RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 LINC00643Q86TS7 51 aa5.43□□□□□ -1.54
PDGFC-203ENST00000502773 XCL2Q9UBD3 114 aa5.43□□□□□ -1.54
PDGFC-203ENST00000502773 NCOR2Q9Y618 2525 aa5.43□□□□□ -1.54
PDGFC-203ENST00000502773 TIMM17BO60830 172 aa5.43□□□□□ -1.54
PDGFC-203ENST00000502773 DEFB136Q30KP8 78 aa5.43□□□□□ -1.54
PDGFC-203ENST00000502773 LINC01006Q8NI28 216 aa5.43□□□□□ -1.54
PDGFC-203ENST00000502773 LINC00526Q96FQ7 95 aa5.43□□□□□ -1.54
PDGFC-203ENST00000502773 TSHBP01222 138 aa5.42□□□□□ -1.54
PDGFC-203ENST00000502773 C10orf99Q6UWK7 81 aa5.42□□□□□ -1.54
PDGFC-203ENST00000502773 IL17DQ8TAD2 202 aa5.42□□□□□ -1.54
PDGFC-203ENST00000502773 IGHV3OR16-12A0A075B7B8 117 aa5.42□□□□□ -1.54
PDGFC-203ENST00000502773 TRBV10-2A0A0K0K1G8 114 aa5.42□□□□□ -1.54
PDGFC-203ENST00000502773 NHLRC4P0CG21 123 aaPredicted RBP5.42□□□□□ -1.54
PDGFC-203ENST00000502773 SLC25A29Q8N8R3 303 aa5.42□□□□□ -1.54
PDGFC-203ENST00000502773 FAM240AA0A1B0GVK7 77 aa5.42□□□□□ -1.54
PDGFC-203ENST00000502773 TRBV6-4A0A1B0GX49 114 aa5.42□□□□□ -1.54
PDGFC-203ENST00000502773 KRTAP10-9P60411 292 aa5.42□□□□□ -1.54
PDGFC-203ENST00000502773 TMEM223A0PJW6 202 aa5.41□□□□□ -1.54
PDGFC-203ENST00000502773 PRB2P02812 416 aaPredicted RBP5.41□□□□□ -1.54
PDGFC-203ENST00000502773 DEFB1P60022 68 aa5.41□□□□□ -1.54
PDGFC-203ENST00000502773 SDIM1Q6ZPB5 146 aa5.41□□□□□ -1.54
PDGFC-203ENST00000502773 SPTSSBQ8NFR3 76 aa5.41□□□□□ -1.54
PDGFC-203ENST00000502773 A0A0B4J2C4 111 aa5.41□□□□□ -1.54
PDGFC-203ENST00000502773 IGHV1-58A0A0C4DH39 117 aa5.41□□□□□ -1.54
PDGFC-203ENST00000502773 GAS8-AS1O95177 125 aa5.41□□□□□ -1.54
PDGFC-203ENST00000502773 IGLV1-51P01701 117 aa5.41□□□□□ -1.54
PDGFC-203ENST00000502773 IGLV4-3A0A075B6K6 122 aa5.41□□□□□ -1.54
PDGFC-203ENST00000502773 WDFY3Q8IZQ1 3526 aa5.41□□□□□ -1.54
PDGFC-203ENST00000502773 MAPKAPK5-AS1Q8N8E1 139 aa5.41□□□□□ -1.54
PDGFC-203ENST00000502773 ZNRF2Q8NHG8 242 aa5.41□□□□□ -1.54
PDGFC-203ENST00000502773 AMELXQ99217 191 aa5.41□□□□□ -1.54
PDGFC-203ENST00000502773 OVOL2Q9BRP0 275 aa5.4□□□□□ -1.54
PDGFC-203ENST00000502773 GHRHP01286 108 aa5.4□□□□□ -1.55
PDGFC-203ENST00000502773 ACACBO00763 2458 aa5.4□□□□□ -1.55
PDGFC-203ENST00000502773 RPL39P62891 51 aaKnown RBP5.39□□□□□ -1.55
PDGFC-203ENST00000502773 CLEC2BQ92478 149 aa5.39□□□□□ -1.55
PDGFC-203ENST00000502773 NDUFA12Q9UI09 145 aa5.39□□□□□ -1.55
PDGFC-203ENST00000502773 C2CD3Q4AC94 2353 aa5.39□□□□□ -1.55
PDGFC-203ENST00000502773 TRAV23DV6A0A075B6W5 121 aa5.39□□□□□ -1.55
PDGFC-203ENST00000502773 NDUFC2-KCTD14E9PQ53 114 aa5.39□□□□□ -1.55
PDGFC-203ENST00000502773 WIPF1O43516 503 aa5.39□□□□□ -1.55
PDGFC-203ENST00000502773 ODF3L2Q3SX64 289 aa5.39□□□□□ -1.55
PDGFC-203ENST00000502773 SPTAN1Q13813 2472 aaKnown RBP5.39□□□□□ -1.55
PDGFC-203ENST00000502773 PMAIP1Q13794 54 aa5.39□□□□□ -1.55
PDGFC-203ENST00000502773 AKAP13Q12802 2813 aa5.39□□□□□ -1.55
PDGFC-203ENST00000502773 IGHV3-73A0A0B4J1V6 119 aa5.38□□□□□ -1.55
PDGFC-203ENST00000502773 A0A0J9YY99 117 aa5.38□□□□□ -1.55
PDGFC-203ENST00000502773 LYRM9A8MSI8 78 aa5.38□□□□□ -1.55
PDGFC-203ENST00000502773 ZNF22P17026 224 aaPredicted RBP5.38□□□□□ -1.55
PDGFC-203ENST00000502773 SERP2Q8N6R1 65 aa5.38□□□□□ -1.55
PDGFC-203ENST00000502773 CACNA1AO00555 2505 aa5.38□□□□□ -1.55
PDGFC-203ENST00000502773 IGLV4-69A0A075B6H9 119 aa5.38□□□□□ -1.55
PDGFC-203ENST00000502773 HAMPP81172 84 aa5.38□□□□□ -1.55
PDGFC-203ENST00000502773 C11orf72Q8NBR9 251 aa5.38□□□□□ -1.55
PDGFC-203ENST00000502773 BAALC-AS2P0C853 105 aa5.38□□□□□ -1.55
PDGFC-203ENST00000502773 KRTAP1-3Q8IUG1 177 aa5.38□□□□□ -1.55
PDGFC-203ENST00000502773 SPTBN4Q9H254 2564 aa5.38□□□□□ -1.55
PDGFC-203ENST00000502773 A0A0J9YXV3 536 aa5.37□□□□□ -1.55
PDGFC-203ENST00000502773 H3BT86 120 aa5.37□□□□□ -1.55
PDGFC-203ENST00000502773 DPH3Q96FX2 82 aa5.37□□□□□ -1.55
PDGFC-203ENST00000502773 UBE2D4Q9Y2X8 147 aa5.37□□□□□ -1.55
PDGFC-203ENST00000502773 PKD1L2Q7Z442 2459 aa5.37□□□□□ -1.55
PDGFC-203ENST00000502773 SMIM26A0A096LP01 95 aa5.37□□□□□ -1.55
PDGFC-203ENST00000502773 CEMP1Q6PRD7 247 aaPredicted RBP5.37□□□□□ -1.55
PDGFC-203ENST00000502773 SOSTDC1Q6X4U4 206 aa5.37□□□□□ -1.55
PDGFC-203ENST00000502773 VSIG2Q96IQ7 327 aa5.37□□□□□ -1.55
PDGFC-203ENST00000502773 LINC00336Q6ZUF6 198 aa5.37□□□□□ -1.55
PDGFC-203ENST00000502773 IMUPQ9GZP8 106 aa5.37□□□□□ -1.55
PDGFC-203ENST00000502773 PROK1P58294 105 aa5.37□□□□□ -1.55
PDGFC-203ENST00000502773 RPS28P62857 69 aaKnown RBP5.37□□□□□ -1.55
PDGFC-203ENST00000502773 SS18Q15532 418 aa5.37□□□□□ -1.55
PDGFC-203ENST00000502773 C11orf44Q8N8P7 122 aa5.37□□□□□ -1.55
PDGFC-203ENST00000502773 NOP10Q9NPE3 64 aaKnown RBP5.37□□□□□ -1.55
PDGFC-203ENST00000502773 SPRY2O43597 315 aa5.36□□□□□ -1.55
PDGFC-203ENST00000502773 IGHV3-30-3P0DP02 117 aa5.36□□□□□ -1.55
PDGFC-203ENST00000502773 SMCPP49901 116 aaPredicted RBP5.36□□□□□ -1.55
PDGFC-203ENST00000502773 UBE2D1P51668 147 aa5.36□□□□□ -1.55
PDGFC-203ENST00000502773 MUSTN1Q8IVN3 82 aa5.36□□□□□ -1.55
PDGFC-203ENST00000502773 P0DMU3 169 aa5.36□□□□□ -1.55
PDGFC-203ENST00000502773 FAM231AP0DMU4 169 aa5.36□□□□□ -1.55
PDGFC-203ENST00000502773 FAM231CP0DMU5 169 aa5.36□□□□□ -1.55
PDGFC-203ENST00000502773 UBE2D3P61077 147 aa5.36□□□□□ -1.55
PDGFC-203ENST00000502773 UBE2D2P62837 147 aa5.36□□□□□ -1.55
PDGFC-203ENST00000502773 RPL18AQ02543 176 aaKnown RBP5.36□□□□□ -1.55
PDGFC-203ENST00000502773 C18orf65Q6ZTR6 163 aa5.36□□□□□ -1.55
PDGFC-203ENST00000502773 FAM19A3Q7Z5A8 133 aa5.36□□□□□ -1.55
PDGFC-203ENST00000502773 C1orf158Q8N1D5 194 aa5.36□□□□□ -1.55
PDGFC-203ENST00000502773 NDUFA1O15239 70 aa5.35□□□□□ -1.55
PDGFC-203ENST00000502773 LINC01561Q8N1V8 128 aa5.35□□□□□ -1.55
PDGFC-203ENST00000502773 PHLDA1Q8WV24 401 aaPredicted RBP5.35□□□□□ -1.55
PDGFC-203ENST00000502773 USP17L23D6RBM5 183 aa5.35□□□□□ -1.55
PDGFC-203ENST00000502773 IGHV3-30P01768 117 aa5.35□□□□□ -1.55
PDGFC-203ENST00000502773 IGHV3-30-5P0DP03 117 aa5.35□□□□□ -1.55
PDGFC-203ENST00000502773 MUC7Q8TAX7 377 aa5.35□□□□□ -1.55
PDGFC-203ENST00000502773 CHCHD7Q9BUK0 85 aa5.35□□□□□ -1.55
PDGFC-203ENST00000502773 UBL5Q9BZL1 73 aa5.35□□□□□ -1.55
PDGFC-203ENST00000502773 PRO0461Q9UI25 63 aa5.35□□□□□ -1.55
PDGFC-203ENST00000502773 ICOSQ9Y6W8 199 aa5.35□□□□□ -1.55
PDGFC-203ENST00000502773 MIAQ16674 131 aa5.35□□□□□ -1.55
PDGFC-203ENST00000502773 PRO0255Q9UI72 69 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms