RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 LCE6AA0A183 80 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 D6R8Y8 96 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 C5orf67F2Z3F1 127 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 H3BQ85 93 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 CHKB-CPT1BH3BT56 60 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 PSCAO43653 123 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGLV1-51P01701 117 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 ARL14EPLP0DKL9 152 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 IL9P15248 144 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 RPL28P46779 137 aaKnown RBP1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 DEFB114Q30KQ6 69 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 FAM229BQ4G0N7 80 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 C10orf113Q5VZT2 155 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 LYPD2Q6UXB3 125 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 C2orf66Q6UXQ4 117 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 Q6ZR03 302 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 ZNF833PQ6ZTB9 187 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 RPS27LQ71UM5 84 aaKnown RBP1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 CAMK2N1Q7Z7J9 78 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 MUSTN1Q8IVN3 82 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 Q8N814 137 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 Q8N9L7 120 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 SPANXA2-OT1Q8N9U9 137 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 SPTSSBQ8NFR3 76 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 KLF14Q8TD94 323 aaPredicted RBP1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 CHCHD7Q9BUK0 85 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 SND1-IT1Q9HBX3 110 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 PROK2Q9HC23 129 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 LHFPL6Q9Y693 200 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 DOCK9Q9BZ29 2069 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 PIKFYVEQ9Y2I7 2098 aa1.27□□□□□ -2.21
HMGB3P17-201ENST00000504195 LTBP1Q14766 1721 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGLV10-54A0A075B6I4 117 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 TRBV6-6A0A0A6YYG2 114 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 TRAV40A0A0B4J280 105 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGHV5-10-1A0A0J9YXX1 117 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 PINLYPA6NC86 204 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 A6NED7 52 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGIPA6NJ69 53 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 M0R135 149 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 HMGN4O00479 90 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 BPY2O14599 106 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 LY6HO94772 140 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGKV1-39P01597 117 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGHV3-23P01764 117 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGKV1D-39P04432 117 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 CTSGP08311 255 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 ROMO1P60602 79 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 EGFEM1PQ0D2K5 195 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 MOBPQ13875 183 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 FXYD3Q14802 87 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 LINC01590Q5TEZ4 76 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 Q8NDZ9 215 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 CNFNQ9BYD5 112 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 LENEPQ9Y5L5 61 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 R4GMQ9 66 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 THADAQ6YHU6 1953 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 SHROOM3Q8TF72 1996 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 PLXNB3Q9ULL4 1909 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 COL4A1P02462 1669 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 POLEQ07864 2286 aa1.26□□□□□ -2.21
HMGB3P17-201ENST00000504195 DOCK11Q5JSL3 2073 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 C2orf16Q68DN1 1984 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 KIAA1549Q9HCM3 1950 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 TNRC6BQ9UPQ9 1833 aaKnown RBP1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGLV8-61A0A075B6I0 122 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 A0A087WVE0 104 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGHV3-73A0A0B4J1V6 119 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGHV3-66A0A0C4DH42 116 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 LOC730098B7Z3J9 87 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 H0YGX0 51 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 SPINK4O60575 86 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 CRPP02741 224 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 CISD3P0C7P0 127 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 BAALC-AS2P0C853 105 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 P0C879 139 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 NREPQ16612 68 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 SPANXN5Q5MJ07 72 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 C10orf128Q5T292 105 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 C20orf203Q8NBC4 194 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 C1orf64Q8NEQ6 169 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 ARHGAP5-AS1Q96IT6 56 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 TTTY13Q9BZ97 58 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 FGF23Q9GZV9 251 aaPredicted RBP1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 C8orf17Q9NRJ1 99 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 LINC00846Q9NV44 126 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 S4R3C0 116 aa1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 MUC22E2RYF6 1773 aaPredicted RBP1.25□□□□□ -2.21
HMGB3P17-201ENST00000504195 COL4A2P08572 1712 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 SCN3AQ9NY46 2000 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGHV3-49A0A0A0MS15 119 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGHV3-15A0A0B4J1V0 119 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 TRAV12-3A0A0B4J271 114 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 IGKV3D-7A0A0C4DH55 119 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 TRBV10-1A0A0K0K1A3 114 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 TRBV6-5A0A0K0K1A5 114 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 CPSF4LA6NMK7 179 aaKnown RBP1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 H3BPC8 53 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 I3L3M4 83 aa1.24□□□□□ -2.21
HMGB3P17-201ENST00000504195 M0R3E3 92 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms