RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 RNF213Q63HN8 5207 aa1.42□□□□□ -2.18
SQLE-204ENST00000520493 LAMB1P07942 1786 aa1.42□□□□□ -2.18
SQLE-204ENST00000520493 TRPM2O94759 1503 aa1.42□□□□□ -2.18
SQLE-204ENST00000520493 PRDM15P57071 1507 aaPredicted RBP1.42□□□□□ -2.18
SQLE-204ENST00000520493 HIGD1CA8MV81 97 aa1.42□□□□□ -2.18
SQLE-204ENST00000520493 ANGP03950 147 aaKnown RBP1.42□□□□□ -2.18
SQLE-204ENST00000520493 PIRTP0C851 137 aa1.42□□□□□ -2.18
SQLE-204ENST00000520493 SLC25A6P12236 298 aa1.42□□□□□ -2.18
SQLE-204ENST00000520493 AGPAT4-IT1Q9H0P7 198 aa1.42□□□□□ -2.18
SQLE-204ENST00000520493 NDUFA12Q9UI09 145 aa1.42□□□□□ -2.18
SQLE-204ENST00000520493 FANCAO15360 1455 aa1.42□□□□□ -2.18
SQLE-204ENST00000520493 ZNF142P52746 1687 aaPredicted RBP1.42□□□□□ -2.18
SQLE-204ENST00000520493 DSPP15924 2871 aaKnown RBP1.41□□□□□ -2.18
SQLE-204ENST00000520493 ABCC1P33527 1531 aa1.41□□□□□ -2.18
SQLE-204ENST00000520493 ATP7AQ04656 1500 aa1.41□□□□□ -2.18
SQLE-204ENST00000520493 ASXL1Q8IXJ9 1541 aa1.41□□□□□ -2.18
SQLE-204ENST00000520493 TECTAO75443 2155 aa1.41□□□□□ -2.18
SQLE-204ENST00000520493 ABCA9Q8IUA7 1624 aa1.41□□□□□ -2.18
SQLE-204ENST00000520493 WNK1Q9H4A3 2382 aa1.41□□□□□ -2.18
SQLE-204ENST00000520493 MIF4GDA9UHW6 222 aaKnown RBP1.41□□□□□ -2.18
SQLE-204ENST00000520493 NDUFB6O95139 128 aa1.41□□□□□ -2.18
SQLE-204ENST00000520493 IL5P05113 134 aa1.41□□□□□ -2.18
SQLE-204ENST00000520493 LYNX1P0DP58 116 aa1.41□□□□□ -2.18
SQLE-204ENST00000520493 PIPP12273 146 aaPredicted RBP1.41□□□□□ -2.18
SQLE-204ENST00000520493 FXYD4P59646 89 aa1.41□□□□□ -2.18
SQLE-204ENST00000520493 PP6455Q8WZ26 134 aa1.41□□□□□ -2.18
SQLE-204ENST00000520493 SPTSSAQ969W0 71 aa1.41□□□□□ -2.18
SQLE-204ENST00000520493 AMELYQ99218 206 aa1.41□□□□□ -2.18
SQLE-204ENST00000520493 NAA60Q9H7X0 242 aa1.41□□□□□ -2.18
SQLE-204ENST00000520493 TMEM242Q9NWH2 141 aa1.41□□□□□ -2.18
SQLE-204ENST00000520493 MYOM2P54296 1465 aa1.41□□□□□ -2.18
SQLE-204ENST00000520493 ZNF518AQ6AHZ1 1483 aa1.41□□□□□ -2.18
SQLE-204ENST00000520493 MLH3Q9UHC1 1453 aa1.41□□□□□ -2.18
SQLE-204ENST00000520493 HIVEP1P15822 2718 aa1.41□□□□□ -2.18
SQLE-204ENST00000520493 MAP1AP78559 2803 aaPredicted RBP1.41□□□□□ -2.18
SQLE-204ENST00000520493 MED13Q9UHV7 2174 aa1.41□□□□□ -2.18
SQLE-204ENST00000520493 TRIOO75962 3097 aa1.41□□□□□ -2.18
SQLE-204ENST00000520493 ZFYVE16Q7Z3T8 1539 aa1.4□□□□□ -2.18
SQLE-204ENST00000520493 LMTK2Q8IWU2 1503 aa1.4□□□□□ -2.18
SQLE-204ENST00000520493 DEPDC5O75140 1603 aa1.4□□□□□ -2.18
SQLE-204ENST00000520493 CLTCL1P53675 1640 aa1.4□□□□□ -2.18
SQLE-204ENST00000520493 SPHKAPQ2M3C7 1700 aa1.4□□□□□ -2.18
SQLE-204ENST00000520493 RBBP6Q7Z6E9 1792 aaKnown RBP1.4□□□□□ -2.19
SQLE-204ENST00000520493 DLEC1Q9Y238 1755 aa1.4□□□□□ -2.19
SQLE-204ENST00000520493 IQGAP1P46940 1657 aa1.4□□□□□ -2.19
SQLE-204ENST00000520493 CFAP74Q9C0B2 1584 aa1.4□□□□□ -2.19
SQLE-204ENST00000520493 INO80Q9ULG1 1556 aaPredicted RBP1.4□□□□□ -2.19
SQLE-204ENST00000520493 NKTRP30414 1462 aaKnown RBP1.4□□□□□ -2.19
SQLE-204ENST00000520493 ERVK-7P63135 1459 aa1.4□□□□□ -2.19
SQLE-204ENST00000520493 NRXN1Q9ULB1 1477 aa1.4□□□□□ -2.19
SQLE-204ENST00000520493 LOC100130705A0A1B0GUX0 176 aa1.4□□□□□ -2.19
SQLE-204ENST00000520493 AKAIN1P0CW23 69 aa1.4□□□□□ -2.19
SQLE-204ENST00000520493 ARL14EPLP0DKL9 152 aa1.4□□□□□ -2.19
SQLE-204ENST00000520493 TMEM141Q96I45 108 aa1.4□□□□□ -2.19
SQLE-204ENST00000520493 SERP1Q9Y6X1 66 aa1.4□□□□□ -2.19
SQLE-204ENST00000520493 RNF17Q9BXT8 1623 aaKnown RBP1.4□□□□□ -2.19
SQLE-204ENST00000520493 MAP3K4Q9Y6R4 1608 aa1.4□□□□□ -2.19
SQLE-204ENST00000520493 A2ML1A8K2U0 1454 aa1.39□□□□□ -2.19
SQLE-204ENST00000520493 ANKRD36BQ8N2N9 1353 aa1.39□□□□□ -2.19
SQLE-204ENST00000520493 CCKP06307 115 aa1.39□□□□□ -2.19
SQLE-204ENST00000520493 HIST1H1DP16402 221 aaKnown RBP1.39□□□□□ -2.19
SQLE-204ENST00000520493 S100PP25815 95 aa1.39□□□□□ -2.19
SQLE-204ENST00000520493 IQCJQ1A5X6 159 aa1.39□□□□□ -2.19
SQLE-204ENST00000520493 XAF1Q6GPH4 301 aa1.39□□□□□ -2.19
SQLE-204ENST00000520493 SLC48A1Q6P1K1 146 aa1.39□□□□□ -2.19
SQLE-204ENST00000520493 Q6ZSA8 131 aa1.39□□□□□ -2.19
SQLE-204ENST00000520493 SEC11CQ9BY50 192 aa1.39□□□□□ -2.19
SQLE-204ENST00000520493 SCN3BQ9NY72 215 aa1.39□□□□□ -2.19
SQLE-204ENST00000520493 HMCN2Q8NDA2 5059 aa1.39□□□□□ -2.19
SQLE-204ENST00000520493 MYO3AQ8NEV4 1616 aa1.39□□□□□ -2.19
SQLE-204ENST00000520493 SLIT1O75093 1534 aa1.39□□□□□ -2.19
SQLE-204ENST00000520493 NSD3Q9BZ95 1437 aa1.39□□□□□ -2.19
SQLE-204ENST00000520493 F8P00451 2351 aa1.39□□□□□ -2.19
SQLE-204ENST00000520493 FLG2Q5D862 2391 aaPredicted RBP1.39□□□□□ -2.19
SQLE-204ENST00000520493 CSMD2Q7Z408 3487 aa1.38□□□□□ -2.19
SQLE-204ENST00000520493 IFT172Q9UG01 1749 aa1.38□□□□□ -2.19
SQLE-204ENST00000520493 TMEM131LA2VDJ0 1609 aa1.38□□□□□ -2.19
SQLE-204ENST00000520493 ABCA6Q8N139 1617 aa1.38□□□□□ -2.19
SQLE-204ENST00000520493 MROH1Q8NDA8 1641 aa1.38□□□□□ -2.19
SQLE-204ENST00000520493 USP32Q8NFA0 1604 aa1.38□□□□□ -2.19
SQLE-204ENST00000520493 TEX49A0A1B0GTD5 131 aa1.38□□□□□ -2.19
SQLE-204ENST00000520493 F6UZH7 168 aa1.38□□□□□ -2.19
SQLE-204ENST00000520493 CORTO00230 105 aa1.38□□□□□ -2.19
SQLE-204ENST00000520493 NCR3O14931 201 aa1.38□□□□□ -2.19
SQLE-204ENST00000520493 S100A1P23297 94 aa1.38□□□□□ -2.19
SQLE-204ENST00000520493 MRPS10P82664 201 aaKnown RBP1.38□□□□□ -2.19
SQLE-204ENST00000520493 C12orf73Q69YU5 71 aa1.38□□□□□ -2.19
SQLE-204ENST00000520493 Q6AWC8 147 aa1.38□□□□□ -2.19
SQLE-204ENST00000520493 LINC00575Q6W349 94 aa1.38□□□□□ -2.19
SQLE-204ENST00000520493 GNG8Q9UK08 70 aa1.38□□□□□ -2.19
SQLE-204ENST00000520493 ABCC3O15438 1527 aa1.38□□□□□ -2.19
SQLE-204ENST00000520493 PPLO60437 1756 aa1.38□□□□□ -2.19
SQLE-204ENST00000520493 KMT2DO14686 5537 aa1.38□□□□□ -2.19
SQLE-204ENST00000520493 DLG5Q8TDM6 1919 aa1.38□□□□□ -2.19
SQLE-204ENST00000520493 GLI2P10070 1586 aa1.38□□□□□ -2.19
SQLE-204ENST00000520493 UGGT1Q9NYU2 1555 aa1.38□□□□□ -2.19
SQLE-204ENST00000520493 SPAG17Q6Q759 2223 aa1.38□□□□□ -2.19
SQLE-204ENST00000520493 SNRNP200O75643 2136 aaKnown RBP1.37□□□□□ -2.19
SQLE-204ENST00000520493 PIK3C2BO00750 1634 aa1.37□□□□□ -2.19
SQLE-204ENST00000520493 AGLP35573 1532 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms