RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 ARHGEF5Q12774 1597 aa2.91□□□□□ -1.94
NIPBL-204ENST00000504430 TP53TG3Q9ULZ0 132 aa2.91□□□□□ -1.94
NIPBL-204ENST00000504430 AFDNP55196 1824 aaKnown RBP2.91□□□□□ -1.94
NIPBL-204ENST00000504430 A0A087WVE0 104 aa2.91□□□□□ -1.94
NIPBL-204ENST00000504430 LOC285095A0A1B0GVY8 99 aa2.91□□□□□ -1.94
NIPBL-204ENST00000504430 GDF5OSQ5U4N7 250 aa2.91□□□□□ -1.94
NIPBL-204ENST00000504430 LINC00304Q8N9R0 145 aa2.91□□□□□ -1.94
NIPBL-204ENST00000504430 TTTY12Q9BZ98 90 aa2.91□□□□□ -1.94
NIPBL-204ENST00000504430 LCE1AQ5T7P2 110 aa2.9□□□□□ -1.94
NIPBL-204ENST00000504430 V9GYH0 126 aa2.9□□□□□ -1.94
NIPBL-204ENST00000504430 RALGAPBQ86X10 1494 aa2.9□□□□□ -1.94
NIPBL-204ENST00000504430 GLI2P10070 1586 aa2.9□□□□□ -1.94
NIPBL-204ENST00000504430 DIP2AQ14689 1571 aa2.9□□□□□ -1.94
NIPBL-204ENST00000504430 SCN7AQ01118 1682 aa2.9□□□□□ -1.94
NIPBL-204ENST00000504430 SPAG11BQ08648 103 aa2.9□□□□□ -1.95
NIPBL-204ENST00000504430 SPAG11AQ6PDA7 123 aa2.9□□□□□ -1.95
NIPBL-204ENST00000504430 ZNF236Q9UL36 1845 aa2.9□□□□□ -1.95
NIPBL-204ENST00000504430 CLASP1Q7Z460 1538 aa2.9□□□□□ -1.95
NIPBL-204ENST00000504430 LEPROTL1O95214 131 aa2.89□□□□□ -1.95
NIPBL-204ENST00000504430 RGPD8O14715 1765 aaPredicted RBP2.89□□□□□ -1.95
NIPBL-204ENST00000504430 RGPD5Q99666 1765 aa2.89□□□□□ -1.95
NIPBL-204ENST00000504430 RGPD1P0DJD0 1748 aa2.89□□□□□ -1.95
NIPBL-204ENST00000504430 IGLV3-32A0A0A0MS00 114 aa2.89□□□□□ -1.95
NIPBL-204ENST00000504430 HCRTO43612 131 aa2.89□□□□□ -1.95
NIPBL-204ENST00000504430 DMAC1Q96GE9 116 aa2.89□□□□□ -1.95
NIPBL-204ENST00000504430 ORMDL1Q9P0S3 153 aa2.89□□□□□ -1.95
NIPBL-204ENST00000504430 LAMB2P55268 1798 aa2.89□□□□□ -1.95
NIPBL-204ENST00000504430 CDC42BPAQ5VT25 1732 aa2.89□□□□□ -1.95
NIPBL-204ENST00000504430 ABCC2Q92887 1545 aa2.89□□□□□ -1.95
NIPBL-204ENST00000504430 PSORS1C2Q9UIG4 136 aa2.89□□□□□ -1.95
NIPBL-204ENST00000504430 PLXNC1O60486 1568 aa2.89□□□□□ -1.95
NIPBL-204ENST00000504430 CEBPZOSA8MTT3 80 aa2.88□□□□□ -1.95
NIPBL-204ENST00000504430 DNAL4O96015 105 aa2.88□□□□□ -1.95
NIPBL-204ENST00000504430 IGLV3-19P01714 112 aa2.88□□□□□ -1.95
NIPBL-204ENST00000504430 TVP23CQ96ET8 276 aa2.88□□□□□ -1.95
NIPBL-204ENST00000504430 ABCC1P33527 1531 aa2.88□□□□□ -1.95
NIPBL-204ENST00000504430 UBR3Q6ZT12 1888 aa2.88□□□□□ -1.95
NIPBL-204ENST00000504430 ICE1Q9Y2F5 2266 aa2.88□□□□□ -1.95
NIPBL-204ENST00000504430 ARMS2P0C7Q2 107 aa2.88□□□□□ -1.95
NIPBL-204ENST00000504430 MRC1P22897 1456 aa2.88□□□□□ -1.95
NIPBL-204ENST00000504430 SLIT2O94813 1529 aa2.88□□□□□ -1.95
NIPBL-204ENST00000504430 XRN1Q8IZH2 1706 aaKnown RBP2.88□□□□□ -1.95
NIPBL-204ENST00000504430 SMIM11AP58511 58 aa2.88□□□□□ -1.95
NIPBL-204ENST00000504430 DEFB121Q5J5C9 76 aa2.88□□□□□ -1.95
NIPBL-204ENST00000504430 Q8N9L7 120 aa2.88□□□□□ -1.95
NIPBL-204ENST00000504430 NRXN2Q9P2S2 1712 aa2.87□□□□□ -1.95
NIPBL-204ENST00000504430 NCOA6Q14686 2063 aaPredicted RBP2.87□□□□□ -1.95
NIPBL-204ENST00000504430 A0A0J9YY99 117 aa2.87□□□□□ -1.95
NIPBL-204ENST00000504430 GNG13Q9P2W3 67 aa2.87□□□□□ -1.95
NIPBL-204ENST00000504430 KCPQ6ZWJ8 1503 aa2.87□□□□□ -1.95
