RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 IGLC7A0M8Q6 106 aa0.85□□□□□ -2.27
HMGB1P35-201ENST00000503360 SYS1-DBNDD2H3BUS1 97 aa0.85□□□□□ -2.27
HMGB1P35-201ENST00000503360 M0R135 149 aa0.85□□□□□ -2.27
HMGB1P35-201ENST00000503360 UQCR11O14957 56 aa0.85□□□□□ -2.27
HMGB1P35-201ENST00000503360 BCE1O60756 84 aa0.85□□□□□ -2.27
HMGB1P35-201ENST00000503360 CYB5AP00167 134 aa0.85□□□□□ -2.27
HMGB1P35-201ENST00000503360 PRB1P04280 392 aa0.85□□□□□ -2.27
HMGB1P35-201ENST00000503360 SMIM11AP58511 58 aa0.85□□□□□ -2.27
HMGB1P35-201ENST00000503360 PMCHL1Q16048 86 aa0.85□□□□□ -2.27
HMGB1P35-201ENST00000503360 VMO1Q7Z5L0 202 aa0.85□□□□□ -2.27
HMGB1P35-201ENST00000503360 UBR1Q8IWV7 1749 aa0.85□□□□□ -2.27
HMGB1P35-201ENST00000503360 S100A16Q96FQ6 103 aaKnown RBP0.85□□□□□ -2.27
HMGB1P35-201ENST00000503360 Q96NJ1 140 aa0.85□□□□□ -2.27
HMGB1P35-201ENST00000503360 S100A13Q99584 98 aa0.85□□□□□ -2.27
HMGB1P35-201ENST00000503360 C20orf78Q9BR46 151 aa0.85□□□□□ -2.27
HMGB1P35-201ENST00000503360 UACAQ9BZF9 1416 aa0.85□□□□□ -2.27
HMGB1P35-201ENST00000503360 BPESC1Q9GZL8 116 aa0.85□□□□□ -2.27
HMGB1P35-201ENST00000503360 NXT2Q9NPJ8 142 aaKnown RBP0.85□□□□□ -2.27
HMGB1P35-201ENST00000503360 ASCC3Q8N3C0 2202 aaKnown RBP0.85□□□□□ -2.27
HMGB1P35-201ENST00000503360 DOCK2Q92608 1830 aa0.85□□□□□ -2.27
HMGB1P35-201ENST00000503360 COL4A1P02462 1669 aa0.84□□□□□ -2.27
HMGB1P35-201ENST00000503360 DIP2BQ9P265 1576 aa0.84□□□□□ -2.27
HMGB1P35-201ENST00000503360 ABCA4P78363 2273 aa0.84□□□□□ -2.27
HMGB1P35-201ENST00000503360 TRBV25-1A0A075B6N4 114 aa0.84□□□□□ -2.27
HMGB1P35-201ENST00000503360 TRGV1A0A0A0MS02 117 aa0.84□□□□□ -2.27
HMGB1P35-201ENST00000503360 A0A0G2JND7 137 aa0.84□□□□□ -2.27
HMGB1P35-201ENST00000503360 CTXND1A0A1B0GTU2 59 aa0.84□□□□□ -2.27
HMGB1P35-201ENST00000503360 H7BZZ5 65 aa0.84□□□□□ -2.27
HMGB1P35-201ENST00000503360 UQCRHP07919 91 aa0.84□□□□□ -2.27
HMGB1P35-201ENST00000503360 SAA2P0DJI9 122 aaPredicted RBP0.84□□□□□ -2.27
HMGB1P35-201ENST00000503360 ACYP2P14621 99 aa0.84□□□□□ -2.27
HMGB1P35-201ENST00000503360 BAGE2Q86Y30 109 aa0.84□□□□□ -2.27
HMGB1P35-201ENST00000503360 SMIM4Q8WVI0 70 aa0.84□□□□□ -2.27
HMGB1P35-201ENST00000503360 LINC01558Q9Y6Z2 57 aa0.84□□□□□ -2.27
HMGB1P35-201ENST00000503360 ARL2-SNX15V9GYD0 113 aa0.84□□□□□ -2.27
HMGB1P35-201ENST00000503360 MRC1P22897 1456 aa0.84□□□□□ -2.28
HMGB1P35-201ENST00000503360 TECTAO75443 2155 aa0.84□□□□□ -2.28
HMGB1P35-201ENST00000503360 E9PCH4 1651 aa0.84□□□□□ -2.28
HMGB1P35-201ENST00000503360 CDK13Q14004 1512 aaKnown RBP0.84□□□□□ -2.28
HMGB1P35-201ENST00000503360 PEAK1Q9H792 1746 aa0.84□□□□□ -2.28
HMGB1P35-201ENST00000503360 A0A096LNT2 108 aa0.83□□□□□ -2.28
HMGB1P35-201ENST00000503360 F2Z2F3 143 aa0.83□□□□□ -2.28
HMGB1P35-201ENST00000503360 ANGP03950 147 aaKnown RBP0.83□□□□□ -2.28
HMGB1P35-201ENST00000503360 NMBP08949 121 aa0.83□□□□□ -2.28
HMGB1P35-201ENST00000503360 COX17Q14061 63 aa0.83□□□□□ -2.28
HMGB1P35-201ENST00000503360 KRTAP21-3Q3LHN1 58 aa0.83□□□□□ -2.28
HMGB1P35-201ENST00000503360 SFTA2Q6UW10 78 aa0.83□□□□□ -2.28
HMGB1P35-201ENST00000503360 ZNF720Q7Z2F6 126 aa0.83□□□□□ -2.28
HMGB1P35-201ENST00000503360 PLAC4Q8WY50 150 aa0.83□□□□□ -2.28
HMGB1P35-201ENST00000503360 ESPL1Q14674 2120 aa0.83□□□□□ -2.28
HMGB1P35-201ENST00000503360 LRRIQ1Q96JM4 1722 aa0.83□□□□□ -2.28
HMGB1P35-201ENST00000503360 LOC285556D6RIA3 1793 aa0.83□□□□□ -2.28
HMGB1P35-201ENST00000503360 RGPD4Q7Z3J3 1758 aa0.83□□□□□ -2.28
HMGB1P35-201ENST00000503360 MAP2P11137 1827 aaKnown RBP0.82□□□□□ -2.28
HMGB1P35-201ENST00000503360 ARFGEF1Q9Y6D6 1849 aa0.82□□□□□ -2.28
HMGB1P35-201ENST00000503360 TOP2BQ02880 1626 aa0.82□□□□□ -2.28
HMGB1P35-201ENST00000503360 MYO3AQ8NEV4 1616 aa0.82□□□□□ -2.28
HMGB1P35-201ENST00000503360 DLG5Q8TDM6 1919 aa0.82□□□□□ -2.28
HMGB1P35-201ENST00000503360 FANCAO15360 1455 aa0.82□□□□□ -2.28
HMGB1P35-201ENST00000503360 ATP10BO94823 1461 aa0.82□□□□□ -2.28
HMGB1P35-201ENST00000503360 POLA1P09884 1462 aaPredicted RBP0.82□□□□□ -2.28
HMGB1P35-201ENST00000503360 TRAV1-2A0A0B4J238 106 aa0.82□□□□□ -2.28
HMGB1P35-201ENST00000503360 ZNF815PA8K554 130 aa0.82□□□□□ -2.28
HMGB1P35-201ENST00000503360 H3BQF6 201 aa0.82□□□□□ -2.28
HMGB1P35-201ENST00000503360 MGPP08493 103 aa0.82□□□□□ -2.28
HMGB1P35-201ENST00000503360 LYNX1P0DP58 116 aa0.82□□□□□ -2.28
HMGB1P35-201ENST00000503360 FXYD6P3P58550 94 aa0.82□□□□□ -2.28
HMGB1P35-201ENST00000503360 HMGN3Q15651 99 aa0.82□□□□□ -2.28
HMGB1P35-201ENST00000503360 TDRG1Q3Y452 100 aa0.82□□□□□ -2.28
HMGB1P35-201ENST00000503360 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.82□□□□□ -2.28
HMGB1P35-201ENST00000503360 SMIM11BQ8TCY0 68 aa0.82□□□□□ -2.28
HMGB1P35-201ENST00000503360 EPRSP07814 1512 aaKnown RBP0.82□□□□□ -2.28
HMGB1P35-201ENST00000503360 HMGXB3Q12766 1538 aa0.82□□□□□ -2.28
HMGB1P35-201ENST00000503360 KDM5DQ9BY66 1539 aa0.82□□□□□ -2.28
HMGB1P35-201ENST00000503360 DNMBPQ6XZF7 1577 aa0.82□□□□□ -2.28
HMGB1P35-201ENST00000503360 PSME4Q14997 1843 aa0.82□□□□□ -2.28
HMGB1P35-201ENST00000503360 MAP3K4Q9Y6R4 1608 aa0.82□□□□□ -2.28
HMGB1P35-201ENST00000503360 TCHHQ07283 1943 aa0.81□□□□□ -2.28
HMGB1P35-201ENST00000503360 EDC4Q6P2E9 1401 aaKnown RBP0.81□□□□□ -2.28
HMGB1P35-201ENST00000503360 EHBP1L1Q8N3D4 1523 aa0.81□□□□□ -2.28
HMGB1P35-201ENST00000503360 A0A1B0GWA3 101 aa0.81□□□□□ -2.28
HMGB1P35-201ENST00000503360 ZNF137PP52743 207 aa0.81□□□□□ -2.28
HMGB1P35-201ENST00000503360 SNRPFP62306 86 aaKnown RBP0.81□□□□□ -2.28
HMGB1P35-201ENST00000503360 ADIRFQ15847 76 aa0.81□□□□□ -2.28
HMGB1P35-201ENST00000503360 PSMG4Q5JS54 123 aa0.81□□□□□ -2.28
HMGB1P35-201ENST00000503360 CFAP126Q5VTH2 177 aa0.81□□□□□ -2.28
HMGB1P35-201ENST00000503360 ALKAL2Q6UX46 152 aa0.81□□□□□ -2.28
HMGB1P35-201ENST00000503360 FAM223AQ8IWN6 122 aa0.81□□□□□ -2.28
HMGB1P35-201ENST00000503360 HIGD1BQ9P298 99 aa0.81□□□□□ -2.28
HMGB1P35-201ENST00000503360 UNC13BO14795 1591 aa0.81□□□□□ -2.28
HMGB1P35-201ENST00000503360 CLTCQ00610 1675 aaKnown RBP0.81□□□□□ -2.28
HMGB1P35-201ENST00000503360 SCN7AQ01118 1682 aa0.81□□□□□ -2.28
HMGB1P35-201ENST00000503360 RGPD3A6NKT7 1758 aaPredicted RBP0.8□□□□□ -2.28
HMGB1P35-201ENST00000503360 CCDC88BA6NC98 1476 aa0.8□□□□□ -2.28
HMGB1P35-201ENST00000503360 ERVK-7P63135 1459 aa0.8□□□□□ -2.28
HMGB1P35-201ENST00000503360 IQSEC2Q5JU85 1478 aa0.8□□□□□ -2.28
HMGB1P35-201ENST00000503360 NLRP1Q9C000 1473 aa0.8□□□□□ -2.28
HMGB1P35-201ENST00000503360 ZMYM4Q5VZL5 1548 aa0.8□□□□□ -2.28
HMGB1P35-201ENST00000503360 GVQW2A0A096LPI5 108 aaPredicted RBP0.8□□□□□ -2.28
HMGB1P35-201ENST00000503360 KANTRA0A1W2PQU2 76 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms