RNA–Protein interactions for RNA: ENST00000532751.1

PTPRK-222, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 4

Gene PTPRK, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-222ENST00000532751 KRTAP10-1P60331 282 aa14.43□□□□□ -0.1
PTPRK-222ENST00000532751 RHEBQ15382 184 aa14.43□□□□□ -0.1
PTPRK-222ENST00000532751 DGAT2L7PQ6IED9 249 aa14.43□□□□□ -0.1
PTPRK-222ENST00000532751 KRTAP26-1Q6PEX3 210 aa14.43□□□□□ -0.1
PTPRK-222ENST00000532751 USP17L23D6RBM5 183 aa14.42□□□□□ -0.1
PTPRK-222ENST00000532751 CLRN3Q8NCR9 226 aa14.42□□□□□ -0.1
PTPRK-222ENST00000532751 RYR1P21817 5038 aa14.42□□□□□ -0.1
PTPRK-222ENST00000532751 RPS10P5Q9NQ39 176 aa14.41□□□□□ -0.1
PTPRK-222ENST00000532751 NDUFA5Q16718 116 aa14.4□□□□□ -0.1
PTPRK-222ENST00000532751 MAP1LC3AQ9H492 121 aa14.39□□□□□ -0.11
PTPRK-222ENST00000532751 CDC42SE2Q9NRR3 84 aa14.39□□□□□ -0.11
PTPRK-222ENST00000532751 CSDC2Q9Y534 153 aaKnown RBP14.39□□□□□ -0.11
PTPRK-222ENST00000532751 APOBP04114 4563 aaKnown RBP14.38□□□□□ -0.11
PTPRK-222ENST00000532751 RAB5AP20339 215 aa14.38□□□□□ -0.11
PTPRK-222ENST00000532751 ZNF664Q8N3J9 261 aa14.38□□□□□ -0.11
PTPRK-222ENST00000532751 CHCHD10Q8WYQ3 142 aaPredicted RBP14.38□□□□□ -0.11
PTPRK-222ENST00000532751 UBE2D4Q9Y2X8 147 aa14.38□□□□□ -0.11
PTPRK-222ENST00000532751 GAGE12HA6NDE8 117 aa14.37□□□□□ -0.11
PTPRK-222ENST00000532751 PRSS47A8MTI9 375 aa14.37□□□□□ -0.11
PTPRK-222ENST00000532751 APOC3P02656 99 aa14.37□□□□□ -0.11
PTPRK-222ENST00000532751 TIMM21Q9BVV7 248 aa14.37□□□□□ -0.11
PTPRK-222ENST00000532751 LOC389332A0A1B0GUA5 103 aa14.36□□□□□ -0.11
PTPRK-222ENST00000532751 COX19Q49B96 90 aa14.36□□□□□ -0.11
PTPRK-222ENST00000532751 LINC00959A0A1B0GUT2 108 aa14.35□□□□□ -0.11
PTPRK-222ENST00000532751 SNAPINO95295 136 aa14.35□□□□□ -0.11
PTPRK-222ENST00000532751 SS18Q15532 418 aa14.35□□□□□ -0.11
PTPRK-222ENST00000532751 PRSS1P07477 247 aa14.34□□□□□ -0.11
PTPRK-222ENST00000532751 CFAP161Q6P656 301 aa14.34□□□□□ -0.11
PTPRK-222ENST00000532751 SVBPQ8N300 66 aa14.34□□□□□ -0.11
PTPRK-222ENST00000532751 RPL39P62891 51 aaKnown RBP14.33□□□□□ -0.12
PTPRK-222ENST00000532751 Q8N8P6 123 aa14.33□□□□□ -0.12
PTPRK-222ENST00000532751 GNB1LQ9BYB4 327 aa14.33□□□□□ -0.12
PTPRK-222ENST00000532751 HSPG2P98160 4391 aa14.32□□□□□ -0.12
PTPRK-222ENST00000532751 SPANXA1Q9NS26 97 aa14.32□□□□□ -0.12
PTPRK-222ENST00000532751 hDV102S1A0JD36 115 aa14.31□□□□□ -0.12
PTPRK-222ENST00000532751 CCL25O15444 150 aa14.31□□□□□ -0.12
PTPRK-222ENST00000532751 XCL1P47992 114 aa14.31□□□□□ -0.12
PTPRK-222ENST00000532751 XGP55808 180 aa14.31□□□□□ -0.12
PTPRK-222ENST00000532751 KIAA1644Q3SXP7 199 aa14.31□□□□□ -0.12
PTPRK-222ENST00000532751 AP5S1Q9NUS5 200 aa14.31□□□□□ -0.12
PTPRK-222ENST00000532751 MT-ND6P03923 174 aa14.3□□□□□ -0.12
PTPRK-222ENST00000532751 C1orf196B1AJZ1 125 aa14.29□□□□□ -0.12
PTPRK-222ENST00000532751 K7EMI3 77 aa14.29□□□□□ -0.12
PTPRK-222ENST00000532751 FOXI1Q12951 378 aa14.29□□□□□ -0.12
PTPRK-222ENST00000532751 LINC01620Q4KN68 170 aa14.29□□□□□ -0.12
PTPRK-222ENST00000532751 RNASE13Q5GAN3 156 aaKnown RBP14.29□□□□□ -0.12
PTPRK-222ENST00000532751 Q6ZUT4 128 aa14.29□□□□□ -0.12
PTPRK-222ENST00000532751 NXT2Q9NPJ8 142 aaKnown RBP14.29□□□□□ -0.12
PTPRK-222ENST00000532751 IFI27P40305 119 aaPredicted RBP14.28□□□□□ -0.12
PTPRK-222ENST00000532751 ORMDL2Q53FV1 153 aa14.28□□□□□ -0.12
PTPRK-222ENST00000532751 CD164L2Q6UWJ8 174 aa14.28□□□□□ -0.12
PTPRK-222ENST00000532751 MRPS36P82909 103 aaKnown RBP14.27□□□□□ -0.13
PTPRK-222ENST00000532751 DNAH8Q96JB1 4490 aa14.26□□□□□ -0.13
PTPRK-222ENST00000532751 TRAV13-1A0A0B4J241 112 aa14.26□□□□□ -0.13
PTPRK-222ENST00000532751 Q8N1X5 172 aa14.26□□□□□ -0.13
PTPRK-222ENST00000532751 C15orf56Q8N910 161 aa14.26□□□□□ -0.13
PTPRK-222ENST00000532751 FAM30AQ9NZY2 134 aa14.26□□□□□ -0.13
PTPRK-222ENST00000532751 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.25□□□□□ -0.13
PTPRK-222ENST00000532751 CNBPP62633 177 aaKnown RBP14.25□□□□□ -0.13
PTPRK-222ENST00000532751 FABP9Q0Z7S8 132 aa14.25□□□□□ -0.13
PTPRK-222ENST00000532751 C9orf163Q8N9P6 203 aa14.25□□□□□ -0.13
PTPRK-222ENST00000532751 MRPL18Q9H0U6 180 aaKnown RBP14.25□□□□□ -0.13
PTPRK-222ENST00000532751 CYSLTR1Q9Y271 337 aa14.25□□□□□ -0.13
PTPRK-222ENST00000532751 PYGO1Q9Y3Y4 419 aa14.25□□□□□ -0.13
PTPRK-222ENST00000532751 Q6ZSA8 131 aa14.24□□□□□ -0.13
PTPRK-222ENST00000532751 TGIF2-C20orf24A0A0A6YYL0 155 aa14.23□□□□□ -0.13
PTPRK-222ENST00000532751 IGHV1-58A0A0C4DH39 117 aa14.23□□□□□ -0.13
PTPRK-222ENST00000532751 G0S2P27469 103 aa14.23□□□□□ -0.13
PTPRK-222ENST00000532751 HIGD2BQ4VC39 106 aa14.23□□□□□ -0.13
PTPRK-222ENST00000532751 C2orf66Q6UXQ4 117 aa14.23□□□□□ -0.13
PTPRK-222ENST00000532751 PRSS3P2Q8NHM4 247 aa14.22□□□□□ -0.13
PTPRK-222ENST00000532751 OPRPNQ99935 248 aaPredicted RBP14.22□□□□□ -0.13
PTPRK-222ENST00000532751 ALKBH7Q9BT30 221 aaPredicted RBP14.22□□□□□ -0.13
PTPRK-222ENST00000532751 GVQW2A0A096LPI5 108 aaPredicted RBP14.21□□□□□ -0.13
PTPRK-222ENST00000532751 IFITM10A6NMD0 228 aa14.21□□□□□ -0.13
PTPRK-222ENST00000532751 HAMPP81172 84 aa14.21□□□□□ -0.13
PTPRK-222ENST00000532751 FAM104AQ969W3 186 aa14.21□□□□□ -0.13
PTPRK-222ENST00000532751 COX7A2LO14548 114 aa14.2□□□□□ -0.14
PTPRK-222ENST00000532751 MALP21145 153 aa14.2□□□□□ -0.14
PTPRK-222ENST00000532751 TMEM141Q96I45 108 aa14.2□□□□□ -0.14
PTPRK-222ENST00000532751 TRAPPC1Q9Y5R8 145 aa14.2□□□□□ -0.14
PTPRK-222ENST00000532751 IGLV4-3A0A075B6K6 122 aa14.18□□□□□ -0.14
PTPRK-222ENST00000532751 Q6ZN92 141 aa14.18□□□□□ -0.14
PTPRK-222ENST00000532751 TEX43Q6ZNM6 134 aa14.18□□□□□ -0.14
PTPRK-222ENST00000532751 KRTAP17-1Q9BYP8 105 aa14.18□□□□□ -0.14
PTPRK-222ENST00000532751 IGHV3-64A0A075B6Q5 118 aa14.17□□□□□ -0.14
PTPRK-222ENST00000532751 ZNF561-AS1K7EIQ3 104 aa14.17□□□□□ -0.14
PTPRK-222ENST00000532751 SLPIP03973 132 aa14.17□□□□□ -0.14
PTPRK-222ENST00000532751 NPSP0C0P6 89 aa14.17□□□□□ -0.14
PTPRK-222ENST00000532751 EPM2AB3EWF7 344 aa14.16□□□□□ -0.14
PTPRK-222ENST00000532751 APOMO95445 188 aa14.16□□□□□ -0.14
PTPRK-222ENST00000532751 SMR3BP02814 79 aaPredicted RBP14.16□□□□□ -0.14
PTPRK-222ENST00000532751 SLC7A5P1Q8MH63 180 aa14.16□□□□□ -0.14
PTPRK-222ENST00000532751 C2orf88Q9BSF0 95 aa14.16□□□□□ -0.14
PTPRK-222ENST00000532751 CHAC1Q9BUX1 264 aa14.16□□□□□ -0.14
PTPRK-222ENST00000532751 FA2HQ7L5A8 372 aa14.15□□□□□ -0.14
PTPRK-222ENST00000532751 C5orf38Q86SI9 138 aa14.15□□□□□ -0.14
PTPRK-222ENST00000532751 KRTAP4-5Q9BYR2 181 aa14.15□□□□□ -0.14
PTPRK-222ENST00000532751 SMCO4Q9NRQ5 59 aa14.15□□□□□ -0.14
PTPRK-222ENST00000532751 LINC01549A6NIU2 74 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms