RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 S100A8P05109 93 aa2.1□□□□□ -2.07
VPS13B-209ENST00000521559 MGPP08493 103 aa2.1□□□□□ -2.07
VPS13B-209ENST00000521559 SMIM17P0DL12 118 aa2.1□□□□□ -2.07
VPS13B-209ENST00000521559 RHEBQ15382 184 aa2.1□□□□□ -2.07
VPS13B-209ENST00000521559 RHOHQ15669 191 aa2.1□□□□□ -2.07
VPS13B-209ENST00000521559 MRPL23Q16540 153 aaKnown RBP2.1□□□□□ -2.07
VPS13B-209ENST00000521559 FAM74A4Q5TZK3 123 aa2.1□□□□□ -2.07
VPS13B-209ENST00000521559 SMIM15Q7Z3B0 74 aa2.1□□□□□ -2.07
VPS13B-209ENST00000521559 SVBPQ8N300 66 aa2.1□□□□□ -2.07
VPS13B-209ENST00000521559 SLC25A29Q8N8R3 303 aa2.1□□□□□ -2.07
VPS13B-209ENST00000521559 GATD1Q8NB37 220 aa2.1□□□□□ -2.07
VPS13B-209ENST00000521559 AP1S3Q96PC3 154 aa2.1□□□□□ -2.07
VPS13B-209ENST00000521559 TMEM191AQ9H0A3 160 aa2.1□□□□□ -2.07
VPS13B-209ENST00000521559 DPH3P1Q9H4G8 78 aa2.1□□□□□ -2.07
VPS13B-209ENST00000521559 ICOSQ9Y6W8 199 aa2.1□□□□□ -2.07
VPS13B-209ENST00000521559 NBEAL1Q6ZS30 2694 aa2.1□□□□□ -2.07
VPS13B-209ENST00000521559 MEGF8Q7Z7M0 2845 aa2.09□□□□□ -2.07
VPS13B-209ENST00000521559 PKD1L1Q8TDX9 2849 aa2.09□□□□□ -2.07
VPS13B-209ENST00000521559 TRBV7-3A0A075B6L6 115 aa2.09□□□□□ -2.07
VPS13B-209ENST00000521559 A0A096LPF7 62 aa2.09□□□□□ -2.07
VPS13B-209ENST00000521559 A0A1B0GWB2 263 aa2.09□□□□□ -2.07
VPS13B-209ENST00000521559 A0A1B0GXF2 115 aa2.09□□□□□ -2.07
VPS13B-209ENST00000521559 PCP4L1A6NKN8 68 aa2.09□□□□□ -2.07
VPS13B-209ENST00000521559 H7C1H1 209 aa2.09□□□□□ -2.07
VPS13B-209ENST00000521559 P0DMU3 169 aa2.09□□□□□ -2.07
VPS13B-209ENST00000521559 FAM231AP0DMU4 169 aa2.09□□□□□ -2.07
VPS13B-209ENST00000521559 FAM231CP0DMU5 169 aa2.09□□□□□ -2.07
VPS13B-209ENST00000521559 LINC00694P0DN24 101 aa2.09□□□□□ -2.07
VPS13B-209ENST00000521559 RAB4AP20338 218 aa2.09□□□□□ -2.07
VPS13B-209ENST00000521559 S100PP25815 95 aa2.09□□□□□ -2.07
VPS13B-209ENST00000521559 SRIP30626 198 aa2.09□□□□□ -2.07
VPS13B-209ENST00000521559 HNRNPA3P51991 378 aaKnown RBP2.09□□□□□ -2.07
VPS13B-209ENST00000521559 CCL18P55774 89 aa2.09□□□□□ -2.07
VPS13B-209ENST00000521559 UBE2D3P61077 147 aa2.09□□□□□ -2.07
VPS13B-209ENST00000521559 UBE2D2P62837 147 aa2.09□□□□□ -2.07
VPS13B-209ENST00000521559 HBBP68871 147 aa2.09□□□□□ -2.07
VPS13B-209ENST00000521559 ZNF56Q15929 161 aa2.09□□□□□ -2.07
VPS13B-209ENST00000521559 ESRGQ1W209 222 aa2.09□□□□□ -2.07
VPS13B-209ENST00000521559 FAM104BQ5XKR9 115 aa2.09□□□□□ -2.07
VPS13B-209ENST00000521559 LGALS9CQ6DKI2 356 aa2.09□□□□□ -2.07
VPS13B-209ENST00000521559 RASL11AQ6T310 242 aa2.09□□□□□ -2.07
VPS13B-209ENST00000521559 LYPD5Q6UWN5 251 aa2.09□□□□□ -2.07
VPS13B-209ENST00000521559 NEGR1Q7Z3B1 354 aa2.09□□□□□ -2.07
VPS13B-209ENST00000521559 ATP5L2Q7Z4Y8 100 aa2.09□□□□□ -2.07
VPS13B-209ENST00000521559 ATP6V0E2Q8NHE4 81 aa2.09□□□□□ -2.07
VPS13B-209ENST00000521559 ZNRF2Q8NHG8 242 aa2.09□□□□□ -2.07
VPS13B-209ENST00000521559 FRZBQ92765 325 aa2.09□□□□□ -2.07
VPS13B-209ENST00000521559 MRAP2Q96G30 205 aa2.09□□□□□ -2.07
VPS13B-209ENST00000521559 RNF185Q96GF1 192 aa2.09□□□□□ -2.07
VPS13B-209ENST00000521559 BTF3L4Q96K17 158 aa2.09□□□□□ -2.07
VPS13B-209ENST00000521559 DNAJC30Q96LL9 226 aa2.09□□□□□ -2.07
VPS13B-209ENST00000521559 DNHD1Q96M86 4753 aa2.08□□□□□ -2.08
VPS13B-209ENST00000521559 TRBV6-5A0A0K0K1A5 114 aa2.08□□□□□ -2.08
VPS13B-209ENST00000521559 LCE6AA0A183 80 aa2.08□□□□□ -2.08
VPS13B-209ENST00000521559 LY6G6CO95867 125 aa2.08□□□□□ -2.08
VPS13B-209ENST00000521559 PPP1R17O96001 155 aa2.08□□□□□ -2.08
VPS13B-209ENST00000521559 PPBPP02775 128 aa2.08□□□□□ -2.08
VPS13B-209ENST00000521559 COX19Q49B96 90 aa2.08□□□□□ -2.08
VPS13B-209ENST00000521559 MRPL51Q4U2R6 128 aaKnown RBP2.08□□□□□ -2.08
VPS13B-209ENST00000521559 MRPL54Q6P161 138 aaKnown RBP2.08□□□□□ -2.08
VPS13B-209ENST00000521559 TMEM136Q6ZRR5 245 aa2.08□□□□□ -2.08
VPS13B-209ENST00000521559 DAZ4Q86SG3 579 aaKnown RBP2.08□□□□□ -2.08
VPS13B-209ENST00000521559 AMN1Q8IY45 258 aa2.08□□□□□ -2.08
VPS13B-209ENST00000521559 UPK3BQ9BT76 320 aa2.08□□□□□ -2.08
VPS13B-209ENST00000521559 GNB1LQ9BYB4 327 aa2.08□□□□□ -2.08
VPS13B-209ENST00000521559 GTSF1LQ9H1H1 148 aa2.08□□□□□ -2.08
VPS13B-209ENST00000521559 NIT2Q9NQR4 276 aa2.08□□□□□ -2.08
VPS13B-209ENST00000521559 DAZ3Q9NR90 486 aaKnown RBP2.08□□□□□ -2.08
VPS13B-209ENST00000521559 SMCO4Q9NRQ5 59 aa2.08□□□□□ -2.08
VPS13B-209ENST00000521559 MRPS16Q9Y3D3 137 aaKnown RBP2.08□□□□□ -2.08
VPS13B-209ENST00000521559 LINC00588Q9Y4M8 146 aa2.08□□□□□ -2.08
VPS13B-209ENST00000521559 URGCP-MRPS24S4R325 110 aa2.08□□□□□ -2.08
VPS13B-209ENST00000521559 ANK2Q01484 3957 aa2.08□□□□□ -2.08
VPS13B-209ENST00000521559 TRBV24-1A0A075B6N3 115 aa2.07□□□□□ -2.08
VPS13B-209ENST00000521559 TGIF2-C20orf24A0A0A6YYL0 155 aa2.07□□□□□ -2.08
VPS13B-209ENST00000521559 TRAV8-6A0A0B4J262 113 aa2.07□□□□□ -2.08
VPS13B-209ENST00000521559 TRAV26-2A0A0B4J265 109 aa2.07□□□□□ -2.08
VPS13B-209ENST00000521559 SMKR1H3BMG3 65 aa2.07□□□□□ -2.08
VPS13B-209ENST00000521559 HLA-DQA1P01909 254 aa2.07□□□□□ -2.08
VPS13B-209ENST00000521559 APCSP02743 223 aa2.07□□□□□ -2.08
VPS13B-209ENST00000521559 PMCHP20382 165 aa2.07□□□□□ -2.08
VPS13B-209ENST00000521559 S100A1P23297 94 aa2.07□□□□□ -2.08
VPS13B-209ENST00000521559 CKS2P33552 79 aa2.07□□□□□ -2.08
VPS13B-209ENST00000521559 RPL13AP40429 203 aaKnown RBP2.07□□□□□ -2.08
VPS13B-209ENST00000521559 RPS10P46783 165 aaKnown RBP2.07□□□□□ -2.08
VPS13B-209ENST00000521559 POLR2KP53803 58 aaKnown RBP2.07□□□□□ -2.08
VPS13B-209ENST00000521559 ELOBQ15370 118 aa2.07□□□□□ -2.08
VPS13B-209ENST00000521559 TMEM97Q5BJF2 176 aa2.07□□□□□ -2.08
VPS13B-209ENST00000521559 OR10J3Q5JRS4 329 aa2.07□□□□□ -2.08
VPS13B-209ENST00000521559 LELP1Q5T871 98 aa2.07□□□□□ -2.08
VPS13B-209ENST00000521559 UBE2DNLQ8IWF7 75 aa2.07□□□□□ -2.08
VPS13B-209ENST00000521559 CEND1Q8N111 149 aa2.07□□□□□ -2.08
VPS13B-209ENST00000521559 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.07□□□□□ -2.08
VPS13B-209ENST00000521559 RPL39LQ96EH5 51 aaKnown RBP2.07□□□□□ -2.08
VPS13B-209ENST00000521559 YPEL4Q96NS1 127 aa2.07□□□□□ -2.08
VPS13B-209ENST00000521559 C20orf78Q9BR46 151 aa2.07□□□□□ -2.08
VPS13B-209ENST00000521559 ST20Q9HBF5 79 aa2.07□□□□□ -2.08
VPS13B-209ENST00000521559 TRBV6-8A0A0A6YYG3 113 aa2.06□□□□□ -2.08
VPS13B-209ENST00000521559 IGHV1-24A0A0C4DH33 117 aa2.06□□□□□ -2.08
VPS13B-209ENST00000521559 TRBV27A0A0K0K1C4 114 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms