RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 UBE2WQ96B02 151 aa11.92□□□□□ -0.5
PCDHGA11-202ENST00000518882 PEMTQ9UBM1 199 aa11.92□□□□□ -0.5
PCDHGA11-202ENST00000518882 IGHV3OR16-12A0A075B7B8 117 aa11.91□□□□□ -0.5
PCDHGA11-202ENST00000518882 TRAV4A0A0B4J268 109 aa11.91□□□□□ -0.5
PCDHGA11-202ENST00000518882 KHDC1LQ5JSQ8 128 aa11.91□□□□□ -0.5
PCDHGA11-202ENST00000518882 NDUFA1O15239 70 aa11.91□□□□□ -0.5
PCDHGA11-202ENST00000518882 TIMM17BO60830 172 aa11.91□□□□□ -0.5
PCDHGA11-202ENST00000518882 INSP01308 110 aa11.91□□□□□ -0.5
PCDHGA11-202ENST00000518882 TIRAPP58753 221 aa11.91□□□□□ -0.5
PCDHGA11-202ENST00000518882 TEX29Q8N6K0 151 aa11.91□□□□□ -0.5
PCDHGA11-202ENST00000518882 DYNLRB2Q8TF09 96 aa11.91□□□□□ -0.5
PCDHGA11-202ENST00000518882 XCL2Q9UBD3 114 aa11.91□□□□□ -0.5
PCDHGA11-202ENST00000518882 NDUFA7O95182 113 aa11.9□□□□□ -0.5
PCDHGA11-202ENST00000518882 LINC00694P0DN24 101 aa11.9□□□□□ -0.5
PCDHGA11-202ENST00000518882 DEFB114Q30KQ6 69 aa11.9□□□□□ -0.5
PCDHGA11-202ENST00000518882 YAE1D1Q9NRH1 226 aa11.9□□□□□ -0.5
PCDHGA11-202ENST00000518882 TLN2Q9Y4G6 2542 aa11.9□□□□□ -0.5
PCDHGA11-202ENST00000518882 EPG5Q9HCE0 2579 aa11.9□□□□□ -0.5
PCDHGA11-202ENST00000518882 COX6CP09669 75 aa11.9□□□□□ -0.5
PCDHGA11-202ENST00000518882 C4orf3Q8WVX3 66 aa11.9□□□□□ -0.5
PCDHGA11-202ENST00000518882 CITED2Q99967 270 aaPredicted RBP11.9□□□□□ -0.5
PCDHGA11-202ENST00000518882 LST1O00453 97 aa11.89□□□□□ -0.51
PCDHGA11-202ENST00000518882 Q8N2B8 174 aa11.89□□□□□ -0.51
PCDHGA11-202ENST00000518882 TRAV8-4A0A0B4J246 113 aa11.89□□□□□ -0.51
PCDHGA11-202ENST00000518882 IFITM1P13164 125 aa11.89□□□□□ -0.51
PCDHGA11-202ENST00000518882 LINC00242Q5T6M2 205 aa11.89□□□□□ -0.51
PCDHGA11-202ENST00000518882 DGAT2L7PQ6IED9 249 aa11.89□□□□□ -0.51
PCDHGA11-202ENST00000518882 ZNF625Q96I27 306 aaPredicted RBP11.89□□□□□ -0.51
PCDHGA11-202ENST00000518882 ANAPC13Q9BS18 74 aa11.89□□□□□ -0.51
PCDHGA11-202ENST00000518882 NF1P21359 2839 aa11.88□□□□□ -0.51
PCDHGA11-202ENST00000518882 ZFYVE26Q68DK2 2539 aa11.88□□□□□ -0.51
PCDHGA11-202ENST00000518882 SNCGO76070 127 aa11.88□□□□□ -0.51
PCDHGA11-202ENST00000518882 IGLV5-39A0A0G2JS06 123 aa11.88□□□□□ -0.51
PCDHGA11-202ENST00000518882 A0A0U1RRA0 63 aa11.88□□□□□ -0.51
PCDHGA11-202ENST00000518882 ODF3L2Q3SX64 289 aa11.88□□□□□ -0.51
PCDHGA11-202ENST00000518882 Q9H8V8 135 aa11.88□□□□□ -0.51
PCDHGA11-202ENST00000518882 H3BT86 120 aa11.87□□□□□ -0.51
PCDHGA11-202ENST00000518882 NAV2Q8IVL1 2488 aa11.87□□□□□ -0.51
PCDHGA11-202ENST00000518882 NIPBLQ6KC79 2804 aaeCLIP11.87□□□□□ -0.51
PCDHGA11-202ENST00000518882 NOTCH3Q9UM47 2321 aa11.87□□□□□ -0.51
PCDHGA11-202ENST00000518882 NHLRC4P0CG21 123 aaPredicted RBP11.86□□□□□ -0.51
PCDHGA11-202ENST00000518882 C1orf158Q8N1D5 194 aa11.86□□□□□ -0.51
PCDHGA11-202ENST00000518882 LINC00308Q8TCZ7 52 aa11.86□□□□□ -0.51
PCDHGA11-202ENST00000518882 NTM-AS1Q6ZSK4 140 aa11.86□□□□□ -0.51
PCDHGA11-202ENST00000518882 C2CD3Q4AC94 2353 aa11.85□□□□□ -0.51
PCDHGA11-202ENST00000518882 TRGV1A0A0A0MS02 117 aa11.85□□□□□ -0.51
PCDHGA11-202ENST00000518882 GAGE2BQ13066 116 aa11.85□□□□□ -0.51
PCDHGA11-202ENST00000518882 GAGE2EQ4V326 116 aa11.85□□□□□ -0.51
PCDHGA11-202ENST00000518882 IL17DQ8TAD2 202 aa11.85□□□□□ -0.51
PCDHGA11-202ENST00000518882 GAGE2DQ9UEU5 116 aa11.85□□□□□ -0.51
PCDHGA11-202ENST00000518882 ZNF462Q96JM2 2506 aa11.85□□□□□ -0.51
PCDHGA11-202ENST00000518882 SMIM1B2RUZ4 78 aa11.85□□□□□ -0.51
PCDHGA11-202ENST00000518882 KRTAP10-9P60411 292 aa11.85□□□□□ -0.51
PCDHGA11-202ENST00000518882 HERVK_113P63121 156 aa11.85□□□□□ -0.51
PCDHGA11-202ENST00000518882 SOSTDC1Q6X4U4 206 aa11.85□□□□□ -0.51
PCDHGA11-202ENST00000518882 C15orf53Q8NAA6 179 aa11.84□□□□□ -0.51
PCDHGA11-202ENST00000518882 TRAV13-1A0A0B4J241 112 aa11.84□□□□□ -0.51
PCDHGA11-202ENST00000518882 CIRBPQ14011 172 aaKnown RBP11.84□□□□□ -0.51
PCDHGA11-202ENST00000518882 SETXQ7Z333 2677 aaKnown RBP11.84□□□□□ -0.51
PCDHGA11-202ENST00000518882 Q6ZTI0 123 aa11.83□□□□□ -0.52
PCDHGA11-202ENST00000518882 SONP18583 2426 aaKnown RBP11.83□□□□□ -0.52
PCDHGA11-202ENST00000518882 JMJD1CQ15652 2540 aa11.83□□□□□ -0.52
PCDHGA11-202ENST00000518882 FAM19A3Q7Z5A8 133 aa11.82□□□□□ -0.52
PCDHGA11-202ENST00000518882 STHQ8IWL8 128 aa11.82□□□□□ -0.52
PCDHGA11-202ENST00000518882 NDUFV3P56181 108 aaKnown RBP11.81□□□□□ -0.52
PCDHGA11-202ENST00000518882 NBPF19A0A087WUL8 3843 aa11.81□□□□□ -0.52
PCDHGA11-202ENST00000518882 K7EQD1 137 aa11.81□□□□□ -0.52
PCDHGA11-202ENST00000518882 TTC32Q5I0X7 151 aa11.81□□□□□ -0.52
PCDHGA11-202ENST00000518882 UBR5O95071 2799 aaPredicted RBP11.8□□□□□ -0.52
PCDHGA11-202ENST00000518882 PRB1P04280 392 aa11.8□□□□□ -0.52
PCDHGA11-202ENST00000518882 RPL36AP83881 106 aaKnown RBP11.8□□□□□ -0.52
PCDHGA11-202ENST00000518882 DEFB121Q5J5C9 76 aa11.8□□□□□ -0.52
PCDHGA11-202ENST00000518882 C11orf44Q8N8P7 122 aa11.8□□□□□ -0.52
PCDHGA11-202ENST00000518882 RPL36ALQ969Q0 106 aaKnown RBP11.8□□□□□ -0.52
PCDHGA11-202ENST00000518882 F5H768 121 aa11.8□□□□□ -0.52
PCDHGA11-202ENST00000518882 CSDC2Q9Y534 153 aaKnown RBP11.8□□□□□ -0.52
PCDHGA11-202ENST00000518882 CDC42SE2Q9NRR3 84 aa11.79□□□□□ -0.52
PCDHGA11-202ENST00000518882 SETD2Q9BYW2 2564 aaPredicted RBP11.79□□□□□ -0.52
PCDHGA11-202ENST00000518882 GAGE12JA6NER3 117 aa11.79□□□□□ -0.52
PCDHGA11-202ENST00000518882 GAGE4Q13068 117 aa11.79□□□□□ -0.52
PCDHGA11-202ENST00000518882 GAGE5Q13069 117 aa11.79□□□□□ -0.52
PCDHGA11-202ENST00000518882 Q6Q795 121 aa11.79□□□□□ -0.52
PCDHGA11-202ENST00000518882 PRIMA1Q86XR5 153 aa11.79□□□□□ -0.52
PCDHGA11-202ENST00000518882 A0A1W2PRX2 142 aa11.78□□□□□ -0.52
PCDHGA11-202ENST00000518882 Q96MF0 132 aa11.78□□□□□ -0.52
PCDHGA11-202ENST00000518882 TRBV10-1A0A0K0K1A3 114 aa11.77□□□□□ -0.52
PCDHGA11-202ENST00000518882 COX7A2LO14548 114 aa11.77□□□□□ -0.52
PCDHGA11-202ENST00000518882 DAZ2Q13117 558 aaKnown RBP11.77□□□□□ -0.52
PCDHGA11-202ENST00000518882 SHISA2Q6UWI4 295 aa11.77□□□□□ -0.52
PCDHGA11-202ENST00000518882 DAZ4Q86SG3 579 aaKnown RBP11.77□□□□□ -0.52
PCDHGA11-202ENST00000518882 DAZ3Q9NR90 486 aaKnown RBP11.77□□□□□ -0.52
PCDHGA11-202ENST00000518882 ITPR3Q14573 2671 aa11.77□□□□□ -0.53
PCDHGA11-202ENST00000518882 MEIG1Q5JSS6 88 aa11.77□□□□□ -0.53
PCDHGA11-202ENST00000518882 FAM240AA0A1B0GVK7 77 aa11.76□□□□□ -0.53
PCDHGA11-202ENST00000518882 APCP25054 2843 aa11.76□□□□□ -0.53
PCDHGA11-202ENST00000518882 USP24Q9UPU5 2620 aa11.76□□□□□ -0.53
PCDHGA11-202ENST00000518882 GAGE6Q13070 117 aa11.76□□□□□ -0.53
PCDHGA11-202ENST00000518882 NOP10Q9NPE3 64 aaKnown RBP11.76□□□□□ -0.53
PCDHGA11-202ENST00000518882 DEFB113Q30KQ7 82 aa11.75□□□□□ -0.53
PCDHGA11-202ENST00000518882 TRAV25A0A0B4J276 109 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms