RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 ABRACLQ9P1F3 81 aa1.56□□□□□ -2.16
HMGB1P47-201ENST00000511281 COMMD3Q9UBI1 195 aa1.56□□□□□ -2.16
HMGB1P47-201ENST00000511281 METTL1Q9UBP6 276 aaKnown RBP1.56□□□□□ -2.16
HMGB1P47-201ENST00000511281 BDP1A6H8Y1 2624 aa1.56□□□□□ -2.16
HMGB1P47-201ENST00000511281 MUC22E2RYF6 1773 aaPredicted RBP1.56□□□□□ -2.16
HMGB1P47-201ENST00000511281 AHCTF1Q8WYP5 2266 aa1.55□□□□□ -2.16
HMGB1P47-201ENST00000511281 CACNA1EQ15878 2313 aa1.55□□□□□ -2.16
HMGB1P47-201ENST00000511281 A0A0G2JMM0 328 aa1.55□□□□□ -2.16
HMGB1P47-201ENST00000511281 A0A1W2PPB8 328 aa1.55□□□□□ -2.16
HMGB1P47-201ENST00000511281 A0A1W2PRS3 328 aa1.55□□□□□ -2.16
HMGB1P47-201ENST00000511281 A6NIN4 97 aa1.55□□□□□ -2.16
HMGB1P47-201ENST00000511281 KIR3DP1A8MWS1 328 aa1.55□□□□□ -2.16
HMGB1P47-201ENST00000511281 PDCD5O14737 125 aa1.55□□□□□ -2.16
HMGB1P47-201ENST00000511281 HIST1H1BP16401 226 aaKnown RBP1.55□□□□□ -2.16
HMGB1P47-201ENST00000511281 MRPS10P82664 201 aaKnown RBP1.55□□□□□ -2.16
HMGB1P47-201ENST00000511281 TCTEX1D1Q8N7M0 179 aa1.55□□□□□ -2.16
HMGB1P47-201ENST00000511281 C5orf17Q8NAS9 161 aa1.55□□□□□ -2.16
HMGB1P47-201ENST00000511281 OR10AC1Q8NH08 325 aa1.55□□□□□ -2.16
HMGB1P47-201ENST00000511281 OTOSQ8NHW6 89 aa1.55□□□□□ -2.16
HMGB1P47-201ENST00000511281 SMIM4Q8WVI0 70 aa1.55□□□□□ -2.16
HMGB1P47-201ENST00000511281 PAIP2BQ9ULR5 123 aaKnown RBP1.55□□□□□ -2.16
HMGB1P47-201ENST00000511281 R4GMQ9 66 aa1.55□□□□□ -2.16
HMGB1P47-201ENST00000511281 PLXNA2O75051 1894 aa1.54□□□□□ -2.16
HMGB1P47-201ENST00000511281 ZGRF1Q86YA3 2104 aa1.54□□□□□ -2.16
HMGB1P47-201ENST00000511281 MED12Q93074 2177 aa1.54□□□□□ -2.16
HMGB1P47-201ENST00000511281 NAP1L6A6NFF2 107 aa1.54□□□□□ -2.16
HMGB1P47-201ENST00000511281 RPS27P42677 84 aaKnown RBP1.54□□□□□ -2.16
HMGB1P47-201ENST00000511281 CKS1BP61024 79 aa1.54□□□□□ -2.16
HMGB1P47-201ENST00000511281 TOMM5Q8N4H5 51 aa1.54□□□□□ -2.16
HMGB1P47-201ENST00000511281 MAFIPQ8WZ33 124 aa1.54□□□□□ -2.16
HMGB1P47-201ENST00000511281 PROK2Q9HC23 129 aa1.54□□□□□ -2.16
HMGB1P47-201ENST00000511281 COPZ2Q9P299 210 aa1.54□□□□□ -2.16
HMGB1P47-201ENST00000511281 FRYLO94915 3013 aa1.54□□□□□ -2.16
HMGB1P47-201ENST00000511281 CFAP47Q6ZTR5 3102 aa1.54□□□□□ -2.16
HMGB1P47-201ENST00000511281 NINQ8N4C6 2090 aa1.54□□□□□ -2.16
HMGB1P47-201ENST00000511281 SPTA1P02549 2419 aa1.54□□□□□ -2.16
HMGB1P47-201ENST00000511281 EP300Q09472 2414 aaPredicted RBP1.54□□□□□ -2.16
HMGB1P47-201ENST00000511281 FBN3Q75N90 2809 aa1.53□□□□□ -2.16
HMGB1P47-201ENST00000511281 H3BSH0 61 aa1.53□□□□□ -2.16
HMGB1P47-201ENST00000511281 NDUFB6O95139 128 aa1.53□□□□□ -2.16
HMGB1P47-201ENST00000511281 HLA-DRB4P13762 266 aa1.53□□□□□ -2.16
HMGB1P47-201ENST00000511281 CKS2P33552 79 aa1.53□□□□□ -2.16
HMGB1P47-201ENST00000511281 FAUP35544 74 aaKnown RBP1.53□□□□□ -2.16
HMGB1P47-201ENST00000511281 GUCA1AP43080 201 aaPredicted RBP1.53□□□□□ -2.16
HMGB1P47-201ENST00000511281 AKR1D1P51857 326 aa1.53□□□□□ -2.16
HMGB1P47-201ENST00000511281 RRAS2P62070 204 aaPredicted RBP1.53□□□□□ -2.16
HMGB1P47-201ENST00000511281 SSBP1Q04837 148 aaKnown RBP1.53□□□□□ -2.16
HMGB1P47-201ENST00000511281 GLYATL3Q5SZD4 288 aa1.53□□□□□ -2.16
HMGB1P47-201ENST00000511281 C10orf128Q5T292 105 aa1.53□□□□□ -2.16
HMGB1P47-201ENST00000511281 S100A16Q96FQ6 103 aaKnown RBP1.53□□□□□ -2.16
HMGB1P47-201ENST00000511281 TAS2R8Q9NYW2 309 aa1.53□□□□□ -2.16
HMGB1P47-201ENST00000511281 BOKQ9UMX3 212 aaPredicted RBP1.53□□□□□ -2.16
HMGB1P47-201ENST00000511281 HLA-DRB4X5D2U9 266 aa1.53□□□□□ -2.16
HMGB1P47-201ENST00000511281 FRYQ5TBA9 3013 aa1.53□□□□□ -2.17
HMGB1P47-201ENST00000511281 MAP1BP46821 2468 aaKnown RBP1.52□□□□□ -2.17
HMGB1P47-201ENST00000511281 GVINP1Q7Z2Y8 2422 aa1.52□□□□□ -2.17
HMGB1P47-201ENST00000511281 CNTRLQ7Z7A1 2325 aa1.52□□□□□ -2.17
HMGB1P47-201ENST00000511281 LOC400499M0QZD8 3231 aa1.52□□□□□ -2.17
HMGB1P47-201ENST00000511281 SNRPGP15A8MWD9 76 aa1.52□□□□□ -2.17
HMGB1P47-201ENST00000511281 TMEM14DPA8MWL7 114 aa1.52□□□□□ -2.17
HMGB1P47-201ENST00000511281 M0R135 149 aa1.52□□□□□ -2.17
HMGB1P47-201ENST00000511281 NCR3O14931 201 aa1.52□□□□□ -2.17
HMGB1P47-201ENST00000511281 CYB5AP00167 134 aa1.52□□□□□ -2.17
HMGB1P47-201ENST00000511281 APOC1P02654 83 aa1.52□□□□□ -2.17
HMGB1P47-201ENST00000511281 IL5P05113 134 aa1.52□□□□□ -2.17
HMGB1P47-201ENST00000511281 AKAIN1P0CW23 69 aa1.52□□□□□ -2.17
HMGB1P47-201ENST00000511281 HIST1H1DP16402 221 aaKnown RBP1.52□□□□□ -2.17
HMGB1P47-201ENST00000511281 EFNA4P52798 201 aa1.52□□□□□ -2.17
HMGB1P47-201ENST00000511281 PCBD1P61457 104 aa1.52□□□□□ -2.17
HMGB1P47-201ENST00000511281 PLGLB1Q02325 96 aa1.52□□□□□ -2.17
HMGB1P47-201ENST00000511281 Q5BKY6 102 aa1.52□□□□□ -2.17
HMGB1P47-201ENST00000511281 C9orf62Q8N4C0 152 aa1.52□□□□□ -2.17
HMGB1P47-201ENST00000511281 SPTSSAQ969W0 71 aa1.52□□□□□ -2.17
HMGB1P47-201ENST00000511281 LIMD2Q9BT23 127 aa1.52□□□□□ -2.17
HMGB1P47-201ENST00000511281 LPAR5Q9H1C0 372 aa1.52□□□□□ -2.17
HMGB1P47-201ENST00000511281 ATG5Q9H1Y0 275 aa1.52□□□□□ -2.17
HMGB1P47-201ENST00000511281 SCP2D1Q9UJQ7 156 aa1.52□□□□□ -2.17
HMGB1P47-201ENST00000511281 FAM186AA6NE01 2351 aa1.52□□□□□ -2.17
HMGB1P47-201ENST00000511281 CELSR3Q9NYQ7 3312 aa1.52□□□□□ -2.17
HMGB1P47-201ENST00000511281 LAMA1P25391 3075 aa1.52□□□□□ -2.17
HMGB1P47-201ENST00000511281 LAMA5O15230 3695 aa1.52□□□□□ -2.17
HMGB1P47-201ENST00000511281 CACNA1AO00555 2505 aa1.51□□□□□ -2.17
HMGB1P47-201ENST00000511281 PIEZO1Q92508 2521 aa1.51□□□□□ -2.17
HMGB1P47-201ENST00000511281 PTPRZ1P23471 2315 aaPredicted RBP1.51□□□□□ -2.17
HMGB1P47-201ENST00000511281 LOC107984156A0A0G2JMH3 177 aa1.51□□□□□ -2.17
HMGB1P47-201ENST00000511281 MRPL33O75394 65 aaKnown RBP1.51□□□□□ -2.17
HMGB1P47-201ENST00000511281 SNAPC5O75971 98 aa1.51□□□□□ -2.17
HMGB1P47-201ENST00000511281 CD3DP04234 171 aa1.51□□□□□ -2.17
HMGB1P47-201ENST00000511281 S100A1P23297 94 aa1.51□□□□□ -2.17
HMGB1P47-201ENST00000511281 GNG2P59768 71 aa1.51□□□□□ -2.17
HMGB1P47-201ENST00000511281 LINC00575Q6W349 94 aa1.51□□□□□ -2.17
HMGB1P47-201ENST00000511281 IDO2Q6ZQW0 420 aa1.51□□□□□ -2.17
HMGB1P47-201ENST00000511281 ARL17AQ8IVW1 177 aa1.51□□□□□ -2.17
HMGB1P47-201ENST00000511281 PP6455Q8WZ26 134 aa1.51□□□□□ -2.17
HMGB1P47-201ENST00000511281 SMIM7Q9BQ49 75 aa1.51□□□□□ -2.17
HMGB1P47-201ENST00000511281 LINC00470Q9BZP3 86 aa1.51□□□□□ -2.17
HMGB1P47-201ENST00000511281 BANF2Q9H503 90 aa1.51□□□□□ -2.17
HMGB1P47-201ENST00000511281 V9GYS6 101 aa1.51□□□□□ -2.17
HMGB1P47-201ENST00000511281 FREM2Q5SZK8 3169 aa1.51□□□□□ -2.17
HMGB1P47-201ENST00000511281 RIF1Q5UIP0 2472 aaKnown RBP1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms