RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 TMSB15BA0A087X1C1 80 aa6.3□□□□□ -1.4
HDAC3-215ENST00000519474 TRAV1-1A0A0B4J248 108 aa6.3□□□□□ -1.4
HDAC3-215ENST00000519474 IGHV3-38A0A0C4DH36 116 aa6.3□□□□□ -1.4
HDAC3-215ENST00000519474 H3BRM9 83 aa6.3□□□□□ -1.4
HDAC3-215ENST00000519474 H3BVH4 76 aa6.3□□□□□ -1.4
HDAC3-215ENST00000519474 NTF3P20783 257 aa6.3□□□□□ -1.4
HDAC3-215ENST00000519474 RHOHQ15669 191 aa6.3□□□□□ -1.4
HDAC3-215ENST00000519474 SPATA45Q537H7 98 aa6.3□□□□□ -1.4
HDAC3-215ENST00000519474 FAM19A1Q7Z5A9 133 aa6.3□□□□□ -1.4
HDAC3-215ENST00000519474 BAGE2Q86Y30 109 aa6.3□□□□□ -1.4
HDAC3-215ENST00000519474 C14orf178Q8N769 122 aaPredicted RBP6.3□□□□□ -1.4
HDAC3-215ENST00000519474 BORCS7Q96B45 105 aa6.3□□□□□ -1.4
HDAC3-215ENST00000519474 AP1S3Q96PC3 154 aa6.3□□□□□ -1.4
HDAC3-215ENST00000519474 TMEM70Q9BUB7 260 aa6.3□□□□□ -1.4
HDAC3-215ENST00000519474 KRTAP4-5Q9BYR2 181 aa6.3□□□□□ -1.4
HDAC3-215ENST00000519474 MSRB1Q9NZV6 116 aa6.3□□□□□ -1.4
HDAC3-215ENST00000519474 HERC2O95714 4834 aa6.3□□□□□ -1.4
HDAC3-215ENST00000519474 DYNC1H1Q14204 4646 aaKnown RBP6.29□□□□□ -1.4
HDAC3-215ENST00000519474 C9orf118A6NHY6 69 aa6.29□□□□□ -1.4
HDAC3-215ENST00000519474 IBA57-AS1B1ANH7 110 aa6.29□□□□□ -1.4
HDAC3-215ENST00000519474 TMEM250H0YL14 139 aa6.29□□□□□ -1.4
HDAC3-215ENST00000519474 FUSP35637 526 aaKnown RBP eCLIP6.29□□□□□ -1.4
HDAC3-215ENST00000519474 GAGE13Q4V321 117 aa6.29□□□□□ -1.4
HDAC3-215ENST00000519474 LELP1Q5T871 98 aa6.29□□□□□ -1.4
HDAC3-215ENST00000519474 NFE4Q86UQ8 179 aa6.29□□□□□ -1.4
HDAC3-215ENST00000519474 PAM16Q9Y3D7 125 aa6.29□□□□□ -1.4
HDAC3-215ENST00000519474 DNAH11Q96DT5 4516 aa6.28□□□□□ -1.4
HDAC3-215ENST00000519474 TRAV8-6A0A0B4J262 113 aa6.28□□□□□ -1.4
HDAC3-215ENST00000519474 TMEM262E9PQX1 116 aa6.28□□□□□ -1.4
HDAC3-215ENST00000519474 CDK2AP2O75956 126 aa6.28□□□□□ -1.4
HDAC3-215ENST00000519474 LINC00694P0DN24 101 aa6.28□□□□□ -1.4
HDAC3-215ENST00000519474 NDUFV3P56181 108 aaKnown RBP6.28□□□□□ -1.4
HDAC3-215ENST00000519474 LINC01556Q5JQF7 62 aa6.28□□□□□ -1.4
HDAC3-215ENST00000519474 MEIG1Q5JSS6 88 aa6.28□□□□□ -1.4
HDAC3-215ENST00000519474 PLEKHB2Q96CS7 222 aa6.28□□□□□ -1.4
HDAC3-215ENST00000519474 TM2D2Q9BX73 214 aa6.28□□□□□ -1.4
HDAC3-215ENST00000519474 PHLDA3Q9Y5J5 127 aa6.28□□□□□ -1.4
HDAC3-215ENST00000519474 A0A087WTM6 91 aa6.27□□□□□ -1.41
HDAC3-215ENST00000519474 M0R381 172 aa6.27□□□□□ -1.41
HDAC3-215ENST00000519474 IGLV2-8P01709 118 aa6.27□□□□□ -1.41
HDAC3-215ENST00000519474 GCSHP23434 173 aa6.27□□□□□ -1.41
HDAC3-215ENST00000519474 RPL13AP40429 203 aaKnown RBP6.27□□□□□ -1.41
HDAC3-215ENST00000519474 Q0VG73 95 aa6.27□□□□□ -1.41
HDAC3-215ENST00000519474 RASL11AQ6T310 242 aa6.27□□□□□ -1.41
HDAC3-215ENST00000519474 PMCHL2Q9BQD1 86 aa6.27□□□□□ -1.41
HDAC3-215ENST00000519474 GNG13Q9P2W3 67 aa6.27□□□□□ -1.41
HDAC3-215ENST00000519474 HECTD4Q9Y4D8 3996 aa6.27□□□□□ -1.41
HDAC3-215ENST00000519474 C9JQL5 133 aa6.26□□□□□ -1.41
HDAC3-215ENST00000519474 IGHV3-30P01768 117 aa6.26□□□□□ -1.41
HDAC3-215ENST00000519474 IGHV3-33P01772 117 aa6.26□□□□□ -1.41
HDAC3-215ENST00000519474 IGHV3-30-3P0DP02 117 aa6.26□□□□□ -1.41
HDAC3-215ENST00000519474 IGHV3-30-5P0DP03 117 aa6.26□□□□□ -1.41
HDAC3-215ENST00000519474 IFITM1P13164 125 aa6.26□□□□□ -1.41
HDAC3-215ENST00000519474 FOXI1Q12951 378 aa6.26□□□□□ -1.41
HDAC3-215ENST00000519474 BVES-AS1Q5T3Y7 98 aa6.26□□□□□ -1.41
HDAC3-215ENST00000519474 Q6ZUT4 128 aa6.26□□□□□ -1.41
HDAC3-215ENST00000519474 C10orf126Q8N4M7 172 aa6.26□□□□□ -1.41
HDAC3-215ENST00000519474 C11orf52Q96A22 123 aa6.26□□□□□ -1.41
HDAC3-215ENST00000519474 MUC21A0A0G2JKD1 596 aa6.25□□□□□ -1.41
HDAC3-215ENST00000519474 MUC21A0A140T8X8 626 aa6.25□□□□□ -1.41
HDAC3-215ENST00000519474 LRCOL1A6NCL2 159 aa6.25□□□□□ -1.41
HDAC3-215ENST00000519474 ATP5LO75964 103 aa6.25□□□□□ -1.41
HDAC3-215ENST00000519474 FAM74A4Q5TZK3 123 aa6.25□□□□□ -1.41
HDAC3-215ENST00000519474 Q8N3U1 123 aa6.25□□□□□ -1.41
HDAC3-215ENST00000519474 OR10AG1Q8NH19 301 aa6.25□□□□□ -1.41
HDAC3-215ENST00000519474 MANBALQ9NQG1 85 aa6.25□□□□□ -1.41
HDAC3-215ENST00000519474 C19orf71A6NCJ1 209 aa6.24□□□□□ -1.41
HDAC3-215ENST00000519474 CCDC179H3BU77 68 aa6.24□□□□□ -1.41
HDAC3-215ENST00000519474 NCR2O95944 276 aa6.24□□□□□ -1.41
HDAC3-215ENST00000519474 OR5AL1P0C617 328 aa6.24□□□□□ -1.41
HDAC3-215ENST00000519474 FAM231DQ6ZW35 169 aa6.24□□□□□ -1.41
HDAC3-215ENST00000519474 DAZ4Q86SG3 579 aaKnown RBP6.24□□□□□ -1.41
HDAC3-215ENST00000519474 TMEM191AQ9H0A3 160 aa6.24□□□□□ -1.41
HDAC3-215ENST00000519474 DAZ3Q9NR90 486 aaKnown RBP6.24□□□□□ -1.41
HDAC3-215ENST00000519474 KIF25-AS1Q9Y6Z4 181 aa6.24□□□□□ -1.41
HDAC3-215ENST00000519474 RBFOX3A6NFN3 312 aa6.23□□□□□ -1.41
HDAC3-215ENST00000519474 KRTAP10-1P60331 282 aa6.23□□□□□ -1.41
HDAC3-215ENST00000519474 Q6ZVH6 145 aa6.23□□□□□ -1.41
HDAC3-215ENST00000519474 KIR2DL4Q99706 377 aa6.23□□□□□ -1.41
HDAC3-215ENST00000519474 PKHD1P08F94 4074 aa6.23□□□□□ -1.41
HDAC3-215ENST00000519474 TRBV20OR9-2A0A075B6H5 130 aa6.22□□□□□ -1.41
HDAC3-215ENST00000519474 TRBV7-3A0A075B6L6 115 aa6.22□□□□□ -1.41
HDAC3-215ENST00000519474 TRBV10-1A0A0K0K1A3 114 aa6.22□□□□□ -1.41
HDAC3-215ENST00000519474 FAM231BA6NCW3 169 aa6.22□□□□□ -1.41
HDAC3-215ENST00000519474 UBE2D3P61077 147 aa6.22□□□□□ -1.41
HDAC3-215ENST00000519474 UBE2D2P62837 147 aa6.22□□□□□ -1.41
HDAC3-215ENST00000519474 RPL36AP83881 106 aaKnown RBP6.22□□□□□ -1.41
HDAC3-215ENST00000519474 CENPWQ5EE01 88 aa6.22□□□□□ -1.41
HDAC3-215ENST00000519474 SERTAD4-AS1Q5TG53 156 aa6.22□□□□□ -1.41
HDAC3-215ENST00000519474 Q8N1X5 172 aa6.22□□□□□ -1.41
HDAC3-215ENST00000519474 MAPKAPK5-AS1Q8N8E1 139 aa6.22□□□□□ -1.41
HDAC3-215ENST00000519474 OR10G8Q8NGN5 311 aa6.22□□□□□ -1.41
HDAC3-215ENST00000519474 RPL36ALQ969Q0 106 aaKnown RBP6.22□□□□□ -1.41
HDAC3-215ENST00000519474 CDIP1Q9H305 208 aa6.22□□□□□ -1.41
HDAC3-215ENST00000519474 Q9HAA7 133 aa6.22□□□□□ -1.41
HDAC3-215ENST00000519474 NDUFC2O95298 119 aa6.21□□□□□ -1.42
HDAC3-215ENST00000519474 IGLC6P0CF74 106 aa6.21□□□□□ -1.42
HDAC3-215ENST00000519474 FABP2P12104 132 aa6.21□□□□□ -1.42
HDAC3-215ENST00000519474 GAGE2BQ13066 116 aa6.21□□□□□ -1.42
HDAC3-215ENST00000519474 GAGE2EQ4V326 116 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms