RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 C5orf38Q86SI9 138 aa10.59□□□□□ -0.71
CAPN1-214ENST00000528165 PIMREGQ9BSJ6 248 aa10.59□□□□□ -0.71
CAPN1-214ENST00000528165 FAM222AQ5U5X8 452 aa10.58□□□□□ -0.72
CAPN1-214ENST00000528165 CELSR1Q9NYQ6 3014 aa10.58□□□□□ -0.72
CAPN1-214ENST00000528165 FAM218AQ96MZ4 157 aa10.58□□□□□ -0.72
CAPN1-214ENST00000528165 ATRXP46100 2492 aa10.58□□□□□ -0.72
CAPN1-214ENST00000528165 SMIM1B2RUZ4 78 aa10.57□□□□□ -0.72
CAPN1-214ENST00000528165 DEFB131AP59861 70 aa10.57□□□□□ -0.72
CAPN1-214ENST00000528165 NRGNQ92686 78 aa10.57□□□□□ -0.72
CAPN1-214ENST00000528165 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.57□□□□□ -0.723e-8■■■■□ 20.8
CAPN1-214ENST00000528165 COX7CP15954 63 aa10.57□□□□□ -0.72
CAPN1-214ENST00000528165 C22orf24Q9Y442 160 aa10.57□□□□□ -0.72
CAPN1-214ENST00000528165 TRAV13-1A0A0B4J241 112 aa10.56□□□□□ -0.72
CAPN1-214ENST00000528165 MALP21145 153 aa10.55□□□□□ -0.72
CAPN1-214ENST00000528165 HIST2H2BCQ6DN03 193 aa10.55□□□□□ -0.72
CAPN1-214ENST00000528165 HIST2H2BDQ6DRA6 164 aa10.55□□□□□ -0.72
CAPN1-214ENST00000528165 Q9HAA7 133 aa10.55□□□□□ -0.72
CAPN1-214ENST00000528165 CREBBPQ92793 2442 aa10.55□□□□□ -0.72
CAPN1-214ENST00000528165 KLK5Q9Y337 293 aaPredicted RBP10.55□□□□□ -0.72
CAPN1-214ENST00000528165 HOXD3P31249 432 aaPredicted RBP10.54□□□□□ -0.72
CAPN1-214ENST00000528165 ATOX1O00244 68 aa10.54□□□□□ -0.72
CAPN1-214ENST00000528165 LOC107984640A0A0U1RRK4 108 aa10.53□□□□□ -0.72
CAPN1-214ENST00000528165 TMEM89A2RUT3 159 aa10.53□□□□□ -0.72
CAPN1-214ENST00000528165 RBMY1BA6NDE4 496 aaKnown RBP10.53□□□□□ -0.72
CAPN1-214ENST00000528165 RBMY1EA6NEQ0 496 aaKnown RBP10.53□□□□□ -0.72
CAPN1-214ENST00000528165 RBMY1DP0C7P1 496 aaKnown RBP10.53□□□□□ -0.72
CAPN1-214ENST00000528165 HIVEP3Q5T1R4 2406 aa10.53□□□□□ -0.72
CAPN1-214ENST00000528165 TRAV13-2A0A0B4J235 113 aa10.53□□□□□ -0.72
CAPN1-214ENST00000528165 J3KT08 172 aa10.53□□□□□ -0.72
CAPN1-214ENST00000528165 DNAL4O96015 105 aa10.53□□□□□ -0.72
CAPN1-214ENST00000528165 CRPP02741 224 aa10.52□□□□□ -0.73
CAPN1-214ENST00000528165 PF4P02776 101 aa10.52□□□□□ -0.73
CAPN1-214ENST00000528165 MSMBP08118 114 aa10.52□□□□□ -0.73
CAPN1-214ENST00000528165 FAM19A3Q7Z5A8 133 aa10.52□□□□□ -0.73
CAPN1-214ENST00000528165 C11orf72Q8NBR9 251 aa10.52□□□□□ -0.73
CAPN1-214ENST00000528165 RS1O15537 224 aa10.52□□□□□ -0.73
CAPN1-214ENST00000528165 CRYGAP11844 174 aa10.52□□□□□ -0.73
CAPN1-214ENST00000528165 RPL28P46779 137 aaKnown RBP10.52□□□□□ -0.73
CAPN1-214ENST00000528165 LRRC75A-AS1Q8N1F1 130 aa10.52□□□□□ -0.73
CAPN1-214ENST00000528165 C10orf105Q8TEF2 133 aa10.52□□□□□ -0.73
CAPN1-214ENST00000528165 C2orf48Q96LS8 159 aa10.52□□□□□ -0.73
CAPN1-214ENST00000528165 CSDC2Q9Y534 153 aaKnown RBP10.52□□□□□ -0.73
CAPN1-214ENST00000528165 IGHV4-59P01825 116 aa10.51□□□□□ -0.73
CAPN1-214ENST00000528165 A0A1B0GX51 115 aa10.51□□□□□ -0.73
CAPN1-214ENST00000528165 A8MTW9 85 aa10.51□□□□□ -0.73
CAPN1-214ENST00000528165 HIST1H4AP62805 103 aaKnown RBP10.51□□□□□ -0.73
CAPN1-214ENST00000528165 OVOL2Q9BRP0 275 aa10.51□□□□□ -0.73
CAPN1-214ENST00000528165 F5H768 121 aa10.49□□□□□ -0.73
CAPN1-214ENST00000528165 C19orf84I3L1E1 186 aa10.49□□□□□ -0.73
CAPN1-214ENST00000528165 AVPP01185 164 aa10.49□□□□□ -0.73
CAPN1-214ENST00000528165 UCNP55089 124 aa10.48□□□□□ -0.73
CAPN1-214ENST00000528165 CSPG4Q6UVK1 2322 aa10.48□□□□□ -0.73
CAPN1-214ENST00000528165 hADV29S1A0JD25 119 aa10.48□□□□□ -0.73
CAPN1-214ENST00000528165 IGHV4-30-2A0A087WSY4 118 aa10.48□□□□□ -0.73
CAPN1-214ENST00000528165 RPL18AQ02543 176 aaKnown RBP10.48□□□□□ -0.73
CAPN1-214ENST00000528165 LINC00337Q8N6G1 96 aa10.48□□□□□ -0.73
CAPN1-214ENST00000528165 C14orf132Q9NPU4 83 aa10.48□□□□□ -0.73
CAPN1-214ENST00000528165 IGF2RP11717 2491 aa10.47□□□□□ -0.73
CAPN1-214ENST00000528165 COL12A1Q99715 3063 aa10.47□□□□□ -0.73
CAPN1-214ENST00000528165 INSP01308 110 aa10.47□□□□□ -0.73
CAPN1-214ENST00000528165 NBL1P41271 181 aa10.47□□□□□ -0.73
CAPN1-214ENST00000528165 RPL36AP83881 106 aaKnown RBP10.47□□□□□ -0.73
CAPN1-214ENST00000528165 DEFB112Q30KQ8 113 aa10.47□□□□□ -0.73
CAPN1-214ENST00000528165 RPL36ALQ969Q0 106 aaKnown RBP10.47□□□□□ -0.73
CAPN1-214ENST00000528165 CCL19Q99731 98 aa10.47□□□□□ -0.73
CAPN1-214ENST00000528165 FAM19A5Q7Z5A7 132 aaPredicted RBP10.47□□□□□ -0.73
CAPN1-214ENST00000528165 SND1-IT1Q9HBX3 110 aa10.47□□□□□ -0.73
CAPN1-214ENST00000528165 CDC42SE2Q9NRR3 84 aa10.47□□□□□ -0.73
CAPN1-214ENST00000528165 A0A087WYN8 130 aa10.46□□□□□ -0.73
CAPN1-214ENST00000528165 MIR7-3HGQ8N6C7 128 aa10.46□□□□□ -0.73
CAPN1-214ENST00000528165 UBE2E2Q96LR5 201 aa10.46□□□□□ -0.73
CAPN1-214ENST00000528165 IGKV3D-7A0A0C4DH55 119 aa10.46□□□□□ -0.74
CAPN1-214ENST00000528165 MUC6Q6W4X9 2439 aa10.46□□□□□ -0.74
CAPN1-214ENST00000528165 SLURP1P55000 103 aa10.45□□□□□ -0.74
CAPN1-214ENST00000528165 ATP5J2P56134 94 aa10.45□□□□□ -0.74
CAPN1-214ENST00000528165 NTM-AS1Q6ZSK4 140 aa10.45□□□□□ -0.74
CAPN1-214ENST00000528165 SMIM11BQ8TCY0 68 aa10.45□□□□□ -0.74
CAPN1-214ENST00000528165 IGKV2-28A0A075B6P5 120 aa10.44□□□□□ -0.74
CAPN1-214ENST00000528165 TRGV1A0A0A0MS02 117 aa10.44□□□□□ -0.74
CAPN1-214ENST00000528165 B4DSR2 109 aa10.44□□□□□ -0.74
CAPN1-214ENST00000528165 IGKV2D-28P01615 120 aa10.44□□□□□ -0.74
CAPN1-214ENST00000528165 RPS28P62857 69 aaKnown RBP10.44□□□□□ -0.74
CAPN1-214ENST00000528165 C9orf129Q5T035 196 aaKnown RBP10.44□□□□□ -0.74
CAPN1-214ENST00000528165 Q6JHZ5 121 aa10.44□□□□□ -0.74
CAPN1-214ENST00000528165 Q96MF0 132 aa10.44□□□□□ -0.74
CAPN1-214ENST00000528165 MAP6D1Q9H9H5 199 aa10.44□□□□□ -0.74
CAPN1-214ENST00000528165 H0YGX0 51 aa10.43□□□□□ -0.74
CAPN1-214ENST00000528165 DEFB136Q30KP8 78 aa10.43□□□□□ -0.74
CAPN1-214ENST00000528165 C5orf47Q569G3 176 aa10.43□□□□□ -0.74
CAPN1-214ENST00000528165 LINC00846Q9NV44 126 aa10.43□□□□□ -0.74
CAPN1-214ENST00000528165 COX7B2Q8TF08 81 aa10.43□□□□□ -0.74
CAPN1-214ENST00000528165 TOMM7Q9P0U1 55 aa10.43□□□□□ -0.74
CAPN1-214ENST00000528165 VPS13CQ709C8 3753 aa10.43□□□□□ -0.74
CAPN1-214ENST00000528165 SMIM9A6NGZ8 99 aa10.43□□□□□ -0.74
CAPN1-214ENST00000528165 K7EQD1 137 aa10.43□□□□□ -0.74
CAPN1-214ENST00000528165 UBE2L6O14933 153 aa10.43□□□□□ -0.74
CAPN1-214ENST00000528165 TRBV10-1A0A0K0K1A3 114 aa10.42□□□□□ -0.74
CAPN1-214ENST00000528165 LINC00158P58513 81 aa10.42□□□□□ -0.74
CAPN1-214ENST00000528165 SERP2Q8N6R1 65 aa10.42□□□□□ -0.74
CAPN1-214ENST00000528165 XCL2Q9UBD3 114 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms