RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 MTURNQ8N3F0 131 aa8.01□□□□□ -1.13
SH3RF1-203ENST00000508685 SPANXA1Q9NS26 97 aa8.01□□□□□ -1.13
SH3RF1-203ENST00000508685 TRRAPQ9Y4A5 3859 aa8.01□□□□□ -1.13
SH3RF1-203ENST00000508685 A0A1B0GV72 72 aa8□□□□□ -1.13
SH3RF1-203ENST00000508685 A4D1N5 150 aa8□□□□□ -1.13
SH3RF1-203ENST00000508685 TMEM262E9PQX1 116 aa8□□□□□ -1.13
SH3RF1-203ENST00000508685 TMEM263Q8WUH6 116 aaKnown RBP8□□□□□ -1.13
SH3RF1-203ENST00000508685 COL6A5A8TX70 2615 aa8□□□□□ -1.13
SH3RF1-203ENST00000508685 A0A0J9YXV3 536 aa8□□□□□ -1.13
SH3RF1-203ENST00000508685 IGHV3-33P01772 117 aa8□□□□□ -1.13
SH3RF1-203ENST00000508685 ZNF415Q09FC8 603 aa8□□□□□ -1.13
SH3RF1-203ENST00000508685 RNF183Q96D59 192 aa8□□□□□ -1.13
SH3RF1-203ENST00000508685 OPRPNQ99935 248 aaPredicted RBP8□□□□□ -1.13
SH3RF1-203ENST00000508685 TIMM21Q9BVV7 248 aa8□□□□□ -1.13
SH3RF1-203ENST00000508685 TINCRA0A1B0GVN0 87 aa7.99□□□□□ -1.13
SH3RF1-203ENST00000508685 LINC01600Q96MT4 127 aa7.99□□□□□ -1.13
SH3RF1-203ENST00000508685 SPXQ9BT56 116 aa7.99□□□□□ -1.13
SH3RF1-203ENST00000508685 TRAV25A0A0B4J276 109 aa7.98□□□□□ -1.13
SH3RF1-203ENST00000508685 IGHV1-58A0A0C4DH39 117 aa7.98□□□□□ -1.13
SH3RF1-203ENST00000508685 A0A0J9YXY3 114 aa7.98□□□□□ -1.13
SH3RF1-203ENST00000508685 INSL3P51460 131 aa7.98□□□□□ -1.13
SH3RF1-203ENST00000508685 MUSTN1Q8IVN3 82 aa7.98□□□□□ -1.13
SH3RF1-203ENST00000508685 NOTCH3Q9UM47 2321 aa7.98□□□□□ -1.13
SH3RF1-203ENST00000508685 IGHV3-30-3P0DP02 117 aa7.98□□□□□ -1.13
SH3RF1-203ENST00000508685 DEFB104AQ8WTQ1 72 aa7.98□□□□□ -1.13
SH3RF1-203ENST00000508685 SPANXDQ9BXN6 97 aa7.98□□□□□ -1.13
SH3RF1-203ENST00000508685 SPANXCQ9NY87 97 aa7.98□□□□□ -1.13
SH3RF1-203ENST00000508685 TRBV30A0A0K0K1B3 111 aa7.97□□□□□ -1.13
SH3RF1-203ENST00000508685 ATXN8Q156A1 80 aa7.97□□□□□ -1.13
SH3RF1-203ENST00000508685 CLUHP3Q96NS8 147 aa7.97□□□□□ -1.13
SH3RF1-203ENST00000508685 WFDC10AQ9H1F0 79 aa7.97□□□□□ -1.13
SH3RF1-203ENST00000508685 FBN1P35555 2871 aaKnown RBP7.97□□□□□ -1.13
SH3RF1-203ENST00000508685 IGLV1-51P01701 117 aa7.96□□□□□ -1.13
SH3RF1-203ENST00000508685 STHQ8IWL8 128 aa7.96□□□□□ -1.13
SH3RF1-203ENST00000508685 XCL2Q9UBD3 114 aa7.96□□□□□ -1.13
SH3RF1-203ENST00000508685 SLC25A20O43772 301 aa7.96□□□□□ -1.14
SH3RF1-203ENST00000508685 TIMM17BO60830 172 aa7.96□□□□□ -1.14
SH3RF1-203ENST00000508685 BEAN1Q3B7T3 259 aa7.96□□□□□ -1.14
SH3RF1-203ENST00000508685 SFTA2Q6UW10 78 aa7.96□□□□□ -1.14
SH3RF1-203ENST00000508685 CDIP1Q9H305 208 aa7.96□□□□□ -1.14
SH3RF1-203ENST00000508685 IGHV3-53P01767 116 aa7.95□□□□□ -1.14
SH3RF1-203ENST00000508685 IFITM1P13164 125 aa7.95□□□□□ -1.14
SH3RF1-203ENST00000508685 CARD19Q96LW7 228 aa7.95□□□□□ -1.14
SH3RF1-203ENST00000508685 INSP01308 110 aa7.95□□□□□ -1.14
SH3RF1-203ENST00000508685 COX6CP09669 75 aa7.95□□□□□ -1.14
SH3RF1-203ENST00000508685 TIRAPP58753 221 aa7.95□□□□□ -1.14
SH3RF1-203ENST00000508685 Q1RN00 199 aa7.95□□□□□ -1.14
SH3RF1-203ENST00000508685 VSIG2Q96IQ7 327 aa7.95□□□□□ -1.14
SH3RF1-203ENST00000508685 LINC01587Q99440 93 aa7.95□□□□□ -1.14
SH3RF1-203ENST00000508685 CHCHD7Q9BUK0 85 aa7.95□□□□□ -1.14
SH3RF1-203ENST00000508685 NDUFA12Q9UI09 145 aa7.95□□□□□ -1.14
SH3RF1-203ENST00000508685 UBE2D4Q9Y2X8 147 aa7.95□□□□□ -1.14
SH3RF1-203ENST00000508685 PF4P02776 101 aa7.94□□□□□ -1.14
SH3RF1-203ENST00000508685 MDFIQ99750 246 aa7.94□□□□□ -1.14
SH3RF1-203ENST00000508685 IGHV3-64A0A075B6Q5 118 aa7.93□□□□□ -1.14
SH3RF1-203ENST00000508685 IGHV3OR16-12A0A075B7B8 117 aa7.93□□□□□ -1.14
SH3RF1-203ENST00000508685 C9JAW5 83 aa7.93□□□□□ -1.14
SH3RF1-203ENST00000508685 RS1O15537 224 aa7.93□□□□□ -1.14
SH3RF1-203ENST00000508685 SPINK8P0C7L1 97 aa7.93□□□□□ -1.14
SH3RF1-203ENST00000508685 MIAQ16674 131 aa7.93□□□□□ -1.14
SH3RF1-203ENST00000508685 Q6ZUT4 128 aa7.93□□□□□ -1.14
SH3RF1-203ENST00000508685 ANKRD29Q8N6D5 301 aa7.93□□□□□ -1.14
SH3RF1-203ENST00000508685 FAM104AQ969W3 186 aa7.93□□□□□ -1.14
SH3RF1-203ENST00000508685 LITAFQ99732 161 aa7.93□□□□□ -1.14
SH3RF1-203ENST00000508685 GEMIN7Q9H840 131 aaKnown RBP7.93□□□□□ -1.14
SH3RF1-203ENST00000508685 IGHV3-73A0A0B4J1V6 119 aa7.93□□□□□ -1.14
SH3RF1-203ENST00000508685 ZFAND6Q6FIF0 208 aa7.93□□□□□ -1.14
SH3RF1-203ENST00000508685 C11orf72Q8NBR9 251 aa7.93□□□□□ -1.14
SH3RF1-203ENST00000508685 SPATA3Q8NHX4 192 aa7.93□□□□□ -1.14
SH3RF1-203ENST00000508685 COPS9Q8WXC6 57 aa7.93□□□□□ -1.14
SH3RF1-203ENST00000508685 PRSS2P07478 247 aa7.92□□□□□ -1.14
SH3RF1-203ENST00000508685 CKS1BP61024 79 aa7.92□□□□□ -1.14
SH3RF1-203ENST00000508685 CIRBPQ14011 172 aaKnown RBP7.92□□□□□ -1.14
SH3RF1-203ENST00000508685 KRTAP24-1Q3LI83 254 aa7.92□□□□□ -1.14
SH3RF1-203ENST00000508685 LINC01620Q4KN68 170 aa7.92□□□□□ -1.14
SH3RF1-203ENST00000508685 LINC00482Q8N8I6 264 aa7.92□□□□□ -1.14
SH3RF1-203ENST00000508685 C19orf73Q9NVV2 129 aa7.92□□□□□ -1.14
SH3RF1-203ENST00000508685 STAB1Q9NY15 2570 aa7.92□□□□□ -1.14
SH3RF1-203ENST00000508685 IGLV5-45A0A087WSX0 123 aa7.91□□□□□ -1.14
SH3RF1-203ENST00000508685 TRBV10-2A0A0K0K1G8 114 aa7.91□□□□□ -1.14
SH3RF1-203ENST00000508685 EIF4EBP3O60516 100 aaPredicted RBP7.91□□□□□ -1.14
SH3RF1-203ENST00000508685 C1orf158Q8N1D5 194 aa7.91□□□□□ -1.14
SH3RF1-203ENST00000508685 NBEAL2Q6ZNJ1 2754 aa7.91□□□□□ -1.14
SH3RF1-203ENST00000508685 RPL13AP40429 203 aaKnown RBP7.91□□□□□ -1.14
SH3RF1-203ENST00000508685 DGAT2L7PQ6IED9 249 aa7.91□□□□□ -1.14
SH3RF1-203ENST00000508685 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.91□□□□□ -1.14
SH3RF1-203ENST00000508685 TRAV8-3A0A0A6YYJ7 113 aa7.9□□□□□ -1.14
SH3RF1-203ENST00000508685 H7C2G1 150 aa7.9□□□□□ -1.14
SH3RF1-203ENST00000508685 GIG44P09565 113 aaPredicted RBP7.9□□□□□ -1.14
SH3RF1-203ENST00000508685 HERVK_113P63121 156 aa7.9□□□□□ -1.14
SH3RF1-203ENST00000508685 FAM19A3Q7Z5A8 133 aa7.9□□□□□ -1.14
SH3RF1-203ENST00000508685 NDUFA1O15239 70 aa7.9□□□□□ -1.15
SH3RF1-203ENST00000508685 RPL35AP18077 110 aaKnown RBP7.9□□□□□ -1.15
SH3RF1-203ENST00000508685 CSDC2Q9Y534 153 aaKnown RBP7.9□□□□□ -1.15
SH3RF1-203ENST00000508685 ICOSQ9Y6W8 199 aa7.9□□□□□ -1.15
SH3RF1-203ENST00000508685 TRBV10-1A0A0K0K1A3 114 aa7.89□□□□□ -1.15
SH3RF1-203ENST00000508685 H3BT86 120 aa7.89□□□□□ -1.15
SH3RF1-203ENST00000508685 CMC4P56277 68 aaPredicted RBP7.89□□□□□ -1.15
SH3RF1-203ENST00000508685 CEMP1Q6PRD7 247 aaPredicted RBP7.89□□□□□ -1.15
SH3RF1-203ENST00000508685 Q6ZSN1 163 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms