RNA–Protein interactions for RNA: ENST00000514428.1

RERE-218, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 3

Gene RERE, Length 273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-218ENST00000514428 SPINK4O60575 86 aa-0.52□□□□□ -2.49
RERE-218ENST00000514428 BCE1O60756 84 aa-0.52□□□□□ -2.49
RERE-218ENST00000514428 S100A3P33764 101 aa-0.52□□□□□ -2.49
RERE-218ENST00000514428 SPAG11AQ6PDA7 123 aa-0.52□□□□□ -2.49
RERE-218ENST00000514428 SCIMPQ6UWF3 145 aa-0.52□□□□□ -2.49
RERE-218ENST00000514428 SPTSSBQ8NFR3 76 aa-0.52□□□□□ -2.49
RERE-218ENST00000514428 PYDC1Q8WXC3 89 aa-0.52□□□□□ -2.49
RERE-218ENST00000514428 SCN3BQ9NY72 215 aa-0.52□□□□□ -2.49
RERE-218ENST00000514428 GOLGA4Q13439 2230 aaKnown RBP-0.52□□□□□ -2.49
RERE-218ENST00000514428 RYR1P21817 5038 aa-0.53□□□□□ -2.49
RERE-218ENST00000514428 WDR7Q9Y4E6 1490 aa-0.53□□□□□ -2.49
RERE-218ENST00000514428 FHAD1B1AJZ9 1412 aa-0.53□□□□□ -2.49
RERE-218ENST00000514428 FAM92AA1XBS5 289 aa-0.53□□□□□ -2.49
RERE-218ENST00000514428 NDUFB6O95139 128 aa-0.53□□□□□ -2.49
RERE-218ENST00000514428 TNFP01375 233 aa-0.53□□□□□ -2.49
RERE-218ENST00000514428 PIPP12273 146 aaPredicted RBP-0.53□□□□□ -2.49
RERE-218ENST00000514428 RRAS2P62070 204 aaPredicted RBP-0.53□□□□□ -2.49
RERE-218ENST00000514428 AKAP14Q86UN6 197 aa-0.53□□□□□ -2.49
RERE-218ENST00000514428 SPTSSAQ969W0 71 aa-0.53□□□□□ -2.49
RERE-218ENST00000514428 SDF2Q99470 211 aa-0.53□□□□□ -2.49
RERE-218ENST00000514428 PSMG3Q9BT73 122 aaPredicted RBP-0.53□□□□□ -2.49
RERE-218ENST00000514428 GSKIPQ9P0R6 139 aa-0.53□□□□□ -2.49
RERE-218ENST00000514428 ANKRD11Q6UB99 2663 aaPredicted RBP-0.53□□□□□ -2.49
RERE-218ENST00000514428 FAT3Q8TDW7 4589 aa-0.54□□□□□ -2.5
RERE-218ENST00000514428 IFT140Q96RY7 1462 aa-0.54□□□□□ -2.5
RERE-218ENST00000514428 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.54□□□□□ -2.53e-9■■■□□ 14.9
RERE-218ENST00000514428 FXYD6-FXYD2A0A087WZ82 144 aa-0.54□□□□□ -2.5
RERE-218ENST00000514428 I3L2K1 104 aa-0.54□□□□□ -2.5
RERE-218ENST00000514428 J3QR89 54 aa-0.54□□□□□ -2.5
RERE-218ENST00000514428 M0R2Z0 102 aa-0.54□□□□□ -2.5
RERE-218ENST00000514428 SIX6O95475 246 aa-0.54□□□□□ -2.5
RERE-218ENST00000514428 PIGYQ3MUY2 71 aa-0.54□□□□□ -2.5
RERE-218ENST00000514428 S100A7L2Q5SY68 101 aa-0.54□□□□□ -2.5
RERE-218ENST00000514428 MAFIPQ8WZ33 124 aa-0.54□□□□□ -2.5
RERE-218ENST00000514428 AGPAT4-IT1Q9H0P7 198 aa-0.54□□□□□ -2.5
RERE-218ENST00000514428 TP53AIP1Q9HCN2 124 aa-0.54□□□□□ -2.5
RERE-218ENST00000514428 LRP6O75581 1613 aa-0.54□□□□□ -2.5
RERE-218ENST00000514428 PKD1P98161 4303 aa-0.54□□□□□ -2.5
RERE-218ENST00000514428 WDR87Q6ZQQ6 2873 aa-0.55□□□□□ -2.5
RERE-218ENST00000514428 RELNP78509 3460 aa-0.55□□□□□ -2.5
RERE-218ENST00000514428 KNL1Q8NG31 2342 aa-0.55□□□□□ -2.5
RERE-218ENST00000514428 PAPPAQ13219 1627 aa-0.55□□□□□ -2.5
RERE-218ENST00000514428 TRBV6-1A0A0K0K1D8 114 aa-0.55□□□□□ -2.5
RERE-218ENST00000514428 SPAARA0A1B0GVQ0 90 aa-0.55□□□□□ -2.5
RERE-218ENST00000514428 K7ERU9 68 aa-0.55□□□□□ -2.5
RERE-218ENST00000514428 COX6B1P14854 86 aa-0.55□□□□□ -2.5
RERE-218ENST00000514428 DR1Q01658 176 aa-0.55□□□□□ -2.5
RERE-218ENST00000514428 ERCC6L2Q5T890 1561 aa-0.55□□□□□ -2.5
RERE-218ENST00000514428 RIF1Q5UIP0 2472 aaKnown RBP-0.55□□□□□ -2.5
RERE-218ENST00000514428 LAMA3Q16787 3333 aa-0.55□□□□□ -2.5
RERE-218ENST00000514428 KALRNO60229 2985 aa-0.55□□□□□ -2.5
RERE-218ENST00000514428 MRC1P22897 1456 aa-0.55□□□□□ -2.5
RERE-218ENST00000514428 ZNF518AQ6AHZ1 1483 aa-0.55□□□□□ -2.5
RERE-218ENST00000514428 ACACAQ13085 2346 aa-0.55□□□□□ -2.5
RERE-218ENST00000514428 LRRC37A2A6NM11 1700 aa-0.55□□□□□ -2.5
RERE-218ENST00000514428 PRDM2Q13029 1718 aa-0.55□□□□□ -2.5
RERE-218ENST00000514428 DNAH2Q9P225 4427 aa-0.56□□□□□ -2.5
RERE-218ENST00000514428 KIAA1109Q2LD37 5005 aa-0.56□□□□□ -2.5
RERE-218ENST00000514428 BIRC6Q9NR09 4857 aa-0.56□□□□□ -2.5
RERE-218ENST00000514428 HCG22E2RYF7 251 aa-0.56□□□□□ -2.5
RERE-218ENST00000514428 M0R135 149 aa-0.56□□□□□ -2.5
RERE-218ENST00000514428 SNCGO76070 127 aa-0.56□□□□□ -2.5
RERE-218ENST00000514428 SMIM6P0DI80 62 aa-0.56□□□□□ -2.5
RERE-218ENST00000514428 SPRR1BP22528 89 aa-0.56□□□□□ -2.5
RERE-218ENST00000514428 GUCA1AP43080 201 aaPredicted RBP-0.56□□□□□ -2.5
RERE-218ENST00000514428 RPS25P62851 125 aaKnown RBP-0.56□□□□□ -2.5
RERE-218ENST00000514428 HAMPP81172 84 aa-0.56□□□□□ -2.5
RERE-218ENST00000514428 SPRR2FQ96RM1 72 aa-0.56□□□□□ -2.5
RERE-218ENST00000514428 LINC00472Q9H8W2 130 aa-0.56□□□□□ -2.5
RERE-218ENST00000514428 CEP152O94986 1710 aa-0.56□□□□□ -2.5
RERE-218ENST00000514428 TRANK1O15050 2925 aa-0.57□□□□□ -2.5
RERE-218ENST00000514428 PKD1L2Q7Z442 2459 aa-0.57□□□□□ -2.5
RERE-218ENST00000514428 LYSTQ99698 3801 aa-0.57□□□□□ -2.5
RERE-218ENST00000514428 DNAH9Q9NYC9 4486 aa-0.57□□□□□ -2.5
RERE-218ENST00000514428 REV3LO60673 3130 aa-0.57□□□□□ -2.5
RERE-218ENST00000514428 MYH8P13535 1937 aa-0.57□□□□□ -2.5
RERE-218ENST00000514428 PPP1R17O96001 155 aa-0.57□□□□□ -2.5
RERE-218ENST00000514428 DEFB135Q30KP9 77 aa-0.57□□□□□ -2.5
RERE-218ENST00000514428 KCNRGQ8N5I3 272 aa-0.57□□□□□ -2.5
RERE-218ENST00000514428 TSTD1Q8NFU3 115 aa-0.57□□□□□ -2.5
RERE-218ENST00000514428 DPH3Q96FX2 82 aa-0.57□□□□□ -2.5
RERE-218ENST00000514428 AMELXQ99217 191 aa-0.57□□□□□ -2.5
RERE-218ENST00000514428 SEC11CQ9BY50 192 aa-0.57□□□□□ -2.5
RERE-218ENST00000514428 FXYD6Q9H0Q3 95 aa-0.57□□□□□ -2.5
RERE-218ENST00000514428 NPVFQ9HCQ7 196 aa-0.57□□□□□ -2.5
RERE-218ENST00000514428 R4GMQ9 66 aa-0.57□□□□□ -2.5
RERE-218ENST00000514428 VPS13BQ7Z7G8 4022 aa-0.57□□□□□ -2.5
RERE-218ENST00000514428 KDM5AP29375 1690 aaKnown RBP-0.57□□□□□ -2.5
RERE-218ENST00000514428 DSPP15924 2871 aaKnown RBP-0.57□□□□□ -2.5
RERE-218ENST00000514428 DMXL1Q9Y485 3027 aa-0.57□□□□□ -2.5
RERE-218ENST00000514428 NBEAQ8NFP9 2946 aa-0.58□□□□□ -2.5
RERE-218ENST00000514428 MGAM2Q2M2H8 2515 aa-0.58□□□□□ -2.5
RERE-218ENST00000514428 NWD2Q9ULI1 1742 aa-0.58□□□□□ -2.5
RERE-218ENST00000514428 ANK3Q12955 4377 aaKnown RBP-0.58□□□□□ -2.5
RERE-218ENST00000514428 ZNF236Q9UL36 1845 aa-0.58□□□□□ -2.5
RERE-218ENST00000514428 SMIM21Q3B7S5 101 aa-0.58□□□□□ -2.5
RERE-218ENST00000514428 DEFB123Q8N688 67 aa-0.58□□□□□ -2.5
RERE-218ENST00000514428 DEFB105AQ8NG35 78 aa-0.58□□□□□ -2.5
RERE-218ENST00000514428 ANP32BQ92688 251 aaKnown RBP-0.58□□□□□ -2.5
RERE-218ENST00000514428 TMEM191AQ9H0A3 160 aa-0.58□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms