RNA–Protein interactions for RNA: ENST00000498136.5

ABCF3-218, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-218ENST00000498136 TMEM136Q6ZRR5 245 aa10.9□□□□□ -0.66
ABCF3-218ENST00000498136 MRPL52Q86TS9 123 aaKnown RBP10.9□□□□□ -0.66
ABCF3-218ENST00000498136 CHCHD10Q8WYQ3 142 aaPredicted RBP10.9□□□□□ -0.66
ABCF3-218ENST00000498136 TMEM18Q96B42 140 aa10.9□□□□□ -0.66
ABCF3-218ENST00000498136 SMIM2Q9BVW6 85 aa10.9□□□□□ -0.66
ABCF3-218ENST00000498136 SEC11CQ9BY50 192 aa10.9□□□□□ -0.66
ABCF3-218ENST00000498136 hDV102S1A0JD36 115 aa10.89□□□□□ -0.67
ABCF3-218ENST00000498136 TCAPO15273 167 aa10.89□□□□□ -0.67
ABCF3-218ENST00000498136 SMR3BP02814 79 aaPredicted RBP10.89□□□□□ -0.67
ABCF3-218ENST00000498136 CLRN3Q8NCR9 226 aa10.89□□□□□ -0.67
ABCF3-218ENST00000498136 PRELID3AQ96N28 172 aa10.89□□□□□ -0.67
ABCF3-218ENST00000498136 EPM2AB3EWF7 344 aa10.88□□□□□ -0.67
ABCF3-218ENST00000498136 PHOX2AO14813 284 aa10.88□□□□□ -0.67
ABCF3-218ENST00000498136 RPL32P62910 135 aaKnown RBP10.88□□□□□ -0.67
ABCF3-218ENST00000498136 ZNF664Q8N3J9 261 aa10.88□□□□□ -0.67
ABCF3-218ENST00000498136 CDC42SE2Q9NRR3 84 aa10.88□□□□□ -0.67
ABCF3-218ENST00000498136 SS18Q15532 418 aa10.87□□□□□ -0.67
ABCF3-218ENST00000498136 CTDSP1Q9GZU7 261 aa10.87□□□□□ -0.67
ABCF3-218ENST00000498136 AP5S1Q9NUS5 200 aa10.87□□□□□ -0.67
ABCF3-218ENST00000498136 LINC00959A0A1B0GUT2 108 aa10.86□□□□□ -0.67
ABCF3-218ENST00000498136 XCL1P47992 114 aa10.86□□□□□ -0.67
ABCF3-218ENST00000498136 CFAP161Q6P656 301 aa10.86□□□□□ -0.67
ABCF3-218ENST00000498136 IMMP2LQ96T52 175 aa10.86□□□□□ -0.67
ABCF3-218ENST00000498136 UBE2D4Q9Y2X8 147 aa10.86□□□□□ -0.67
ABCF3-218ENST00000498136 CCL25O15444 150 aa10.85□□□□□ -0.67
ABCF3-218ENST00000498136 RAB5AP20339 215 aa10.85□□□□□ -0.67
ABCF3-218ENST00000498136 RNASE13Q5GAN3 156 aaKnown RBP10.85□□□□□ -0.67
ABCF3-218ENST00000498136 LOC389332A0A1B0GUA5 103 aa10.84□□□□□ -0.67
ABCF3-218ENST00000498136 S100PP25815 95 aa10.84□□□□□ -0.67
ABCF3-218ENST00000498136 RPL39P62891 51 aaKnown RBP10.84□□□□□ -0.67
ABCF3-218ENST00000498136 Q5VSD8 79 aa10.84□□□□□ -0.67
ABCF3-218ENST00000498136 Q6ZSA8 131 aa10.84□□□□□ -0.67
ABCF3-218ENST00000498136 MAP1LC3AQ9H492 121 aa10.84□□□□□ -0.67
ABCF3-218ENST00000498136 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.83□□□□□ -0.68
ABCF3-218ENST00000498136 HIGD2BQ4VC39 106 aa10.83□□□□□ -0.68
ABCF3-218ENST00000498136 C9orf163Q8N9P6 203 aa10.83□□□□□ -0.68
ABCF3-218ENST00000498136 LAMTOR2Q9Y2Q5 125 aa10.83□□□□□ -0.68
ABCF3-218ENST00000498136 CSDC2Q9Y534 153 aaKnown RBP10.83□□□□□ -0.68
ABCF3-218ENST00000498136 FAM229AH3BQW9 127 aa10.82□□□□□ -0.68
ABCF3-218ENST00000498136 FOXI1Q12951 378 aa10.82□□□□□ -0.68
ABCF3-218ENST00000498136 Q6ZUT4 128 aa10.82□□□□□ -0.68
ABCF3-218ENST00000498136 C15orf56Q8N910 161 aa10.82□□□□□ -0.68
ABCF3-218ENST00000498136 TIMM21Q9BVV7 248 aa10.82□□□□□ -0.68
ABCF3-218ENST00000498136 TRAV9-1A0A075B6T8 112 aa10.81□□□□□ -0.68
ABCF3-218ENST00000498136 TRAV13-1A0A0B4J241 112 aa10.81□□□□□ -0.68
ABCF3-218ENST00000498136 SCXQ7RTU7 201 aa10.81□□□□□ -0.68
ABCF3-218ENST00000498136 RPS10P5Q9NQ39 176 aa10.81□□□□□ -0.68
ABCF3-218ENST00000498136 PCLOQ9Y6V0 5065 aa10.81□□□□□ -0.68
ABCF3-218ENST00000498136 C1orf196B1AJZ1 125 aa10.8□□□□□ -0.68
ABCF3-218ENST00000498136 CNBPP62633 177 aaKnown RBP10.8□□□□□ -0.68
ABCF3-218ENST00000498136 CD164L2Q6UWJ8 174 aa10.8□□□□□ -0.68
ABCF3-218ENST00000498136 DNAH8Q96JB1 4490 aa10.79□□□□□ -0.68
ABCF3-218ENST00000498136 RHEBQ15382 184 aa10.79□□□□□ -0.68
ABCF3-218ENST00000498136 C10orf91Q5T1B1 145 aa10.79□□□□□ -0.68
ABCF3-218ENST00000498136 CHAC1Q9BUX1 264 aa10.79□□□□□ -0.68
ABCF3-218ENST00000498136 SPANXA1Q9NS26 97 aa10.79□□□□□ -0.68
ABCF3-218ENST00000498136 CARHSP1Q9Y2V2 147 aaKnown RBP10.79□□□□□ -0.68
ABCF3-218ENST00000498136 IGHV3-64A0A075B6Q5 118 aa10.78□□□□□ -0.68
ABCF3-218ENST00000498136 PRSS47A8MTI9 375 aa10.78□□□□□ -0.68
ABCF3-218ENST00000498136 MALP21145 153 aa10.78□□□□□ -0.68
ABCF3-218ENST00000498136 KIAA1644Q3SXP7 199 aa10.78□□□□□ -0.68
ABCF3-218ENST00000498136 Q8N8P6 123 aa10.78□□□□□ -0.68
ABCF3-218ENST00000498136 GVQW2A0A096LPI5 108 aaPredicted RBP10.77□□□□□ -0.69
ABCF3-218ENST00000498136 IGHV1-58A0A0C4DH39 117 aa10.77□□□□□ -0.69
ABCF3-218ENST00000498136 SLPIP03973 132 aa10.77□□□□□ -0.69
ABCF3-218ENST00000498136 IFI27P40305 119 aaPredicted RBP10.77□□□□□ -0.69
ABCF3-218ENST00000498136 OPRPNQ99935 248 aaPredicted RBP10.77□□□□□ -0.69
ABCF3-218ENST00000498136 LINC00528Q8N1L1 170 aa10.76□□□□□ -0.69
ABCF3-218ENST00000498136 CIRBP-AS1Q8TBR5 109 aa10.76□□□□□ -0.69
ABCF3-218ENST00000498136 ABCA13Q86UQ4 5058 aa10.75□□□□□ -0.69
ABCF3-218ENST00000498136 IFITM10A6NMD0 228 aa10.75□□□□□ -0.69
ABCF3-218ENST00000498136 ZNF561-AS1K7EIQ3 104 aa10.75□□□□□ -0.69
ABCF3-218ENST00000498136 COX7A2LO14548 114 aa10.75□□□□□ -0.69
ABCF3-218ENST00000498136 APOC3P02656 99 aa10.75□□□□□ -0.69
ABCF3-218ENST00000498136 MRPS36P82909 103 aaKnown RBP10.75□□□□□ -0.69
ABCF3-218ENST00000498136 NDUFA5Q16718 116 aa10.75□□□□□ -0.69
ABCF3-218ENST00000498136 ORMDL2Q53FV1 153 aa10.75□□□□□ -0.69
ABCF3-218ENST00000498136 SDIM1Q6ZPB5 146 aa10.75□□□□□ -0.69
ABCF3-218ENST00000498136 GNB1LQ9BYB4 327 aa10.75□□□□□ -0.69
ABCF3-218ENST00000498136 NXT2Q9NPJ8 142 aaKnown RBP10.75□□□□□ -0.69
ABCF3-218ENST00000498136 INAFM2P0DMQ5 153 aa10.74□□□□□ -0.69
ABCF3-218ENST00000498136 C5orf38Q86SI9 138 aa10.74□□□□□ -0.69
ABCF3-218ENST00000498136 LINC00526Q96FQ7 95 aa10.74□□□□□ -0.69
ABCF3-218ENST00000498136 DPH3Q96FX2 82 aa10.74□□□□□ -0.69
ABCF3-218ENST00000498136 CYSLTR1Q9Y271 337 aa10.74□□□□□ -0.69
ABCF3-218ENST00000498136 COX19Q49B96 90 aa10.73□□□□□ -0.69
ABCF3-218ENST00000498136 C2orf66Q6UXQ4 117 aa10.73□□□□□ -0.69
ABCF3-218ENST00000498136 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.73□□□□□ -0.69
ABCF3-218ENST00000498136 K7EMI3 77 aa10.72□□□□□ -0.69
ABCF3-218ENST00000498136 PLA2G1BP04054 148 aaKnown RBP10.72□□□□□ -0.69
ABCF3-218ENST00000498136 FAM104AQ969W3 186 aa10.72□□□□□ -0.69
ABCF3-218ENST00000498136 TMEM141Q96I45 108 aa10.72□□□□□ -0.69
ABCF3-218ENST00000498136 PYGO1Q9Y3Y4 419 aa10.72□□□□□ -0.69
ABCF3-218ENST00000498136 FAT1Q14517 4588 aa10.71□□□□□ -0.69
ABCF3-218ENST00000498136 IGLV4-3A0A075B6K6 122 aa10.71□□□□□ -0.69
ABCF3-218ENST00000498136 PANO1I0J062 215 aa10.71□□□□□ -0.69
ABCF3-218ENST00000498136 SNAPINO95295 136 aa10.71□□□□□ -0.69
ABCF3-218ENST00000498136 APOMO95445 188 aa10.71□□□□□ -0.69
ABCF3-218ENST00000498136 SVBPQ8N300 66 aa10.71□□□□□ -0.69
ABCF3-218ENST00000498136 PRSS3P2Q8NHM4 247 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms