RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 LCE6AA0A183 80 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 D6R8Y8 96 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 C5orf67F2Z3F1 127 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 H3BQ85 93 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 CHKB-CPT1BH3BT56 60 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 PSCAO43653 123 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGLV1-51P01701 117 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 ARL14EPLP0DKL9 152 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 IL9P15248 144 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 RPL28P46779 137 aaKnown RBP1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 DEFB114Q30KQ6 69 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 FAM229BQ4G0N7 80 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 C10orf113Q5VZT2 155 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 LYPD2Q6UXB3 125 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 C2orf66Q6UXQ4 117 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 Q6ZR03 302 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 ZNF833PQ6ZTB9 187 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 RPS27LQ71UM5 84 aaKnown RBP1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 CAMK2N1Q7Z7J9 78 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 MUSTN1Q8IVN3 82 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 Q8N814 137 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 Q8N9L7 120 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 SPANXA2-OT1Q8N9U9 137 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 SPTSSBQ8NFR3 76 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 KLF14Q8TD94 323 aaPredicted RBP1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 CHCHD7Q9BUK0 85 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 SND1-IT1Q9HBX3 110 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 PROK2Q9HC23 129 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 LHFPL6Q9Y693 200 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 DOCK9Q9BZ29 2069 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 PIKFYVEQ9Y2I7 2098 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 LTBP1Q14766 1721 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGLV10-54A0A075B6I4 117 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 TRBV6-6A0A0A6YYG2 114 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 TRAV40A0A0B4J280 105 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGHV5-10-1A0A0J9YXX1 117 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 PINLYPA6NC86 204 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 A6NED7 52 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGIPA6NJ69 53 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 M0R135 149 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 HMGN4O00479 90 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 BPY2O14599 106 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 LY6HO94772 140 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGKV1-39P01597 117 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGHV3-23P01764 117 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGKV1D-39P04432 117 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 CTSGP08311 255 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 ROMO1P60602 79 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 EGFEM1PQ0D2K5 195 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 MOBPQ13875 183 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 FXYD3Q14802 87 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 LINC01590Q5TEZ4 76 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 Q8NDZ9 215 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 CNFNQ9BYD5 112 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 LENEPQ9Y5L5 61 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 R4GMQ9 66 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 THADAQ6YHU6 1953 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 SHROOM3Q8TF72 1996 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 PLXNB3Q9ULL4 1909 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 COL4A1P02462 1669 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 POLEQ07864 2286 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 DOCK11Q5JSL3 2073 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 C2orf16Q68DN1 1984 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 KIAA1549Q9HCM3 1950 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 TNRC6BQ9UPQ9 1833 aaKnown RBP1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGLV8-61A0A075B6I0 122 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 A0A087WVE0 104 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGHV3-73A0A0B4J1V6 119 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGHV3-66A0A0C4DH42 116 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 LOC730098B7Z3J9 87 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 H0YGX0 51 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 SPINK4O60575 86 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 CRPP02741 224 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 CISD3P0C7P0 127 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 BAALC-AS2P0C853 105 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 P0C879 139 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 NREPQ16612 68 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 SPANXN5Q5MJ07 72 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 C10orf128Q5T292 105 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 C20orf203Q8NBC4 194 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 C1orf64Q8NEQ6 169 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 ARHGAP5-AS1Q96IT6 56 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 TTTY13Q9BZ97 58 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 FGF23Q9GZV9 251 aaPredicted RBP1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 C8orf17Q9NRJ1 99 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 LINC00846Q9NV44 126 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 S4R3C0 116 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 MUC22E2RYF6 1773 aaPredicted RBP1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 COL4A2P08572 1712 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 SCN3AQ9NY46 2000 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGHV3-49A0A0A0MS15 119 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGHV3-15A0A0B4J1V0 119 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 TRAV12-3A0A0B4J271 114 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGKV3D-7A0A0C4DH55 119 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 TRBV10-1A0A0K0K1A3 114 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 TRBV6-5A0A0K0K1A5 114 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 CPSF4LA6NMK7 179 aaKnown RBP1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 H3BPC8 53 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 I3L3M4 83 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 M0R3E3 92 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms