RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 UFSP1Q6NVU6 142 aa4.86□□□□□ -1.63
RFC1-213ENST00000512275 LINC00612Q8N6U2 182 aa4.86□□□□□ -1.63
RFC1-213ENST00000512275 MRAP2Q96G30 205 aa4.86□□□□□ -1.63
RFC1-213ENST00000512275 C11orf68Q9H3H3 251 aaKnown RBP4.86□□□□□ -1.63
RFC1-213ENST00000512275 U3KQK5 164 aa4.86□□□□□ -1.63
RFC1-213ENST00000512275 TRAV26-1A0A087WT03 109 aa4.85□□□□□ -1.63
RFC1-213ENST00000512275 TRGV4A0A0C4DH28 118 aa4.85□□□□□ -1.63
RFC1-213ENST00000512275 LOC389332A0A1B0GUA5 103 aa4.85□□□□□ -1.63
RFC1-213ENST00000512275 HTN3P15516 51 aa4.85□□□□□ -1.63
RFC1-213ENST00000512275 C18orf32Q8TCD1 76 aa4.85□□□□□ -1.63
RFC1-213ENST00000512275 DNAH9Q9NYC9 4486 aa4.85□□□□□ -1.63
RFC1-213ENST00000512275 HUWE1Q7Z6Z7 4374 aaKnown RBP4.84□□□□□ -1.63
RFC1-213ENST00000512275 LOC100131303A0A0U1RQF7 123 aa4.84□□□□□ -1.63
RFC1-213ENST00000512275 M0QY20 66 aa4.84□□□□□ -1.63
RFC1-213ENST00000512275 PPBPP02775 128 aa4.84□□□□□ -1.63
RFC1-213ENST00000512275 C12orf74Q32Q52 190 aa4.84□□□□□ -1.63
RFC1-213ENST00000512275 RNASEKQ6P5S7 137 aaKnown RBP4.84□□□□□ -1.63
RFC1-213ENST00000512275 ZFP2Q6ZN57 461 aa4.84□□□□□ -1.63
RFC1-213ENST00000512275 NEGR1Q7Z3B1 354 aa4.84□□□□□ -1.63
RFC1-213ENST00000512275 BAGE3Q86Y29 109 aa4.84□□□□□ -1.63
RFC1-213ENST00000512275 DEFB104AQ8WTQ1 72 aa4.84□□□□□ -1.63
RFC1-213ENST00000512275 MAP1LC3AQ9H492 121 aa4.84□□□□□ -1.63
RFC1-213ENST00000512275 Q9UF83 564 aa4.84□□□□□ -1.63
RFC1-213ENST00000512275 COL7A1Q02388 2944 aa4.83□□□□□ -1.64
RFC1-213ENST00000512275 F5H768 121 aa4.83□□□□□ -1.64
RFC1-213ENST00000512275 H7C1H1 209 aa4.83□□□□□ -1.64
RFC1-213ENST00000512275 SERF1AO75920 110 aa4.83□□□□□ -1.64
RFC1-213ENST00000512275 ATP5G1P05496 136 aa4.83□□□□□ -1.64
RFC1-213ENST00000512275 S100A6P06703 90 aa4.83□□□□□ -1.64
RFC1-213ENST00000512275 IFI27P40305 119 aaPredicted RBP4.83□□□□□ -1.64
RFC1-213ENST00000512275 LCE1EQ5T753 118 aa4.83□□□□□ -1.64
RFC1-213ENST00000512275 SLC25A29Q8N8R3 303 aa4.83□□□□□ -1.64
RFC1-213ENST00000512275 C18orf15Q96N68 181 aa4.83□□□□□ -1.64
RFC1-213ENST00000512275 PPDPFQ9H3Y8 114 aa4.83□□□□□ -1.64
RFC1-213ENST00000512275 ST20Q9HBF5 79 aa4.83□□□□□ -1.64
RFC1-213ENST00000512275 A0A0J9YY99 117 aa4.82□□□□□ -1.64
RFC1-213ENST00000512275 NUPR1O60356 82 aa4.82□□□□□ -1.64
RFC1-213ENST00000512275 Q0VG73 95 aa4.82□□□□□ -1.64
RFC1-213ENST00000512275 RHOHQ15669 191 aa4.82□□□□□ -1.64
RFC1-213ENST00000512275 PDZD11Q5EBL8 140 aa4.82□□□□□ -1.64
RFC1-213ENST00000512275 FA2HQ7L5A8 372 aa4.82□□□□□ -1.64
RFC1-213ENST00000512275 ZNRF2Q8NHG8 242 aa4.82□□□□□ -1.64
RFC1-213ENST00000512275 SMIM2Q9BVW6 85 aa4.82□□□□□ -1.64
RFC1-213ENST00000512275 EDA2RQ9HAV5 297 aa4.82□□□□□ -1.64
RFC1-213ENST00000512275 NIT2Q9NQR4 276 aa4.82□□□□□ -1.64
RFC1-213ENST00000512275 LAMTOR2Q9Y2Q5 125 aa4.82□□□□□ -1.64
RFC1-213ENST00000512275 TRBV6-5A0A0K0K1A5 114 aa4.81□□□□□ -1.64
RFC1-213ENST00000512275 TRBV6-4A0A1B0GX49 114 aa4.81□□□□□ -1.64
RFC1-213ENST00000512275 SDHAF1A6NFY7 115 aa4.81□□□□□ -1.64
RFC1-213ENST00000512275 TCAPO15273 167 aa4.81□□□□□ -1.64
RFC1-213ENST00000512275 PPP1R17O96001 155 aa4.81□□□□□ -1.64
RFC1-213ENST00000512275 PMCHP20382 165 aa4.81□□□□□ -1.64
RFC1-213ENST00000512275 CRYBA4P53673 196 aa4.81□□□□□ -1.64
RFC1-213ENST00000512275 PMCHL1Q16048 86 aa4.81□□□□□ -1.64
RFC1-213ENST00000512275 NIT1Q86X76 327 aa4.81□□□□□ -1.64
RFC1-213ENST00000512275 Q8N8P6 123 aa4.81□□□□□ -1.64
RFC1-213ENST00000512275 PRADC1Q9BSG0 188 aa4.81□□□□□ -1.64
RFC1-213ENST00000512275 TMEM70Q9BUB7 260 aa4.81□□□□□ -1.64
RFC1-213ENST00000512275 HHLA3Q9XRX5 114 aa4.81□□□□□ -1.64
RFC1-213ENST00000512275 STAB2Q8WWQ8 2551 aa4.81□□□□□ -1.64
RFC1-213ENST00000512275 IGLV2-18A0A075B6J9 118 aa4.8□□□□□ -1.64
RFC1-213ENST00000512275 A0A096LPF7 62 aa4.8□□□□□ -1.64
RFC1-213ENST00000512275 TRBV10-1A0A0K0K1A3 114 aa4.8□□□□□ -1.64
RFC1-213ENST00000512275 E9PLD3 99 aa4.8□□□□□ -1.64
RFC1-213ENST00000512275 HSBP1O75506 76 aa4.8□□□□□ -1.64
RFC1-213ENST00000512275 COA6Q5JTJ3 125 aaKnown RBP4.8□□□□□ -1.64
RFC1-213ENST00000512275 VSIG2Q96IQ7 327 aa4.8□□□□□ -1.64
RFC1-213ENST00000512275 DNAJC30Q96LL9 226 aa4.8□□□□□ -1.64
RFC1-213ENST00000512275 C20orf78Q9BR46 151 aa4.8□□□□□ -1.64
RFC1-213ENST00000512275 NXT2Q9NPJ8 142 aaKnown RBP4.8□□□□□ -1.64
RFC1-213ENST00000512275 PRO0255Q9UI72 69 aa4.8□□□□□ -1.64
RFC1-213ENST00000512275 PRKDCP78527 4128 aaKnown RBP4.79□□□□□ -1.64
RFC1-213ENST00000512275 TRBV7-3A0A075B6L6 115 aa4.79□□□□□ -1.64
RFC1-213ENST00000512275 DEFB131BA0A096LNP1 70 aa4.79□□□□□ -1.64
RFC1-213ENST00000512275 IGHV1-24A0A0C4DH33 117 aa4.79□□□□□ -1.64
RFC1-213ENST00000512275 I3L3M4 83 aa4.79□□□□□ -1.64
RFC1-213ENST00000512275 LINC00614P0C842 121 aa4.79□□□□□ -1.64
RFC1-213ENST00000512275 POLR2KP53803 58 aaKnown RBP4.79□□□□□ -1.64
RFC1-213ENST00000512275 UBE2D3P61077 147 aa4.79□□□□□ -1.64
RFC1-213ENST00000512275 UBE2D2P62837 147 aa4.79□□□□□ -1.64
RFC1-213ENST00000512275 HIST3H2BBQ8N257 126 aa4.79□□□□□ -1.64
RFC1-213ENST00000512275 FAM19A2Q8N3H0 131 aa4.79□□□□□ -1.64
RFC1-213ENST00000512275 CHCHD1Q96BP2 118 aaKnown RBP4.79□□□□□ -1.64
RFC1-213ENST00000512275 TRAV10A0A0B4J240 114 aa4.78□□□□□ -1.64
RFC1-213ENST00000512275 TRBV27A0A0K0K1C4 114 aa4.78□□□□□ -1.64
RFC1-213ENST00000512275 LINC00694P0DN24 101 aa4.78□□□□□ -1.64
RFC1-213ENST00000512275 S100A2P29034 98 aa4.78□□□□□ -1.64
RFC1-213ENST00000512275 FCER1GP30273 86 aa4.78□□□□□ -1.64
RFC1-213ENST00000512275 RPL32P62910 135 aaKnown RBP4.78□□□□□ -1.64
RFC1-213ENST00000512275 CXCL6P80162 114 aa4.78□□□□□ -1.64
RFC1-213ENST00000512275 KIR2DL4Q99706 377 aa4.78□□□□□ -1.64
RFC1-213ENST00000512275 FBN3Q75N90 2809 aa4.78□□□□□ -1.64
RFC1-213ENST00000512275 A0A096LNJ9 63 aa4.77□□□□□ -1.65
RFC1-213ENST00000512275 LINC01546A6NGU7 62 aa4.77□□□□□ -1.65
RFC1-213ENST00000512275 HBDP02042 147 aa4.77□□□□□ -1.65
RFC1-213ENST00000512275 ESDP10768 282 aa4.77□□□□□ -1.65
RFC1-213ENST00000512275 FABP4P15090 132 aa4.77□□□□□ -1.65
RFC1-213ENST00000512275 COTL1Q14019 142 aa4.77□□□□□ -1.65
RFC1-213ENST00000512275 ICOSQ9Y6W8 199 aa4.77□□□□□ -1.65
RFC1-213ENST00000512275 RPL39P62891 51 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms