RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 TMEM101Q96IK0 257 aa14.94□□□□□ -0.02
SFSWAP-204ENST00000535399 IGLV5-52A0A0A0MRZ9 124 aa14.93□□□□□ -0.02
SFSWAP-204ENST00000535399 SVBPQ8N300 66 aa14.93□□□□□ -0.02
SFSWAP-204ENST00000535399 IGKV3OR2-268A0A0C4DH90 116 aa14.92□□□□□ -0.02
SFSWAP-204ENST00000535399 CDC42SE2Q9NRR3 84 aa14.92□□□□□ -0.02
SFSWAP-204ENST00000535399 SNAPINO95295 136 aa14.91□□□□□ -0.02
SFSWAP-204ENST00000535399 KRTAP10-1P60331 282 aa14.91□□□□□ -0.02
SFSWAP-204ENST00000535399 MAP1LC3AQ9H492 121 aa14.91□□□□□ -0.02
SFSWAP-204ENST00000535399 UBE2D4Q9Y2X8 147 aa14.91□□□□□ -0.02
SFSWAP-204ENST00000535399 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.9□□□□□ -0.02
SFSWAP-204ENST00000535399 USP17L23D6RBM5 183 aa14.9□□□□□ -0.02
SFSWAP-204ENST00000535399 GCSHP23434 173 aa14.9□□□□□ -0.02
SFSWAP-204ENST00000535399 GNB1LQ9BYB4 327 aa14.9□□□□□ -0.02
SFSWAP-204ENST00000535399 CSDC2Q9Y534 153 aaKnown RBP14.9□□□□□ -0.02
SFSWAP-204ENST00000535399 HSPG2P98160 4391 aa14.89□□□□□ -0.03
SFSWAP-204ENST00000535399 LOC389332A0A1B0GUA5 103 aa14.89□□□□□ -0.03
SFSWAP-204ENST00000535399 KIAA1644Q3SXP7 199 aa14.89□□□□□ -0.03
SFSWAP-204ENST00000535399 ZNF664Q8N3J9 261 aa14.89□□□□□ -0.03
SFSWAP-204ENST00000535399 TMEM18Q96B42 140 aa14.89□□□□□ -0.03
SFSWAP-204ENST00000535399 TIMM21Q9BVV7 248 aa14.89□□□□□ -0.03
SFSWAP-204ENST00000535399 CDK2AP2O75956 126 aa14.88□□□□□ -0.03
SFSWAP-204ENST00000535399 RPL39P62891 51 aaKnown RBP14.88□□□□□ -0.03
SFSWAP-204ENST00000535399 SMAGPQ0VAQ4 97 aa14.88□□□□□ -0.03
SFSWAP-204ENST00000535399 C14orf177Q52M58 125 aa14.88□□□□□ -0.03
SFSWAP-204ENST00000535399 RAB5AP20339 215 aa14.87□□□□□ -0.03
SFSWAP-204ENST00000535399 COX19Q49B96 90 aa14.87□□□□□ -0.03
SFSWAP-204ENST00000535399 DGAT2L7PQ6IED9 249 aa14.87□□□□□ -0.03
SFSWAP-204ENST00000535399 SLC7A5P1Q8MH63 180 aa14.87□□□□□ -0.03
SFSWAP-204ENST00000535399 Q8N8P6 123 aa14.87□□□□□ -0.03
SFSWAP-204ENST00000535399 CHCHD10Q8WYQ3 142 aaPredicted RBP14.87□□□□□ -0.03
SFSWAP-204ENST00000535399 LINC00959A0A1B0GUT2 108 aa14.86□□□□□ -0.03
SFSWAP-204ENST00000535399 GAGE12HA6NDE8 117 aa14.86□□□□□ -0.03
SFSWAP-204ENST00000535399 TGIF2-C20orf24A0A0A6YYL0 155 aa14.85□□□□□ -0.03
SFSWAP-204ENST00000535399 Q6ZUT4 128 aa14.84□□□□□ -0.03
SFSWAP-204ENST00000535399 MT-ND6P03923 174 aa14.83□□□□□ -0.04
SFSWAP-204ENST00000535399 PRSS1P07477 247 aa14.83□□□□□ -0.04
SFSWAP-204ENST00000535399 FAM104AQ969W3 186 aa14.83□□□□□ -0.04
SFSWAP-204ENST00000535399 DNAH8Q96JB1 4490 aa14.83□□□□□ -0.04
SFSWAP-204ENST00000535399 FOXI1Q12951 378 aa14.82□□□□□ -0.04
SFSWAP-204ENST00000535399 RNASE13Q5GAN3 156 aaKnown RBP14.82□□□□□ -0.04
SFSWAP-204ENST00000535399 MRPL18Q9H0U6 180 aaKnown RBP14.82□□□□□ -0.04
SFSWAP-204ENST00000535399 NXT2Q9NPJ8 142 aaKnown RBP14.82□□□□□ -0.04
SFSWAP-204ENST00000535399 SPANXA1Q9NS26 97 aa14.82□□□□□ -0.04
SFSWAP-204ENST00000535399 CCL25O15444 150 aa14.81□□□□□ -0.04
SFSWAP-204ENST00000535399 ALKBH7Q9BT30 221 aaPredicted RBP14.81□□□□□ -0.04
SFSWAP-204ENST00000535399 IFI27P40305 119 aaPredicted RBP14.8□□□□□ -0.04
SFSWAP-204ENST00000535399 XCL1P47992 114 aa14.8□□□□□ -0.04
SFSWAP-204ENST00000535399 FABP9Q0Z7S8 132 aa14.8□□□□□ -0.04
SFSWAP-204ENST00000535399 SS18Q15532 418 aa14.8□□□□□ -0.04
SFSWAP-204ENST00000535399 YPEL4Q96NS1 127 aa14.8□□□□□ -0.04
SFSWAP-204ENST00000535399 K7EMI3 77 aa14.79□□□□□ -0.04
SFSWAP-204ENST00000535399 MRPS36P82909 103 aaKnown RBP14.79□□□□□ -0.04
SFSWAP-204ENST00000535399 OPRPNQ99935 248 aaPredicted RBP14.79□□□□□ -0.04
SFSWAP-204ENST00000535399 LINC01620Q4KN68 170 aa14.78□□□□□ -0.04
SFSWAP-204ENST00000535399 C15orf56Q8N910 161 aa14.78□□□□□ -0.04
SFSWAP-204ENST00000535399 PYGO1Q9Y3Y4 419 aa14.78□□□□□ -0.04
SFSWAP-204ENST00000535399 XGP55808 180 aa14.77□□□□□ -0.05
SFSWAP-204ENST00000535399 ORMDL2Q53FV1 153 aa14.77□□□□□ -0.05
SFSWAP-204ENST00000535399 TRAV13-1A0A0B4J241 112 aa14.76□□□□□ -0.05
SFSWAP-204ENST00000535399 C1orf196B1AJZ1 125 aa14.76□□□□□ -0.05
SFSWAP-204ENST00000535399 CFAP161Q6P656 301 aa14.76□□□□□ -0.05
SFSWAP-204ENST00000535399 CD164L2Q6UWJ8 174 aa14.76□□□□□ -0.05
SFSWAP-204ENST00000535399 FAM30AQ9NZY2 134 aa14.76□□□□□ -0.05
SFSWAP-204ENST00000535399 hDV102S1A0JD36 115 aa14.75□□□□□ -0.05
SFSWAP-204ENST00000535399 C2orf66Q6UXQ4 117 aa14.75□□□□□ -0.05
SFSWAP-204ENST00000535399 KRTAP17-1Q9BYP8 105 aa14.75□□□□□ -0.05
SFSWAP-204ENST00000535399 CYSLTR1Q9Y271 337 aa14.75□□□□□ -0.05
SFSWAP-204ENST00000535399 TRAPPC1Q9Y5R8 145 aa14.75□□□□□ -0.05
SFSWAP-204ENST00000535399 IGLV4-3A0A075B6K6 122 aa14.74□□□□□ -0.05
SFSWAP-204ENST00000535399 Q6ZSA8 131 aa14.73□□□□□ -0.05
SFSWAP-204ENST00000535399 PRSS3P2Q8NHM4 247 aa14.73□□□□□ -0.05
SFSWAP-204ENST00000535399 LINC01546A6NGU7 62 aa14.72□□□□□ -0.05
SFSWAP-204ENST00000535399 SLPIP03973 132 aa14.72□□□□□ -0.05
SFSWAP-204ENST00000535399 CNBPP62633 177 aaKnown RBP14.72□□□□□ -0.05
SFSWAP-204ENST00000535399 CBLN2Q8IUK8 224 aa14.72□□□□□ -0.05
SFSWAP-204ENST00000535399 HIGD2BQ4VC39 106 aa14.71□□□□□ -0.05
SFSWAP-204ENST00000535399 SMCO4Q9NRQ5 59 aa14.71□□□□□ -0.05
SFSWAP-204ENST00000535399 GVQW2A0A096LPI5 108 aaPredicted RBP14.7□□□□□ -0.06
SFSWAP-204ENST00000535399 IGIPA6NJ69 53 aa14.7□□□□□ -0.06
SFSWAP-204ENST00000535399 IFITM10A6NMD0 228 aa14.7□□□□□ -0.06
SFSWAP-204ENST00000535399 C9orf163Q8N9P6 203 aa14.7□□□□□ -0.06
SFSWAP-204ENST00000535399 TMEM141Q96I45 108 aa14.7□□□□□ -0.06
SFSWAP-204ENST00000535399 AP5S1Q9NUS5 200 aa14.7□□□□□ -0.06
SFSWAP-204ENST00000535399 IGHV1-58A0A0C4DH39 117 aa14.69□□□□□ -0.06
SFSWAP-204ENST00000535399 HAMPP81172 84 aa14.69□□□□□ -0.06
SFSWAP-204ENST00000535399 G0S2P27469 103 aa14.68□□□□□ -0.06
SFSWAP-204ENST00000535399 TOMM6Q96B49 74 aa14.68□□□□□ -0.06
SFSWAP-204ENST00000535399 COX7A2LO14548 114 aa14.67□□□□□ -0.06
SFSWAP-204ENST00000535399 NPSP0C0P6 89 aa14.67□□□□□ -0.06
SFSWAP-204ENST00000535399 FA2HQ7L5A8 372 aa14.66□□□□□ -0.06
SFSWAP-204ENST00000535399 C18orf32Q8TCD1 76 aa14.66□□□□□ -0.06
SFSWAP-204ENST00000535399 AMELXQ99217 191 aa14.66□□□□□ -0.06
SFSWAP-204ENST00000535399 FAT1Q14517 4588 aa14.65□□□□□ -0.06
SFSWAP-204ENST00000535399 ZC2HC1BQ5TFG8 222 aa14.65□□□□□ -0.06
SFSWAP-204ENST00000535399 TEX43Q6ZNM6 134 aa14.65□□□□□ -0.06
SFSWAP-204ENST00000535399 LINC00173Q6ZV60 143 aa14.65□□□□□ -0.06
SFSWAP-204ENST00000535399 C5orf38Q86SI9 138 aa14.65□□□□□ -0.06
SFSWAP-204ENST00000535399 Q8N1X5 172 aa14.65□□□□□ -0.06
SFSWAP-204ENST00000535399 IGHV3OR16-9A0A0B4J2B5 98 aa14.64□□□□□ -0.07
SFSWAP-204ENST00000535399 Q6ZN92 141 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms