RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 PCSK5Q92824 1860 aa6.24□□□□□ -1.41
PCM1-212ENST00000519253 FAM19A4Q96LR4 140 aa6.24□□□□□ -1.41
PCM1-212ENST00000519253 RNF223E7ERA6 249 aa6.23□□□□□ -1.41
PCM1-212ENST00000519253 ZNF580Q9UK33 172 aa6.23□□□□□ -1.41
PCM1-212ENST00000519253 RAI1Q7Z5J4 1906 aaPredicted RBP6.23□□□□□ -1.41
PCM1-212ENST00000519253 CHD9Q3L8U1 2897 aa6.23□□□□□ -1.41
PCM1-212ENST00000519253 SORL1Q92673 2214 aa6.23□□□□□ -1.41
PCM1-212ENST00000519253 USP17L23D6RBM5 183 aa6.23□□□□□ -1.41
PCM1-212ENST00000519253 PDE6GP18545 87 aa6.23□□□□□ -1.41
PCM1-212ENST00000519253 Q6JHZ5 121 aa6.23□□□□□ -1.41
PCM1-212ENST00000519253 LINC00242Q5T6M2 205 aa6.22□□□□□ -1.41
PCM1-212ENST00000519253 HTN3P15516 51 aa6.22□□□□□ -1.41
PCM1-212ENST00000519253 CHCHD7Q9BUK0 85 aa6.22□□□□□ -1.41
PCM1-212ENST00000519253 LINC00694P0DN24 101 aa6.22□□□□□ -1.41
PCM1-212ENST00000519253 Q6ZSV7 163 aa6.22□□□□□ -1.41
PCM1-212ENST00000519253 NACAE9PAV3 2078 aa6.21□□□□□ -1.41
PCM1-212ENST00000519253 RBM3P98179 157 aaKnown RBP6.21□□□□□ -1.41
PCM1-212ENST00000519253 FAM208BQ5VWN6 2430 aa6.21□□□□□ -1.41
PCM1-212ENST00000519253 NDUFC2O95298 119 aa6.21□□□□□ -1.42
PCM1-212ENST00000519253 RPL28P46779 137 aaKnown RBP6.21□□□□□ -1.42
PCM1-212ENST00000519253 ATRXP46100 2492 aa6.21□□□□□ -1.42
PCM1-212ENST00000519253 LAMA3Q16787 3333 aa6.21□□□□□ -1.42
PCM1-212ENST00000519253 MAPK1IP1LQ8NDC0 245 aa6.21□□□□□ -1.42
PCM1-212ENST00000519253 C4orf3Q8WVX3 66 aa6.21□□□□□ -1.42
PCM1-212ENST00000519253 PRRC2CQ9Y520 2896 aaKnown RBP6.2□□□□□ -1.42
PCM1-212ENST00000519253 SMIM1B2RUZ4 78 aa6.2□□□□□ -1.42
PCM1-212ENST00000519253 FHL3Q13643 280 aa6.2□□□□□ -1.42
PCM1-212ENST00000519253 Q6ZTI0 123 aa6.2□□□□□ -1.42
PCM1-212ENST00000519253 MUC6Q6W4X9 2439 aa6.2□□□□□ -1.42
PCM1-212ENST00000519253 CACNA1AO00555 2505 aa6.2□□□□□ -1.42
PCM1-212ENST00000519253 MYO9AB2RTY4 2548 aa6.2□□□□□ -1.42
PCM1-212ENST00000519253 RANBP2P49792 3224 aaKnown RBP6.2□□□□□ -1.42
PCM1-212ENST00000519253 ANGP03950 147 aaKnown RBP6.2□□□□□ -1.42
PCM1-212ENST00000519253 CCL24O00175 119 aa6.19□□□□□ -1.42
PCM1-212ENST00000519253 BRCA2P51587 3418 aa6.19□□□□□ -1.42
PCM1-212ENST00000519253 PTPRBP23467 1997 aa6.19□□□□□ -1.42
PCM1-212ENST00000519253 C20orf197Q8N268 126 aa6.19□□□□□ -1.42
PCM1-212ENST00000519253 CSDC2Q9Y534 153 aaKnown RBP6.19□□□□□ -1.42
PCM1-212ENST00000519253 TRAV23DV6A0A075B6W5 121 aa6.19□□□□□ -1.42
PCM1-212ENST00000519253 NCR3O14931 201 aa6.19□□□□□ -1.42
PCM1-212ENST00000519253 DEFB114Q30KQ6 69 aa6.19□□□□□ -1.42
PCM1-212ENST00000519253 CDC42SE2Q9NRR3 84 aa6.19□□□□□ -1.42
PCM1-212ENST00000519253 MKI67P46013 3256 aaKnown RBP6.19□□□□□ -1.42
PCM1-212ENST00000519253 SMIM11BQ8TCY0 68 aa6.18□□□□□ -1.42
PCM1-212ENST00000519253 UPK3BQ9BT76 320 aa6.18□□□□□ -1.42
PCM1-212ENST00000519253 CLPSL2Q6UWE3 100 aa6.18□□□□□ -1.42
PCM1-212ENST00000519253 TRBV6-4A0A1B0GX49 114 aa6.18□□□□□ -1.42
PCM1-212ENST00000519253 GYPEP15421 78 aa6.18□□□□□ -1.42
PCM1-212ENST00000519253 FAM236DA0A1B0GTK5 79 aa6.18□□□□□ -1.42
PCM1-212ENST00000519253 FAM236CP0DP71 79 aa6.18□□□□□ -1.42
PCM1-212ENST00000519253 C10orf99Q6UWK7 81 aa6.17□□□□□ -1.42
PCM1-212ENST00000519253 DEFB121Q5J5C9 76 aa6.17□□□□□ -1.42
PCM1-212ENST00000519253 SHISA2Q6UWI4 295 aa6.17□□□□□ -1.42
PCM1-212ENST00000519253 CEP295Q9C0D2 2601 aa6.17□□□□□ -1.42
PCM1-212ENST00000519253 SMIM9A6NGZ8 99 aa6.17□□□□□ -1.42
PCM1-212ENST00000519253 ZNF561-AS1K7EIQ3 104 aa6.17□□□□□ -1.42
PCM1-212ENST00000519253 IGLV5-39A0A0G2JS06 123 aa6.17□□□□□ -1.42
PCM1-212ENST00000519253 SLPIP03973 132 aa6.17□□□□□ -1.42
PCM1-212ENST00000519253 NHLRC4P0CG21 123 aaPredicted RBP6.17□□□□□ -1.42
PCM1-212ENST00000519253 IGF2RP11717 2491 aa6.16□□□□□ -1.42
PCM1-212ENST00000519253 EDN2P20800 178 aa6.16□□□□□ -1.42
PCM1-212ENST00000519253 CCL18P55774 89 aa6.16□□□□□ -1.42
PCM1-212ENST00000519253 DAD1P61803 113 aa6.16□□□□□ -1.42
PCM1-212ENST00000519253 CDSNQ15517 529 aa6.16□□□□□ -1.42
PCM1-212ENST00000519253 BEAN1Q3B7T3 259 aa6.16□□□□□ -1.42
PCM1-212ENST00000519253 ENHOQ6UWT2 76 aa6.16□□□□□ -1.42
PCM1-212ENST00000519253 NRGNQ92686 78 aa6.16□□□□□ -1.42
PCM1-212ENST00000519253 CUL9Q8IWT3 2517 aa6.16□□□□□ -1.42
PCM1-212ENST00000519253 TRBV6-8A0A0A6YYG3 113 aa6.16□□□□□ -1.42
PCM1-212ENST00000519253 COX6A2Q02221 97 aa6.15□□□□□ -1.42
PCM1-212ENST00000519253 IGLV5-45A0A087WSX0 123 aa6.15□□□□□ -1.42
PCM1-212ENST00000519253 Q6YL49 198 aa6.15□□□□□ -1.43
PCM1-212ENST00000519253 LITAFQ99732 161 aa6.15□□□□□ -1.43
PCM1-212ENST00000519253 A0A096LPF7 62 aa6.15□□□□□ -1.43
PCM1-212ENST00000519253 C19orf84I3L1E1 186 aa6.14□□□□□ -1.43
PCM1-212ENST00000519253 CRYGAP11844 174 aa6.14□□□□□ -1.43
PCM1-212ENST00000519253 F5H768 121 aa6.14□□□□□ -1.43
PCM1-212ENST00000519253 CITED2Q99967 270 aaPredicted RBP6.14□□□□□ -1.43
PCM1-212ENST00000519253 C5orf42Q9H799 3197 aa6.14□□□□□ -1.43
PCM1-212ENST00000519253 PRRC2AP48634 2157 aaKnown RBP6.14□□□□□ -1.43
PCM1-212ENST00000519253 CCKP06307 115 aa6.14□□□□□ -1.43
PCM1-212ENST00000519253 FAM19A5Q7Z5A7 132 aaPredicted RBP6.14□□□□□ -1.43
PCM1-212ENST00000519253 C1orf43Q9BWL3 253 aa6.14□□□□□ -1.43
PCM1-212ENST00000519253 PPDPFQ9H3Y8 114 aa6.14□□□□□ -1.43
PCM1-212ENST00000519253 KLK5Q9Y337 293 aaPredicted RBP6.14□□□□□ -1.43
PCM1-212ENST00000519253 PRM2P04554 102 aa6.14□□□□□ -1.43
PCM1-212ENST00000519253 A0A1W2PPR1 153 aa6.13□□□□□ -1.43
PCM1-212ENST00000519253 NDUFC2-KCTD14E9PQ53 114 aa6.13□□□□□ -1.43
PCM1-212ENST00000519253 ZNF575Q86XF7 245 aa6.13□□□□□ -1.43
PCM1-212ENST00000519253 DIRC1Q969H9 104 aa6.13□□□□□ -1.43
PCM1-212ENST00000519253 PRO0255Q9UI72 69 aa6.13□□□□□ -1.43
PCM1-212ENST00000519253 NAV2Q8IVL1 2488 aa6.13□□□□□ -1.43
PCM1-212ENST00000519253 IGLV10-54A0A075B6I4 117 aa6.13□□□□□ -1.43
PCM1-212ENST00000519253 RPS28P62857 69 aaKnown RBP6.13□□□□□ -1.43
PCM1-212ENST00000519253 TRANK1O15050 2925 aa6.13□□□□□ -1.43
PCM1-212ENST00000519253 SPAG11BQ08648 103 aa6.13□□□□□ -1.43
PCM1-212ENST00000519253 Q6ZSN1 163 aa6.12□□□□□ -1.43
PCM1-212ENST00000519253 Q96MF0 132 aa6.12□□□□□ -1.43
PCM1-212ENST00000519253 ZNF702PQ9H963 129 aa6.12□□□□□ -1.43
PCM1-212ENST00000519253 NDUFC1O43677 76 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms