RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 NCR3O14931 201 aa7.8□□□□□ -1.16
TRAPPC12-223ENST00000497597 Q8N6K4 173 aa7.8□□□□□ -1.16
TRAPPC12-223ENST00000497597 H3BUX3 64 aa7.8□□□□□ -1.16
TRAPPC12-223ENST00000497597 NDUFA4O00483 81 aa7.8□□□□□ -1.16
TRAPPC12-223ENST00000497597 LRRC75A-AS1Q8N1F1 130 aa7.8□□□□□ -1.16
TRAPPC12-223ENST00000497597 PAX4O43316 350 aa7.79□□□□□ -1.16
TRAPPC12-223ENST00000497597 FAM218AQ96MZ4 157 aa7.79□□□□□ -1.16
TRAPPC12-223ENST00000497597 CITED2Q99967 270 aaPredicted RBP7.79□□□□□ -1.16
TRAPPC12-223ENST00000497597 BPESC1Q9GZL8 116 aa7.79□□□□□ -1.16
TRAPPC12-223ENST00000497597 PKIGQ9Y2B9 76 aa7.79□□□□□ -1.16
TRAPPC12-223ENST00000497597 MUC6Q6W4X9 2439 aa7.79□□□□□ -1.16
TRAPPC12-223ENST00000497597 LECT2O14960 151 aa7.79□□□□□ -1.16
TRAPPC12-223ENST00000497597 C20orf197Q8N268 126 aa7.79□□□□□ -1.16
TRAPPC12-223ENST00000497597 BSNQ9UPA5 3926 aa7.79□□□□□ -1.16
TRAPPC12-223ENST00000497597 MED14OSP0DP75 135 aa7.78□□□□□ -1.16
TRAPPC12-223ENST00000497597 IMUPQ9GZP8 106 aa7.78□□□□□ -1.16
TRAPPC12-223ENST00000497597 MOB4Q9Y3A3 225 aa7.78□□□□□ -1.16
TRAPPC12-223ENST00000497597 HRNRQ86YZ3 2850 aaPredicted RBP7.78□□□□□ -1.16
TRAPPC12-223ENST00000497597 MALP21145 153 aa7.78□□□□□ -1.16
TRAPPC12-223ENST00000497597 SPANXDQ9BXN6 97 aa7.78□□□□□ -1.16
TRAPPC12-223ENST00000497597 SPANXCQ9NY87 97 aa7.78□□□□□ -1.16
TRAPPC12-223ENST00000497597 ZFYVE26Q68DK2 2539 aa7.78□□□□□ -1.16
TRAPPC12-223ENST00000497597 USP17L23D6RBM5 183 aa7.78□□□□□ -1.16
TRAPPC12-223ENST00000497597 HILS1P60008 231 aa7.78□□□□□ -1.16
TRAPPC12-223ENST00000497597 C5orf56Q8N8D9 126 aa7.78□□□□□ -1.16
TRAPPC12-223ENST00000497597 U3KQE9 123 aa7.78□□□□□ -1.16
TRAPPC12-223ENST00000497597 TRBV6-5A0A0K0K1A5 114 aa7.77□□□□□ -1.17
TRAPPC12-223ENST00000497597 RPL36AP83881 106 aaKnown RBP7.77□□□□□ -1.17
TRAPPC12-223ENST00000497597 COX6A2Q02221 97 aa7.77□□□□□ -1.17
TRAPPC12-223ENST00000497597 RPL18AQ02543 176 aaKnown RBP7.77□□□□□ -1.17
TRAPPC12-223ENST00000497597 RPL36ALQ969Q0 106 aaKnown RBP7.77□□□□□ -1.17
TRAPPC12-223ENST00000497597 OXTP01178 125 aa7.77□□□□□ -1.17
TRAPPC12-223ENST00000497597 FAM223BA6NKX1 122 aa7.76□□□□□ -1.17
TRAPPC12-223ENST00000497597 MRPS36P82909 103 aaKnown RBP7.76□□□□□ -1.17
TRAPPC12-223ENST00000497597 FAM223AQ8IWN6 122 aa7.76□□□□□ -1.17
TRAPPC12-223ENST00000497597 NAV2Q8IVL1 2488 aa7.76□□□□□ -1.17
TRAPPC12-223ENST00000497597 A0A0J9YX75 114 aa7.76□□□□□ -1.17
TRAPPC12-223ENST00000497597 GHRHP01286 108 aa7.76□□□□□ -1.17
TRAPPC12-223ENST00000497597 DEFB131AP59861 70 aa7.76□□□□□ -1.17
TRAPPC12-223ENST00000497597 C10orf99Q6UWK7 81 aa7.76□□□□□ -1.17
TRAPPC12-223ENST00000497597 SOSTDC1Q6X4U4 206 aa7.76□□□□□ -1.17
TRAPPC12-223ENST00000497597 TMEM243Q9BU79 118 aa7.76□□□□□ -1.17
TRAPPC12-223ENST00000497597 CFHR3Q02985 330 aa7.75□□□□□ -1.17
TRAPPC12-223ENST00000497597 PLA2G2CQ5R387 149 aa7.75□□□□□ -1.17
TRAPPC12-223ENST00000497597 HIST2H2BDQ6DRA6 164 aa7.75□□□□□ -1.17
TRAPPC12-223ENST00000497597 DCANP1Q8TF63 244 aa7.75□□□□□ -1.17
TRAPPC12-223ENST00000497597 UBE2E2Q96LR5 201 aa7.75□□□□□ -1.17
TRAPPC12-223ENST00000497597 PKD1L2Q7Z442 2459 aa7.75□□□□□ -1.17
TRAPPC12-223ENST00000497597 KLLNB2CW77 178 aa7.75□□□□□ -1.17
TRAPPC12-223ENST00000497597 MIR7-3HGQ8N6C7 128 aa7.75□□□□□ -1.17
TRAPPC12-223ENST00000497597 LINC00846Q9NV44 126 aa7.75□□□□□ -1.17
TRAPPC12-223ENST00000497597 SOCS3O14543 225 aa7.75□□□□□ -1.17
TRAPPC12-223ENST00000497597 COL27A1Q8IZC6 1860 aaPredicted RBP7.75□□□□□ -1.17
TRAPPC12-223ENST00000497597 C9orf129Q5T035 196 aaKnown RBP7.74□□□□□ -1.17
TRAPPC12-223ENST00000497597 IGFL3Q6UXB1 125 aa7.74□□□□□ -1.17
TRAPPC12-223ENST00000497597 Q6ZSN1 163 aa7.74□□□□□ -1.17
TRAPPC12-223ENST00000497597 SERP2Q8N6R1 65 aa7.74□□□□□ -1.17
TRAPPC12-223ENST00000497597 WFDC11Q8NEX6 87 aa7.74□□□□□ -1.17
TRAPPC12-223ENST00000497597 SND1-IT1Q9HBX3 110 aa7.74□□□□□ -1.17
TRAPPC12-223ENST00000497597 SPTBN4Q9H254 2564 aa7.74□□□□□ -1.17
TRAPPC12-223ENST00000497597 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.74□□□□□ -1.17
TRAPPC12-223ENST00000497597 DPH3Q96FX2 82 aa7.74□□□□□ -1.17
TRAPPC12-223ENST00000497597 UBE2L6O14933 153 aa7.74□□□□□ -1.17
TRAPPC12-223ENST00000497597 NBL1P41271 181 aa7.74□□□□□ -1.17
TRAPPC12-223ENST00000497597 CDSNQ15517 529 aa7.74□□□□□ -1.17
TRAPPC12-223ENST00000497597 A0A087WYN8 130 aa7.73□□□□□ -1.17
TRAPPC12-223ENST00000497597 TRAV25A0A0B4J276 109 aa7.73□□□□□ -1.17
TRAPPC12-223ENST00000497597 A0A0U1RQV1 116 aa7.73□□□□□ -1.17
TRAPPC12-223ENST00000497597 SIRPDQ9H106 197 aa7.73□□□□□ -1.17
TRAPPC12-223ENST00000497597 TRGV1A0A0A0MS02 117 aa7.73□□□□□ -1.17
TRAPPC12-223ENST00000497597 PIEZO1Q92508 2521 aa7.73□□□□□ -1.17
TRAPPC12-223ENST00000497597 FAM19A4Q96LR4 140 aa7.72□□□□□ -1.17
TRAPPC12-223ENST00000497597 RBMY1BA6NDE4 496 aaKnown RBP7.72□□□□□ -1.17
TRAPPC12-223ENST00000497597 RBMY1EA6NEQ0 496 aaKnown RBP7.72□□□□□ -1.17
TRAPPC12-223ENST00000497597 IGHG2P01859 326 aa7.72□□□□□ -1.17
TRAPPC12-223ENST00000497597 RBMY1DP0C7P1 496 aaKnown RBP7.72□□□□□ -1.17
TRAPPC12-223ENST00000497597 RBMY1A1P0DJD3 496 aaKnown RBP7.72□□□□□ -1.17
TRAPPC12-223ENST00000497597 RBMY1CP0DJD4 496 aa7.72□□□□□ -1.17
TRAPPC12-223ENST00000497597 RBMY1FQ15415 496 aaKnown RBP7.72□□□□□ -1.17
TRAPPC12-223ENST00000497597 COPS9Q8WXC6 57 aa7.72□□□□□ -1.17
TRAPPC12-223ENST00000497597 C9orf85Q96MD7 179 aa7.72□□□□□ -1.17
TRAPPC12-223ENST00000497597 XCL2Q9UBD3 114 aa7.72□□□□□ -1.17
TRAPPC12-223ENST00000497597 UBE2D4Q9Y2X8 147 aa7.72□□□□□ -1.17
TRAPPC12-223ENST00000497597 NDUFA1O15239 70 aa7.72□□□□□ -1.17
TRAPPC12-223ENST00000497597 HAMPP81172 84 aa7.72□□□□□ -1.17
TRAPPC12-223ENST00000497597 ENHOQ6UWT2 76 aa7.72□□□□□ -1.17
TRAPPC12-223ENST00000497597 Q8NA96 180 aa7.71□□□□□ -1.17
TRAPPC12-223ENST00000497597 IGHV4-38-2P0DP08 117 aa7.71□□□□□ -1.18
TRAPPC12-223ENST00000497597 CRYGAP11844 174 aa7.71□□□□□ -1.18
TRAPPC12-223ENST00000497597 TMEM258P61165 79 aa7.71□□□□□ -1.18
TRAPPC12-223ENST00000497597 FAM19A1Q7Z5A9 133 aa7.71□□□□□ -1.18
TRAPPC12-223ENST00000497597 CXCL5P42830 114 aa7.71□□□□□ -1.18
TRAPPC12-223ENST00000497597 DEFB136Q30KP8 78 aa7.71□□□□□ -1.18
TRAPPC12-223ENST00000497597 HIST2H2BCQ6DN03 193 aa7.71□□□□□ -1.18
TRAPPC12-223ENST00000497597 C5orf38Q86SI9 138 aa7.71□□□□□ -1.18
TRAPPC12-223ENST00000497597 PIMREGQ9BSJ6 248 aa7.71□□□□□ -1.18
TRAPPC12-223ENST00000497597 SNURFQ9Y675 71 aa7.71□□□□□ -1.18
TRAPPC12-223ENST00000497597 DEFB121Q5J5C9 76 aa7.7□□□□□ -1.18
TRAPPC12-223ENST00000497597 USMG5Q96IX5 58 aa7.7□□□□□ -1.18
TRAPPC12-223ENST00000497597 ABCA2Q9BZC7 2435 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 151.5 ms