RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 PRSS1P07477 247 aa9.13□□□□□ -0.95
DDX41-212ENST00000511040 ZNF25P17030 456 aaPredicted RBP9.13□□□□□ -0.95
DDX41-212ENST00000511040 C14orf177Q52M58 125 aa9.13□□□□□ -0.95
DDX41-212ENST00000511040 FAM30AQ9NZY2 134 aa9.13□□□□□ -0.95
DDX41-212ENST00000511040 TMEM136Q6ZRR5 245 aa9.12□□□□□ -0.95
DDX41-212ENST00000511040 ORMDL3Q8N138 153 aa9.12□□□□□ -0.95
DDX41-212ENST00000511040 SVBPQ8N300 66 aa9.12□□□□□ -0.95
DDX41-212ENST00000511040 PRELID3AQ96N28 172 aa9.12□□□□□ -0.95
DDX41-212ENST00000511040 SMIM2Q9BVW6 85 aa9.12□□□□□ -0.95
DDX41-212ENST00000511040 SCO1O75880 301 aa9.11□□□□□ -0.95
DDX41-212ENST00000511040 PPBPP02775 128 aa9.11□□□□□ -0.95
DDX41-212ENST00000511040 CHCHD10Q8WYQ3 142 aaPredicted RBP9.11□□□□□ -0.95
DDX41-212ENST00000511040 CTDSP1Q9GZU7 261 aa9.11□□□□□ -0.95
DDX41-212ENST00000511040 ABCA13Q86UQ4 5058 aa9.1□□□□□ -0.95
DDX41-212ENST00000511040 TCAPO15273 167 aa9.1□□□□□ -0.95
DDX41-212ENST00000511040 RPL32P62910 135 aaKnown RBP9.1□□□□□ -0.95
DDX41-212ENST00000511040 RNASE13Q5GAN3 156 aaKnown RBP9.1□□□□□ -0.95
DDX41-212ENST00000511040 DGAT2L7PQ6IED9 249 aa9.1□□□□□ -0.95
DDX41-212ENST00000511040 MRPL52Q86TS9 123 aaKnown RBP9.1□□□□□ -0.95
DDX41-212ENST00000511040 IMMP2LQ96T52 175 aa9.1□□□□□ -0.95
DDX41-212ENST00000511040 LOC389332A0A1B0GUA5 103 aa9.09□□□□□ -0.95
DDX41-212ENST00000511040 hDV102S1A0JD36 115 aa9.09□□□□□ -0.95
DDX41-212ENST00000511040 PHOX2AO14813 284 aa9.09□□□□□ -0.95
DDX41-212ENST00000511040 SNAPINO95295 136 aa9.09□□□□□ -0.95
DDX41-212ENST00000511040 S100A1P23297 94 aa9.09□□□□□ -0.95
DDX41-212ENST00000511040 XCL1P47992 114 aa9.09□□□□□ -0.95
DDX41-212ENST00000511040 RHEBQ15382 184 aa9.09□□□□□ -0.95
DDX41-212ENST00000511040 Q8N1X5 172 aa9.09□□□□□ -0.95
DDX41-212ENST00000511040 ZNF664Q8N3J9 261 aa9.09□□□□□ -0.95
DDX41-212ENST00000511040 RPS10P5Q9NQ39 176 aa9.09□□□□□ -0.95
DDX41-212ENST00000511040 CDC42SE2Q9NRR3 84 aa9.09□□□□□ -0.95
DDX41-212ENST00000511040 UBE2D4Q9Y2X8 147 aa9.09□□□□□ -0.95
DDX41-212ENST00000511040 LINC00959A0A1B0GUT2 108 aa9.08□□□□□ -0.96
DDX41-212ENST00000511040 SMR3BP02814 79 aaPredicted RBP9.08□□□□□ -0.96
DDX41-212ENST00000511040 RPL39P62891 51 aaKnown RBP9.08□□□□□ -0.96
DDX41-212ENST00000511040 YPEL4Q96NS1 127 aa9.08□□□□□ -0.96
DDX41-212ENST00000511040 CCL25O15444 150 aa9.07□□□□□ -0.96
DDX41-212ENST00000511040 FOXI1Q12951 378 aa9.07□□□□□ -0.96
DDX41-212ENST00000511040 Q6ZUT4 128 aa9.07□□□□□ -0.96
DDX41-212ENST00000511040 CBLN2Q8IUK8 224 aa9.07□□□□□ -0.96
DDX41-212ENST00000511040 DNAH8Q96JB1 4490 aa9.07□□□□□ -0.96
DDX41-212ENST00000511040 RAB5AP20339 215 aa9.06□□□□□ -0.96
DDX41-212ENST00000511040 S100PP25815 95 aa9.06□□□□□ -0.96
DDX41-212ENST00000511040 SMAGPQ0VAQ4 97 aa9.06□□□□□ -0.96
DDX41-212ENST00000511040 KIAA1644Q3SXP7 199 aa9.06□□□□□ -0.96
DDX41-212ENST00000511040 HIGD2BQ4VC39 106 aa9.06□□□□□ -0.96
DDX41-212ENST00000511040 C15orf56Q8N910 161 aa9.06□□□□□ -0.96
DDX41-212ENST00000511040 TMEM18Q96B42 140 aa9.06□□□□□ -0.96
DDX41-212ENST00000511040 MAP1LC3AQ9H492 121 aa9.06□□□□□ -0.96
DDX41-212ENST00000511040 SS18Q15532 418 aa9.05□□□□□ -0.96
DDX41-212ENST00000511040 Q6ZSA8 131 aa9.05□□□□□ -0.96
DDX41-212ENST00000511040 OPRPNQ99935 248 aaPredicted RBP9.05□□□□□ -0.96
DDX41-212ENST00000511040 CSDC2Q9Y534 153 aaKnown RBP9.05□□□□□ -0.96
DDX41-212ENST00000511040 TRAV9-1A0A075B6T8 112 aa9.04□□□□□ -0.96
DDX41-212ENST00000511040 TRAV13-1A0A0B4J241 112 aa9.04□□□□□ -0.96
DDX41-212ENST00000511040 SLPIP03973 132 aa9.04□□□□□ -0.96
DDX41-212ENST00000511040 CFAP161Q6P656 301 aa9.04□□□□□ -0.96
DDX41-212ENST00000511040 TIMM21Q9BVV7 248 aa9.04□□□□□ -0.96
DDX41-212ENST00000511040 AP5S1Q9NUS5 200 aa9.04□□□□□ -0.96
DDX41-212ENST00000511040 LAMTOR2Q9Y2Q5 125 aa9.04□□□□□ -0.96
DDX41-212ENST00000511040 EPM2AB3EWF7 344 aa9.03□□□□□ -0.96
DDX41-212ENST00000511040 Q8N8P6 123 aa9.03□□□□□ -0.96
DDX41-212ENST00000511040 FAM104AQ969W3 186 aa9.03□□□□□ -0.96
DDX41-212ENST00000511040 TGIF2-C20orf24A0A0A6YYL0 155 aa9.02□□□□□ -0.97
DDX41-212ENST00000511040 PRSS47A8MTI9 375 aa9.02□□□□□ -0.97
DDX41-212ENST00000511040 Q5VSD8 79 aa9.02□□□□□ -0.97
DDX41-212ENST00000511040 CD164L2Q6UWJ8 174 aa9.02□□□□□ -0.97
DDX41-212ENST00000511040 SCXQ7RTU7 201 aa9.02□□□□□ -0.97
DDX41-212ENST00000511040 C9orf163Q8N9P6 203 aa9.02□□□□□ -0.97
DDX41-212ENST00000511040 SPANXA1Q9NS26 97 aa9.02□□□□□ -0.97
DDX41-212ENST00000511040 CNBPP62633 177 aaKnown RBP9.01□□□□□ -0.97
DDX41-212ENST00000511040 LINC00526Q96FQ7 95 aa9.01□□□□□ -0.97
DDX41-212ENST00000511040 C1orf196B1AJZ1 125 aa9□□□□□ -0.97
DDX41-212ENST00000511040 IFI27P40305 119 aaPredicted RBP9□□□□□ -0.97
DDX41-212ENST00000511040 CHAC1Q9BUX1 264 aa9□□□□□ -0.97
DDX41-212ENST00000511040 GNB1LQ9BYB4 327 aa9□□□□□ -0.97
DDX41-212ENST00000511040 SMCO4Q9NRQ5 59 aa9□□□□□ -0.97
DDX41-212ENST00000511040 GVQW2A0A096LPI5 108 aaPredicted RBP8.99□□□□□ -0.97
DDX41-212ENST00000511040 IGHV1-58A0A0C4DH39 117 aa8.99□□□□□ -0.97
DDX41-212ENST00000511040 COLCA2A8K830 154 aa8.99□□□□□ -0.97
DDX41-212ENST00000511040 MRPS36P82909 103 aaKnown RBP8.99□□□□□ -0.97
DDX41-212ENST00000511040 SDIM1Q6ZPB5 146 aa8.99□□□□□ -0.97
DDX41-212ENST00000511040 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.99□□□□□ -0.97
DDX41-212ENST00000511040 IGHV3-64A0A075B6Q5 118 aa8.98□□□□□ -0.97
DDX41-212ENST00000511040 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.98□□□□□ -0.97
DDX41-212ENST00000511040 IFITM10A6NMD0 228 aa8.98□□□□□ -0.97
DDX41-212ENST00000511040 PANO1I0J062 215 aa8.98□□□□□ -0.97
DDX41-212ENST00000511040 COX7A2LO14548 114 aa8.98□□□□□ -0.97
DDX41-212ENST00000511040 MALP21145 153 aa8.98□□□□□ -0.97
DDX41-212ENST00000511040 C5orf38Q86SI9 138 aa8.98□□□□□ -0.97
DDX41-212ENST00000511040 CIRBP-AS1Q8TBR5 109 aa8.98□□□□□ -0.97
DDX41-212ENST00000511040 MRPL18Q9H0U6 180 aaKnown RBP8.98□□□□□ -0.97
DDX41-212ENST00000511040 NXT2Q9NPJ8 142 aaKnown RBP8.98□□□□□ -0.97
DDX41-212ENST00000511040 FAT1Q14517 4588 aa8.98□□□□□ -0.97
DDX41-212ENST00000511040 IGLV4-3A0A075B6K6 122 aa8.97□□□□□ -0.97
DDX41-212ENST00000511040 FAM229AH3BQW9 127 aa8.97□□□□□ -0.97
DDX41-212ENST00000511040 FABP9Q0Z7S8 132 aa8.97□□□□□ -0.97
DDX41-212ENST00000511040 ZC2HC1BQ5TFG8 222 aa8.97□□□□□ -0.97
DDX41-212ENST00000511040 C2orf66Q6UXQ4 117 aa8.97□□□□□ -0.97
DDX41-212ENST00000511040 CYSLTR1Q9Y271 337 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms