RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 PIK3CD-AS1Q5SR53 167 aa8.36□□□□□ -1.07
AMBRA1-211ENST00000533727 C20orf173Q96LM9 149 aa8.36□□□□□ -1.07
AMBRA1-211ENST00000533727 DSCAML1Q8TD84 2053 aa8.36□□□□□ -1.07
AMBRA1-211ENST00000533727 Q6ZS46 218 aa8.36□□□□□ -1.07
AMBRA1-211ENST00000533727 IGHV1-58A0A0C4DH39 117 aa8.35□□□□□ -1.07
AMBRA1-211ENST00000533727 CLUHP3Q96NS8 147 aa8.35□□□□□ -1.07
AMBRA1-211ENST00000533727 FAM236DA0A1B0GTK5 79 aa8.35□□□□□ -1.07
AMBRA1-211ENST00000533727 FAM236CP0DP71 79 aa8.35□□□□□ -1.07
AMBRA1-211ENST00000533727 UBE2AP49459 152 aa8.35□□□□□ -1.07
AMBRA1-211ENST00000533727 SPTBN4Q9H254 2564 aa8.35□□□□□ -1.07
AMBRA1-211ENST00000533727 ABCA2Q9BZC7 2435 aa8.35□□□□□ -1.07
AMBRA1-211ENST00000533727 TRAV23DV6A0A075B6W5 121 aa8.35□□□□□ -1.07
AMBRA1-211ENST00000533727 ZFAND2AQ8N6M9 145 aa8.35□□□□□ -1.07
AMBRA1-211ENST00000533727 MRGPRG-AS1Q2M3A8 158 aa8.34□□□□□ -1.07
AMBRA1-211ENST00000533727 MRPL55Q7Z7F7 128 aaKnown RBP8.34□□□□□ -1.07
AMBRA1-211ENST00000533727 DEFB105AQ8NG35 78 aa8.34□□□□□ -1.07
AMBRA1-211ENST00000533727 REG3AQ06141 175 aa8.34□□□□□ -1.07
AMBRA1-211ENST00000533727 C4orf48Q5BLP8 95 aa8.34□□□□□ -1.07
AMBRA1-211ENST00000533727 C18orf65Q6ZTR6 163 aa8.34□□□□□ -1.07
AMBRA1-211ENST00000533727 C14orf132Q9NPU4 83 aa8.34□□□□□ -1.07
AMBRA1-211ENST00000533727 TMEM256-PLSCR3K7ERE1 68 aa8.33□□□□□ -1.08
AMBRA1-211ENST00000533727 PDE6GP18545 87 aa8.33□□□□□ -1.08
AMBRA1-211ENST00000533727 V9GYY9 64 aa8.33□□□□□ -1.08
AMBRA1-211ENST00000533727 MIAQ16674 131 aa8.33□□□□□ -1.08
AMBRA1-211ENST00000533727 PROK1P58294 105 aa8.33□□□□□ -1.08
AMBRA1-211ENST00000533727 UFSP1Q6NVU6 142 aa8.32□□□□□ -1.08
AMBRA1-211ENST00000533727 LINC00322Q6ZN03 302 aaPredicted RBP8.32□□□□□ -1.08
AMBRA1-211ENST00000533727 DCANP1Q8TF63 244 aa8.32□□□□□ -1.08
AMBRA1-211ENST00000533727 IGHV4-4A0A075B6R2 117 aa8.32□□□□□ -1.08
AMBRA1-211ENST00000533727 NDUFS5O43920 106 aa8.32□□□□□ -1.08
AMBRA1-211ENST00000533727 ZNF80P51504 273 aaPredicted RBP8.32□□□□□ -1.08
AMBRA1-211ENST00000533727 KPRPQ5T749 579 aaPredicted RBP8.32□□□□□ -1.08
AMBRA1-211ENST00000533727 Q8N2B8 174 aa8.32□□□□□ -1.08
AMBRA1-211ENST00000533727 KIAA1549Q9HCM3 1950 aa8.32□□□□□ -1.08
AMBRA1-211ENST00000533727 FAM240AA0A1B0GVK7 77 aa8.32□□□□□ -1.08
AMBRA1-211ENST00000533727 CFAP126Q5VTH2 177 aa8.32□□□□□ -1.08
AMBRA1-211ENST00000533727 MLST8Q9BVC4 326 aa8.32□□□□□ -1.08
AMBRA1-211ENST00000533727 KLLNB2CW77 178 aa8.32□□□□□ -1.08
AMBRA1-211ENST00000533727 LELP1Q5T871 98 aa8.31□□□□□ -1.08
AMBRA1-211ENST00000533727 SDIM1Q6ZPB5 146 aa8.31□□□□□ -1.08
AMBRA1-211ENST00000533727 ZNF462Q96JM2 2506 aa8.31□□□□□ -1.08
AMBRA1-211ENST00000533727 A0A0U1RQV1 116 aa8.31□□□□□ -1.08
AMBRA1-211ENST00000533727 MIR7-3HGQ8N6C7 128 aa8.31□□□□□ -1.08
AMBRA1-211ENST00000533727 UPK3BQ9BT76 320 aa8.31□□□□□ -1.08
AMBRA1-211ENST00000533727 TRBV6-8A0A0A6YYG3 113 aa8.31□□□□□ -1.08
AMBRA1-211ENST00000533727 A0A0J9YXY3 114 aa8.31□□□□□ -1.08
AMBRA1-211ENST00000533727 PLXNB1O43157 2135 aa8.31□□□□□ -1.08
AMBRA1-211ENST00000533727 IGKV2D-26A0A0A0MRZ7 120 aa8.31□□□□□ -1.08
AMBRA1-211ENST00000533727 IMUPQ9GZP8 106 aa8.31□□□□□ -1.08
AMBRA1-211ENST00000533727 U3KQK5 164 aa8.3□□□□□ -1.08
AMBRA1-211ENST00000533727 HIGD2BQ4VC39 106 aa8.3□□□□□ -1.08
AMBRA1-211ENST00000533727 NDUFC2-KCTD14E9PQ53 114 aa8.3□□□□□ -1.08
AMBRA1-211ENST00000533727 HIST2H2BDQ6DRA6 164 aa8.3□□□□□ -1.08
AMBRA1-211ENST00000533727 LINC00269Q8N2A0 174 aa8.3□□□□□ -1.08
AMBRA1-211ENST00000533727 LY6G6CO95867 125 aa8.29□□□□□ -1.08
AMBRA1-211ENST00000533727 ATP5EP2Q5VTU8 51 aa8.29□□□□□ -1.08
AMBRA1-211ENST00000533727 C2orf91Q6ZV80 131 aa8.29□□□□□ -1.08
AMBRA1-211ENST00000533727 C7orf33Q8WU49 177 aa8.29□□□□□ -1.08
AMBRA1-211ENST00000533727 ODF3L2Q3SX64 289 aa8.29□□□□□ -1.08
AMBRA1-211ENST00000533727 MPLKIPQ8TAP9 179 aa8.29□□□□□ -1.08
AMBRA1-211ENST00000533727 B9D2Q9BPU9 175 aa8.29□□□□□ -1.08
AMBRA1-211ENST00000533727 CHCHD7Q9BUK0 85 aa8.29□□□□□ -1.08
AMBRA1-211ENST00000533727 XGP55808 180 aa8.29□□□□□ -1.08
AMBRA1-211ENST00000533727 MAPKAPK5-AS1Q8N8E1 139 aa8.29□□□□□ -1.08
AMBRA1-211ENST00000533727 SPTSSBQ8NFR3 76 aa8.29□□□□□ -1.08
AMBRA1-211ENST00000533727 CCDC179H3BU77 68 aa8.29□□□□□ -1.08
AMBRA1-211ENST00000533727 A0A0J9YWU9 116 aa8.28□□□□□ -1.08
AMBRA1-211ENST00000533727 NEXN-AS1Q8NBZ9 246 aa8.28□□□□□ -1.08
AMBRA1-211ENST00000533727 CHCHD10Q8WYQ3 142 aaPredicted RBP8.28□□□□□ -1.08
AMBRA1-211ENST00000533727 CHKB-CPT1BH3BT56 60 aa8.28□□□□□ -1.08
AMBRA1-211ENST00000533727 MYO9AB2RTY4 2548 aa8.28□□□□□ -1.08
AMBRA1-211ENST00000533727 TRBV30A0A0K0K1B3 111 aa8.27□□□□□ -1.08
AMBRA1-211ENST00000533727 SERP2Q8N6R1 65 aa8.27□□□□□ -1.08
AMBRA1-211ENST00000533727 C2CD3Q4AC94 2353 aa8.27□□□□□ -1.09
AMBRA1-211ENST00000533727 TNRC6BQ9UPQ9 1833 aaKnown RBP8.27□□□□□ -1.09
AMBRA1-211ENST00000533727 MRPS12O15235 138 aaKnown RBP8.27□□□□□ -1.09
AMBRA1-211ENST00000533727 NDUFB1O75438 58 aa8.27□□□□□ -1.09
AMBRA1-211ENST00000533727 TRBV6-5A0A0K0K1A5 114 aa8.27□□□□□ -1.09
AMBRA1-211ENST00000533727 WFDC10AQ9H1F0 79 aa8.27□□□□□ -1.09
AMBRA1-211ENST00000533727 TRIAP1O43715 76 aa8.26□□□□□ -1.09
AMBRA1-211ENST00000533727 CPAMD8Q8IZJ3 1885 aa8.26□□□□□ -1.09
AMBRA1-211ENST00000533727 DIRC1Q969H9 104 aa8.26□□□□□ -1.09
AMBRA1-211ENST00000533727 JMJD1CQ15652 2540 aa8.25□□□□□ -1.09
AMBRA1-211ENST00000533727 C9orf85Q96MD7 179 aa8.25□□□□□ -1.09
AMBRA1-211ENST00000533727 ZFYVE26Q68DK2 2539 aa8.25□□□□□ -1.09
AMBRA1-211ENST00000533727 COX7CP15954 63 aa8.25□□□□□ -1.09
AMBRA1-211ENST00000533727 M0QY20 66 aa8.25□□□□□ -1.09
AMBRA1-211ENST00000533727 RAI1Q7Z5J4 1906 aaPredicted RBP8.25□□□□□ -1.09
AMBRA1-211ENST00000533727 FASNP49327 2511 aaKnown RBP8.25□□□□□ -1.09
AMBRA1-211ENST00000533727 EXPH5Q8NEV8 1989 aa8.24□□□□□ -1.09
AMBRA1-211ENST00000533727 NANOS2P60321 138 aaKnown RBP8.24□□□□□ -1.09
AMBRA1-211ENST00000533727 PTPRBP23467 1997 aa8.24□□□□□ -1.09
AMBRA1-211ENST00000533727 BPY2O14599 106 aa8.24□□□□□ -1.09
AMBRA1-211ENST00000533727 NCR3O14931 201 aa8.24□□□□□ -1.09
AMBRA1-211ENST00000533727 SYCNQ0VAF6 134 aa8.24□□□□□ -1.09
AMBRA1-211ENST00000533727 ATG2AQ2TAZ0 1938 aa8.24□□□□□ -1.09
AMBRA1-211ENST00000533727 USP17L23D6RBM5 183 aa8.23□□□□□ -1.09
AMBRA1-211ENST00000533727 Q8N976 141 aa8.23□□□□□ -1.09
AMBRA1-211ENST00000533727 M0QXV9 152 aa8.23□□□□□ -1.09
AMBRA1-211ENST00000533727 IGKV2-24A0A0C4DH68 120 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms