -0.75
CDH20-202ENST00000536675 UBE2E2Q96LR5 201 aa10.35□□□□□ -0.75
CDH20-202ENST00000536675 ATP5G1P05496 136 aa10.35□□□□□ -0.75
CDH20-202ENST00000536675 INAFM2P0DMQ5 153 aa10.34□□□□□ -0.75
CDH20-202ENST00000536675 MALP21145 153 aa10.34□□□□□ -0.75
CDH20-202ENST00000536675 HIST2H2BCQ6DN03 193 aa10.34□□□□□ -0.75
CDH20-202ENST00000536675 HIST2H2BDQ6DRA6 164 aa10.34□□□□□ -0.75
CDH20-202ENST00000536675 B4DSR2 109 aa10.34□□□□□ -0.75
CDH20-202ENST00000536675 NTM-AS1Q6ZSK4 140 aa10.33□□□□□ -0.76
CDH20-202ENST00000536675 RPL28P46779 137 aaKnown RBP10.33□□□□□ -0.76
CDH20-202ENST00000536675 Q96MF0 132 aa10.33□□□□□ -0.76
CDH20-202ENST00000536675 MAP6D1Q9H9H5 199 aa10.33□□□□□ -0.76
CDH20-202ENST00000536675 CDC42SE2Q9NRR3 84 aa10.32□□□□□ -0.76
CDH20-202ENST00000536675 KLK5Q9Y337 293 aaPredicted RBP10.32□□□□□ -0.76
CDH20-202ENST00000536675 CSDC2Q9Y534 153 aaKnown RBP10.32□□□□□ -0.76
CDH20-202ENST00000536675 INSP01308 110 aa10.32□□□□□ -0.76
CDH20-202ENST00000536675 GNLYP22749 145 aa10.32□□□□□ -0.76
CDH20-202ENST00000536675 LINC00337Q8N6G1 96 aa10.32□□□□□ -0.76
CDH20-202ENST00000536675 TRAV13-2A0A0B4J235 113 aa10.31□□□□□ -0.76
CDH20-202ENST00000536675 C2orf48Q96LS8 159 aa10.31□□□□□ -0.76
CDH20-202ENST00000536675 ZNF702PQ9H963 129 aa10.31□□□□□ -0.76
CDH20-202ENST00000536675 COX7CP15954 63 aa10.31□□□□□ -0.76
CDH20-202ENST00000536675 C9orf129Q5T035 196 aaKnown RBP10.31□□□□□ -0.76
CDH20-202ENST00000536675 ZANQ9Y493 2812 aa10.31□□□□□ -0.76
CDH20-202ENST00000536675 CRPP02741 224 aa10.3□□□□□ -0.76
CDH20-202ENST00000536675 HIST1H4AP62805 103 aaKnown RBP10.3□□□□□ -0.76
CDH20-202ENST00000536675 XCL2Q9UBD3 114 aa10.3□□□□□ -0.76
CDH20-202ENST00000536675 IGKV2-28A0A075B6P5 120 aa10.3□□□□□ -0.76
CDH20-202ENST00000536675 A0A087WYN8 130 aa10.3□□□□□ -0.76
CDH20-202ENST00000536675 TRGV1A0A0A0MS02 117 aa10.3□□□□□ -0.76
CDH20-202ENST00000536675 IGKV2D-28P01615 120 aa10.3□□□□□ -0.76
CDH20-202ENST00000536675 PF4P02776 101 aa10.3□□□□□ -0.76
CDH20-202ENST00000536675 NCOR2Q9Y618 2525 aa10.29□□□□□ -0.76
CDH20-202ENST00000536675 MXRA5Q9NR99 2828 aa10.29□□□□□ -0.76
CDH20-202ENST00000536675 RPL36AP83881 106 aaKnown RBP10.29□□□□□ -0.76
CDH20-202ENST00000536675 RPL36ALQ969Q0 106 aaKnown RBP10.29□□□□□ -0.76
CDH20-202ENST00000536675 LOC107984640A0A0U1RRK4 108 aa10.29□□□□□ -0.76
CDH20-202ENST00000536675 MIR7-3HGQ8N6C7 128 aa10.29□□□□□ -0.76
CDH20-202ENST00000536675 ITPR1Q14643 2758 aa10.29□□□□□ -0.76
CDH20-202ENST00000536675 NRGNQ92686 78 aa10.28□□□□□ -0.76
CDH20-202ENST00000536675 K7EQD1 137 aa10.28□□□□□ -0.76
CDH20-202ENST00000536675 SMIM11BQ8TCY0 68 aa10.28□□□□□ -0.76
CDH20-202ENST00000536675 SND1-IT1Q9HBX3 110 aa10.28□□□□□ -0.76
CDH20-202ENST00000536675 C14orf132Q9NPU4 83 aa10.27□□□□□ -0.77
CDH20-202ENST00000536675 C2CD3Q4AC94 2353 aa10.27□□□□□ -0.77
CDH20-202ENST00000536675 DNAL4O96015 105 aa10.27□□□□□ -0.77
CDH20-202ENST00000536675 IL17DQ8TAD2 202 aa10.27□□□□□ -0.77
CDH20-202ENST00000536675 CHD8Q9HCK8 2581 aa10.26□□□□□ -0.77
CDH20-202ENST00000536675 ATOX1O00244 68 aa10.26□□□□□ -0.77
CDH20-202ENST00000536675 CRYGAP11844 174 aa10.26□□□□□ -0.77
CDH20-202ENST00000536675 COX7B2Q8TF08 81 aa10.26□□□□□ -0.77
CDH20-202ENST00000536675 TRBV10-1A0A0K0K1A3 114 aa10.26□□□□□ -0.77
CDH20-202ENST00000536675 Q6ZTI0 123 aa10.26□□□□□ -0.77
CDH20-202ENST00000536675 C1orf158Q8N1D5 194 aa10.26□□□□□ -0.77
CDH20-202ENST00000536675 DYNLRB2Q8TF09 96 aa10.25□□□□□ -0.77
CDH20-202ENST00000536675 OVOL2Q9BRP0 275 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 182.8 ms