NIPBL-204ENST00000504430 TNRC6BQ9UPQ9 1833 aaKnown RBP2.87□□□□□ -1.95
NIPBL-204ENST00000504430 COX7B2Q8TF08 81 aa2.87□□□□□ -1.95
NIPBL-204ENST00000504430 F5P12259 2224 aa2.87□□□□□ -1.95
NIPBL-204ENST00000504430 POLR1AO95602 1720 aaPredicted RBP2.87□□□□□ -1.95
NIPBL-204ENST00000504430 IQGAP2Q13576 1575 aa2.87□□□□□ -1.95
NIPBL-204ENST00000504430 A0A1B0GWA3 101 aa2.87□□□□□ -1.95
NIPBL-204ENST00000504430 A0A1W2PNN7 141 aa2.87□□□□□ -1.95
NIPBL-204ENST00000504430 COX6CP09669 75 aa2.87□□□□□ -1.95
NIPBL-204ENST00000504430 PLGLAQ15195 96 aa2.87□□□□□ -1.95
NIPBL-204ENST00000504430 SPINK14Q6IE38 97 aa2.87□□□□□ -1.95
NIPBL-204ENST00000504430 SAMD9Q5K651 1589 aa2.86□□□□□ -1.95
NIPBL-204ENST00000504430 IGKV2D-24A0A075B6R9 120 aa2.86□□□□□ -1.95
NIPBL-204ENST00000504430 CADP27708 2225 aa2.86□□□□□ -1.95
NIPBL-204ENST00000504430 CCL3L1P16619 93 aa2.86□□□□□ -1.95
NIPBL-204ENST00000504430 PDE6GP18545 87 aa2.86□□□□□ -1.95
NIPBL-204ENST00000504430 SSBP1Q04837 148 aaKnown RBP2.86□□□□□ -1.95
NIPBL-204ENST00000504430 KRTAP17-1Q9BYP8 105 aa2.86□□□□□ -1.95
NIPBL-204ENST00000504430 NBDYA0A0U1RRE5 68 aa2.85□□□□□ -1.95
NIPBL-204ENST00000504430 D6R8Y8 96 aa2.85□□□□□ -1.95
NIPBL-204ENST00000504430 LY6EQ16553 131 aa2.85□□□□□ -1.95
NIPBL-204ENST00000504430 MUSTN1Q8IVN3 82 aa2.85□□□□□ -1.95
NIPBL-204ENST00000504430 UBE2D4Q9Y2X8 147 aa2.85□□□□□ -1.95
NIPBL-204ENST00000504430 A0A0D9SFI3 127 aa2.85□□□□□ -1.95
NIPBL-204ENST00000504430 IGHV3-30P01768 117 aa2.85□□□□□ -1.95
NIPBL-204ENST00000504430 IGHV3-30-5P0DP03 117 aa2.85□□□□□ -1.95
NIPBL-204ENST00000504430 PTPN23Q9H3S7 1636 aa2.85□□□□□ -1.95
NIPBL-204ENST00000504430 ANKRD36A6QL64 1941 aa2.85□□□□□ -1.95
NIPBL-204ENST00000504430 C1orf167Q5SNV9 1468 aa2.85□□□□□ -1.95
NIPBL-204ENST00000504430 M0R135 149 aa2.85□□□□□ -1.95
NIPBL-204ENST00000504430 ABCA9Q8IUA7 1624 aa2.85□□□□□ -1.95
NIPBL-204ENST00000504430 CACNA1GO43497 2377 aa2.85□□□□□ -1.95
NIPBL-204ENST00000504430 PREX1Q8TCU6 1659 aa2.85□□□□□ -1.95
NIPBL-204ENST00000504430 CLTCL1P53675 1640 aa2.84□□□□□ -1.95
NIPBL-204ENST00000504430 A0A1B0GUL6 1792 aa2.84□□□□□ -1.95
NIPBL-204ENST00000504430 A0A087WTM6 91 aa2.84□□□□□ -1.95
NIPBL-204ENST00000504430 IGKV2-29A2NJV5 120 aaPredicted RBP2.84□□□□□ -1.95
NIPBL-204ENST00000504430 BCE1O60756 84 aa2.84□□□□□ -1.95
NIPBL-204ENST00000504430 BAGE3Q86Y29 109 aa2.84□□□□□ -1.95
NIPBL-204ENST00000504430 BAGE2Q86Y30 109 aa2.84□□□□□ -1.95
NIPBL-204ENST00000504430 LAMC1P11047 1609 aa2.84□□□□□ -1.96
NIPBL-204ENST00000504430 TRBV6-4A0A1B0GX49 114 aa2.84□□□□□ -1.96
NIPBL-204ENST00000504430 RNASE3P12724 160 aaKnown RBP2.84□□□□□ -1.96
NIPBL-204ENST00000504430 TOMM5Q8N4H5 51 aa2.83□□□□□ -1.96
NIPBL-204ENST00000504430 ZNF831Q5JPB2 1677 aa2.83□□□□□ -1.96
NIPBL-204ENST00000504430 TRGV4A0A0C4DH28 118 aa2.83□□□□□ -1.96
NIPBL-204ENST00000504430 JMJD7-PLA2G4BH0Y9G9 81 aa2.83□□□□□ -1.96
NIPBL-204ENST00000504430 ASXL3Q9C0F0 2248 aa2.83□□□□□ -1.96
NIPBL-204ENST00000504430 CDC42BPGQ6DT37 1551 aa2.83□□□□□ -1.96
NIPBL-204ENST00000504430 RREB1Q92766 1687 aa2.83□□□□□ -1.96
NIPBL-204ENST00000504430 LRRC9Q6ZRR7 1453 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms