RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 H3BNG1 76 aa6.43□□□□□ -1.38
SDCBP-212ENST00000523483 SYS1-DBNDD2H3BUS1 97 aa6.43□□□□□ -1.38
SDCBP-212ENST00000523483 RBX1P62877 108 aa6.43□□□□□ -1.38
SDCBP-212ENST00000523483 LYSTQ99698 3801 aa6.43□□□□□ -1.38
SDCBP-212ENST00000523483 TEX43Q6ZNM6 134 aa6.42□□□□□ -1.38
SDCBP-212ENST00000523483 BAALCQ8WXS3 180 aa6.42□□□□□ -1.38
SDCBP-212ENST00000523483 TMEM141Q96I45 108 aa6.42□□□□□ -1.38
SDCBP-212ENST00000523483 WWC2-AS2Q96NR7 200 aa6.42□□□□□ -1.38
SDCBP-212ENST00000523483 IGLV4-3A0A075B6K6 122 aa6.42□□□□□ -1.38
SDCBP-212ENST00000523483 LINC00588Q9Y4M8 146 aa6.42□□□□□ -1.38
SDCBP-212ENST00000523483 LINC01546A6NGU7 62 aa6.42□□□□□ -1.38
SDCBP-212ENST00000523483 IGIPA6NJ69 53 aa6.42□□□□□ -1.38
SDCBP-212ENST00000523483 LINC00269Q8N2A0 174 aa6.42□□□□□ -1.38
SDCBP-212ENST00000523483 C20orf202A1L168 122 aa6.41□□□□□ -1.38
SDCBP-212ENST00000523483 SPATA12Q7Z6I5 190 aa6.41□□□□□ -1.38
SDCBP-212ENST00000523483 UBE2WQ96B02 151 aa6.41□□□□□ -1.38
SDCBP-212ENST00000523483 Q9HAA7 133 aa6.41□□□□□ -1.38
SDCBP-212ENST00000523483 SPANXA1Q9NS26 97 aa6.41□□□□□ -1.38
SDCBP-212ENST00000523483 MRPL35Q9NZE8 188 aaKnown RBP6.41□□□□□ -1.38
SDCBP-212ENST00000523483 TIMM17AQ99595 171 aa6.41□□□□□ -1.38
SDCBP-212ENST00000523483 PYY3Q5JQD4 70 aa6.4□□□□□ -1.38
SDCBP-212ENST00000523483 PAPPA-AS1Q5QFB9 102 aa6.4□□□□□ -1.38
SDCBP-212ENST00000523483 C2orf88Q9BSF0 95 aa6.4□□□□□ -1.38
SDCBP-212ENST00000523483 CHTOPQ9Y3Y2 248 aaKnown RBP6.4□□□□□ -1.38
SDCBP-212ENST00000523483 CRPP02741 224 aa6.4□□□□□ -1.39
SDCBP-212ENST00000523483 SMAGPQ0VAQ4 97 aa6.4□□□□□ -1.39
SDCBP-212ENST00000523483 PMVKQ15126 192 aa6.4□□□□□ -1.39
SDCBP-212ENST00000523483 ZNF664Q8N3J9 261 aa6.4□□□□□ -1.39
SDCBP-212ENST00000523483 CDPF1Q6NVV7 123 aa6.39□□□□□ -1.39
SDCBP-212ENST00000523483 APLNQ9ULZ1 77 aa6.39□□□□□ -1.39
SDCBP-212ENST00000523483 IGHV3-64A0A075B6Q5 118 aa6.39□□□□□ -1.39
SDCBP-212ENST00000523483 A0A0J9YXV3 536 aa6.39□□□□□ -1.39
SDCBP-212ENST00000523483 SIVA1O15304 175 aa6.39□□□□□ -1.39
SDCBP-212ENST00000523483 XCL1P47992 114 aa6.39□□□□□ -1.39
SDCBP-212ENST00000523483 TMEM170BQ5T4T1 132 aa6.39□□□□□ -1.39
SDCBP-212ENST00000523483 CDC42SE2Q9NRR3 84 aa6.39□□□□□ -1.39
SDCBP-212ENST00000523483 CST9LQ9H4G1 147 aa6.39□□□□□ -1.39
SDCBP-212ENST00000523483 GEMIN7Q9H840 131 aaKnown RBP6.39□□□□□ -1.39
SDCBP-212ENST00000523483 LINC01549A6NIU2 74 aa6.38□□□□□ -1.39
SDCBP-212ENST00000523483 MAJINQ3KP22 176 aa6.38□□□□□ -1.39
SDCBP-212ENST00000523483 M0R2N4 97 aa6.38□□□□□ -1.39
SDCBP-212ENST00000523483 LY6G6CO95867 125 aa6.38□□□□□ -1.39
SDCBP-212ENST00000523483 REG3AQ06141 175 aa6.38□□□□□ -1.39
SDCBP-212ENST00000523483 ODF1Q14990 250 aa6.38□□□□□ -1.39
SDCBP-212ENST00000523483 PET117Q6UWS5 81 aa6.38□□□□□ -1.39
SDCBP-212ENST00000523483 CHAC1Q9BUX1 264 aa6.38□□□□□ -1.39
SDCBP-212ENST00000523483 Q9H8V8 135 aa6.38□□□□□ -1.39
SDCBP-212ENST00000523483 PAM16Q9Y3D7 125 aa6.38□□□□□ -1.39
SDCBP-212ENST00000523483 PYGO1Q9Y3Y4 419 aa6.38□□□□□ -1.39
SDCBP-212ENST00000523483 STARD9Q9P2P6 4700 aa6.38□□□□□ -1.39
SDCBP-212ENST00000523483 ZNF25P17030 456 aaPredicted RBP6.37□□□□□ -1.39
SDCBP-212ENST00000523483 LINC00469Q8N7U9 141 aa6.37□□□□□ -1.39
SDCBP-212ENST00000523483 hDV102S1A0JD36 115 aa6.37□□□□□ -1.39
SDCBP-212ENST00000523483 MRPL52Q86TS9 123 aaKnown RBP6.37□□□□□ -1.39
SDCBP-212ENST00000523483 STPG4Q8N801 248 aa6.37□□□□□ -1.39
SDCBP-212ENST00000523483 F8VRH5 84 aa6.37□□□□□ -1.39
SDCBP-212ENST00000523483 JOSD1Q15040 202 aaPredicted RBP6.37□□□□□ -1.39
SDCBP-212ENST00000523483 H7C423 109 aa6.36□□□□□ -1.39
SDCBP-212ENST00000523483 DPM2O94777 84 aa6.36□□□□□ -1.39
SDCBP-212ENST00000523483 C11orf86A6NJI1 115 aa6.36□□□□□ -1.39
SDCBP-212ENST00000523483 IGKCP01834 107 aa6.36□□□□□ -1.39
SDCBP-212ENST00000523483 C5orf38Q86SI9 138 aa6.36□□□□□ -1.39
SDCBP-212ENST00000523483 FAM104AQ969W3 186 aa6.36□□□□□ -1.39
SDCBP-212ENST00000523483 PLECQ15149 4684 aaKnown RBP6.36□□□□□ -1.39
SDCBP-212ENST00000523483 IGKV2D-24A0A075B6R9 120 aa6.36□□□□□ -1.39
SDCBP-212ENST00000523483 HSBP1L1C9JCN9 74 aa6.36□□□□□ -1.39
SDCBP-212ENST00000523483 CCL25O15444 150 aa6.36□□□□□ -1.39
SDCBP-212ENST00000523483 CASC10Q5T4H9 136 aa6.36□□□□□ -1.39
SDCBP-212ENST00000523483 C12orf57Q99622 126 aa6.36□□□□□ -1.39
SDCBP-212ENST00000523483 MRPS16Q9Y3D3 137 aaKnown RBP6.36□□□□□ -1.39
SDCBP-212ENST00000523483 LINC01545Q5VT33 79 aa6.35□□□□□ -1.39
SDCBP-212ENST00000523483 TIMM21Q9BVV7 248 aa6.35□□□□□ -1.39
SDCBP-212ENST00000523483 A0A1B0GUV1 79 aa6.35□□□□□ -1.39
SDCBP-212ENST00000523483 S100A12P80511 92 aa6.35□□□□□ -1.39
SDCBP-212ENST00000523483 SS18Q15532 418 aa6.35□□□□□ -1.39
SDCBP-212ENST00000523483 LGALS9CQ6DKI2 356 aa6.35□□□□□ -1.39
SDCBP-212ENST00000523483 VAMP8Q9BV40 100 aa6.35□□□□□ -1.39
SDCBP-212ENST00000523483 CSDC2Q9Y534 153 aaKnown RBP6.34□□□□□ -1.39
SDCBP-212ENST00000523483 NMUP48645 174 aa6.34□□□□□ -1.39
SDCBP-212ENST00000523483 TIRAPP58753 221 aa6.34□□□□□ -1.39
SDCBP-212ENST00000523483 PKIAP61925 76 aa6.34□□□□□ -1.39
SDCBP-212ENST00000523483 MRPS36P82909 103 aaKnown RBP6.34□□□□□ -1.39
SDCBP-212ENST00000523483 AMELXQ99217 191 aa6.34□□□□□ -1.39
SDCBP-212ENST00000523483 TOMM7Q9P0U1 55 aa6.34□□□□□ -1.39
SDCBP-212ENST00000523483 LINC00959A0A1B0GUT2 108 aa6.34□□□□□ -1.39
SDCBP-212ENST00000523483 COX6A2Q02221 97 aa6.34□□□□□ -1.39
SDCBP-212ENST00000523483 TRAV12-1A0A0B4J245 112 aa6.33□□□□□ -1.4
SDCBP-212ENST00000523483 SPINK8P0C7L1 97 aa6.33□□□□□ -1.4
SDCBP-212ENST00000523483 UBE2D1P51668 147 aa6.33□□□□□ -1.4
SDCBP-212ENST00000523483 CDKN2A-AS1Q9UH64 79 aa6.33□□□□□ -1.4
SDCBP-212ENST00000523483 IGLV4-69A0A075B6H9 119 aa6.33□□□□□ -1.4
SDCBP-212ENST00000523483 PLNP26678 52 aa6.33□□□□□ -1.4
SDCBP-212ENST00000523483 LINC01556Q5JQF7 62 aa6.33□□□□□ -1.4
SDCBP-212ENST00000523483 LINC00242Q5T6M2 205 aa6.33□□□□□ -1.4
SDCBP-212ENST00000523483 CHCHD10Q8WYQ3 142 aaPredicted RBP6.33□□□□□ -1.4
SDCBP-212ENST00000523483 C1orf43Q9BWL3 253 aa6.33□□□□□ -1.4
SDCBP-212ENST00000523483 DNAH7Q8WXX0 4024 aa6.32□□□□□ -1.4
SDCBP-212ENST00000523483 TRAV9-2A0A087WT02 112 aa6.32□□□□□ -1.4
SDCBP-212ENST00000523483 TRAV8-3A0A0A6YYJ7 113 aa6.32□□□□□ -1.4
SDCBP-212ENST00000523483 ENHOQ6UWT2 76 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms