RNA–Protein interactions for RNA: ENST00000514951.5

SMN1-209, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 2 BASIC

Gene SMN1, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-209ENST00000514951 TMEM18Q96B42 140 aa12.73□□□□□ -0.37
SMN1-209ENST00000514951 RMI2Q96E14 147 aa12.73□□□□□ -0.37
SMN1-209ENST00000514951 TIMM21Q9BVV7 248 aa12.73□□□□□ -0.37
SMN1-209ENST00000514951 CDC42SE2Q9NRR3 84 aa12.73□□□□□ -0.37
SMN1-209ENST00000514951 CSDC2Q9Y534 153 aaKnown RBP12.73□□□□□ -0.37
SMN1-209ENST00000514951 ORMDL2Q53FV1 153 aa12.72□□□□□ -0.37
SMN1-209ENST00000514951 MAPKAPK5-AS1Q8N8E1 139 aa12.72□□□□□ -0.37
SMN1-209ENST00000514951 PRSS3P2Q8NHM4 247 aa12.72□□□□□ -0.37
SMN1-209ENST00000514951 C18orf32Q8TCD1 76 aa12.72□□□□□ -0.37
SMN1-209ENST00000514951 LINC01546A6NGU7 62 aa12.71□□□□□ -0.37
SMN1-209ENST00000514951 PSCAO43653 123 aa12.71□□□□□ -0.37
SMN1-209ENST00000514951 FAM104AQ969W3 186 aa12.71□□□□□ -0.37
SMN1-209ENST00000514951 C1orf43Q9BWL3 253 aa12.71□□□□□ -0.37
SMN1-209ENST00000514951 DNAH5Q8TE73 4624 aa12.7□□□□□ -0.38
SMN1-209ENST00000514951 SMAGPQ0VAQ4 97 aa12.7□□□□□ -0.38
SMN1-209ENST00000514951 DGAT2L7PQ6IED9 249 aa12.7□□□□□ -0.38
SMN1-209ENST00000514951 KRTAP26-1Q6PEX3 210 aa12.7□□□□□ -0.38
SMN1-209ENST00000514951 ZNF664Q8N3J9 261 aa12.7□□□□□ -0.38
SMN1-209ENST00000514951 COX11Q9Y6N1 276 aa12.7□□□□□ -0.38
SMN1-209ENST00000514951 IGLV10-54A0A075B6I4 117 aa12.69□□□□□ -0.38
SMN1-209ENST00000514951 A0A087WTM6 91 aa12.69□□□□□ -0.38
SMN1-209ENST00000514951 IGKV3OR2-268A0A0C4DH90 116 aa12.69□□□□□ -0.38
SMN1-209ENST00000514951 LRCOL1A6NCL2 159 aa12.69□□□□□ -0.38
SMN1-209ENST00000514951 TRGC2P03986 189 aa12.69□□□□□ -0.38
SMN1-209ENST00000514951 S100A1P23297 94 aa12.69□□□□□ -0.38
SMN1-209ENST00000514951 Q6ZUT4 128 aa12.69□□□□□ -0.38
SMN1-209ENST00000514951 KRTAP17-1Q9BYP8 105 aa12.69□□□□□ -0.38
SMN1-209ENST00000514951 SPANXA1Q9NS26 97 aa12.69□□□□□ -0.38
SMN1-209ENST00000514951 TRAV8-4A0A0B4J246 113 aa12.68□□□□□ -0.38
SMN1-209ENST00000514951 C2orf66Q6UXQ4 117 aa12.68□□□□□ -0.38
SMN1-209ENST00000514951 URB1-AS1Q96HZ7 61 aa12.68□□□□□ -0.38
SMN1-209ENST00000514951 KIAA1109Q2LD37 5005 aa12.67□□□□□ -0.38
SMN1-209ENST00000514951 WFDC2Q14508 124 aa12.67□□□□□ -0.38
SMN1-209ENST00000514951 RNASE13Q5GAN3 156 aaKnown RBP12.67□□□□□ -0.38
SMN1-209ENST00000514951 OPRPNQ99935 248 aaPredicted RBP12.67□□□□□ -0.38
SMN1-209ENST00000514951 CYSLTR1Q9Y271 337 aa12.67□□□□□ -0.38
SMN1-209ENST00000514951 PYGO1Q9Y3Y4 419 aa12.67□□□□□ -0.38
SMN1-209ENST00000514951 FA2HQ7L5A8 372 aa12.66□□□□□ -0.38
SMN1-209ENST00000514951 MRPS36P82909 103 aaKnown RBP12.65□□□□□ -0.38
SMN1-209ENST00000514951 BAALCQ8WXS3 180 aa12.65□□□□□ -0.38
SMN1-209ENST00000514951 DYNC1H1Q14204 4646 aaKnown RBP12.65□□□□□ -0.38
SMN1-209ENST00000514951 LINC00959A0A1B0GUT2 108 aa12.64□□□□□ -0.39
SMN1-209ENST00000514951 CHCHD10Q8WYQ3 142 aaPredicted RBP12.64□□□□□ -0.39
SMN1-209ENST00000514951 IGLV4-3A0A075B6K6 122 aa12.63□□□□□ -0.39
SMN1-209ENST00000514951 IGIPA6NJ69 53 aa12.63□□□□□ -0.39
SMN1-209ENST00000514951 LECT2O14960 151 aa12.63□□□□□ -0.39
SMN1-209ENST00000514951 LINC00614P0C842 121 aa12.63□□□□□ -0.39
SMN1-209ENST00000514951 TOMM6Q96B49 74 aa12.63□□□□□ -0.39
SMN1-209ENST00000514951 AP5S1Q9NUS5 200 aa12.63□□□□□ -0.39
SMN1-209ENST00000514951 G0S2P27469 103 aa12.62□□□□□ -0.39
SMN1-209ENST00000514951 KRTAP10-2P60368 255 aa12.62□□□□□ -0.39
SMN1-209ENST00000514951 A0A096LNJ9 63 aa12.61□□□□□ -0.39
SMN1-209ENST00000514951 GAGE12HA6NDE8 117 aa12.61□□□□□ -0.39
SMN1-209ENST00000514951 EREGO14944 169 aa12.61□□□□□ -0.39
SMN1-209ENST00000514951 SPATA12Q7Z6I5 190 aa12.61□□□□□ -0.39
SMN1-209ENST00000514951 TMEM141Q96I45 108 aa12.61□□□□□ -0.39
SMN1-209ENST00000514951 TRAV13-1A0A0B4J241 112 aa12.6□□□□□ -0.39
SMN1-209ENST00000514951 C16orf90A8MZG2 172 aa12.6□□□□□ -0.39
SMN1-209ENST00000514951 CCL25O15444 150 aa12.6□□□□□ -0.39
SMN1-209ENST00000514951 XCL1P47992 114 aa12.6□□□□□ -0.39
SMN1-209ENST00000514951 RAB5BP61020 215 aa12.6□□□□□ -0.39
SMN1-209ENST00000514951 SS18Q15532 418 aa12.6□□□□□ -0.39
SMN1-209ENST00000514951 Q8N814 137 aa12.6□□□□□ -0.39
SMN1-209ENST00000514951 TIMM17AQ99595 171 aa12.6□□□□□ -0.39
SMN1-209ENST00000514951 NPSP0C0P6 89 aa12.59□□□□□ -0.39
SMN1-209ENST00000514951 FUSP35637 526 aaKnown RBP eCLIP12.59□□□□□ -0.39
SMN1-209ENST00000514951 FOXI1Q12951 378 aa12.59□□□□□ -0.39
SMN1-209ENST00000514951 LINC00173Q6ZV60 143 aa12.59□□□□□ -0.39
SMN1-209ENST00000514951 LRP1BQ9NZR2 4599 aa12.59□□□□□ -0.39
SMN1-209ENST00000514951 C1orf196B1AJZ1 125 aa12.58□□□□□ -0.4
SMN1-209ENST00000514951 USP17L23D6RBM5 183 aa12.58□□□□□ -0.4
SMN1-209ENST00000514951 PMCHL1Q16048 86 aa12.58□□□□□ -0.4
SMN1-209ENST00000514951 ZC2HC1BQ5TFG8 222 aa12.58□□□□□ -0.4
SMN1-209ENST00000514951 ERASQ7Z444 233 aa12.58□□□□□ -0.4
SMN1-209ENST00000514951 SCGB3A1Q96QR1 104 aa12.58□□□□□ -0.4
SMN1-209ENST00000514951 KRTAP3-3Q9BYR6 98 aa12.58□□□□□ -0.4
SMN1-209ENST00000514951 KRTAP3-2Q9BYR7 98 aa12.58□□□□□ -0.4
SMN1-209ENST00000514951 IFITM10A6NMD0 228 aa12.57□□□□□ -0.4
SMN1-209ENST00000514951 CD164L2Q6UWJ8 174 aa12.57□□□□□ -0.4
SMN1-209ENST00000514951 CHCHD1Q96BP2 118 aaKnown RBP12.57□□□□□ -0.4
SMN1-209ENST00000514951 AMELXQ99217 191 aa12.57□□□□□ -0.4
SMN1-209ENST00000514951 PCLOQ9Y6V0 5065 aa12.56□□□□□ -0.4
SMN1-209ENST00000514951 LINC01549A6NIU2 74 aa12.56□□□□□ -0.4
SMN1-209ENST00000514951 TEX43Q6ZNM6 134 aa12.56□□□□□ -0.4
SMN1-209ENST00000514951 BAGE3Q86Y29 109 aa12.56□□□□□ -0.4
SMN1-209ENST00000514951 HBDP02042 147 aa12.55□□□□□ -0.4
SMN1-209ENST00000514951 LINC00310P59036 64 aa12.55□□□□□ -0.4
SMN1-209ENST00000514951 Q6ZN92 141 aa12.55□□□□□ -0.4
SMN1-209ENST00000514951 VCX2Q9H322 139 aa12.55□□□□□ -0.4
SMN1-209ENST00000514951 C15orf56Q8N910 161 aa12.54□□□□□ -0.4
SMN1-209ENST00000514951 PGPEP1Q9NXJ5 209 aa12.54□□□□□ -0.4
SMN1-209ENST00000514951 UBE2D1P51668 147 aa12.53□□□□□ -0.4
SMN1-209ENST00000514951 PDZD11Q5EBL8 140 aa12.53□□□□□ -0.4
SMN1-209ENST00000514951 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.52□□□□□ -0.41
SMN1-209ENST00000514951 HIST1H2BKO60814 126 aa12.52□□□□□ -0.41
SMN1-209ENST00000514951 SERF1AO75920 110 aa12.52□□□□□ -0.41
SMN1-209ENST00000514951 HIST1H2BJP06899 126 aa12.52□□□□□ -0.41
SMN1-209ENST00000514951 PRSS1P07477 247 aa12.52□□□□□ -0.41
SMN1-209ENST00000514951 HIST1H2BOP23527 126 aa12.52□□□□□ -0.41
SMN1-209ENST00000514951 HIST1H2BBP33778 126 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms