RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 LINC00315P59091 139 aa3.35□□□□□ -1.87
BRCA1-224ENST00000497488 ZNF846Q147U1 533 aa3.35□□□□□ -1.87
BRCA1-224ENST00000497488 DEFB113Q30KQ7 82 aa3.35□□□□□ -1.87
BRCA1-224ENST00000497488 Q6ZTI0 123 aa3.35□□□□□ -1.87
BRCA1-224ENST00000497488 ARPINQ7Z6K5 226 aa3.35□□□□□ -1.87
BRCA1-224ENST00000497488 C8orf59Q8N0T1 100 aaPredicted RBP3.35□□□□□ -1.87
BRCA1-224ENST00000497488 ACBD7Q8N6N7 88 aa3.35□□□□□ -1.87
BRCA1-224ENST00000497488 MUCL1Q96DR8 90 aa3.35□□□□□ -1.87
BRCA1-224ENST00000497488 ZNF469Q96JG9 3925 aaPredicted RBP3.34□□□□□ -1.87
BRCA1-224ENST00000497488 FREM1Q5H8C1 2179 aa3.34□□□□□ -1.87
BRCA1-224ENST00000497488 A0A087WSZ3 146 aa3.34□□□□□ -1.87
BRCA1-224ENST00000497488 TMEM218A2RU14 115 aa3.34□□□□□ -1.87
BRCA1-224ENST00000497488 E7EQL1 145 aa3.34□□□□□ -1.87
BRCA1-224ENST00000497488 HIST1H1DP16402 221 aaKnown RBP3.34□□□□□ -1.87
BRCA1-224ENST00000497488 FXYD6P3P58550 94 aa3.34□□□□□ -1.87
BRCA1-224ENST00000497488 TPPP2P59282 170 aa3.34□□□□□ -1.87
BRCA1-224ENST00000497488 SNX29P2Q8IUI4 249 aa3.34□□□□□ -1.87
BRCA1-224ENST00000497488 DEFB107AQ8IZN7 70 aa3.34□□□□□ -1.87
BRCA1-224ENST00000497488 LINC00269Q8N2A0 174 aa3.34□□□□□ -1.87
BRCA1-224ENST00000497488 FAM19A2Q8N3H0 131 aa3.34□□□□□ -1.87
BRCA1-224ENST00000497488 CYYR1Q96J86 154 aa3.34□□□□□ -1.87
BRCA1-224ENST00000497488 Q96M85 177 aa3.34□□□□□ -1.87
BRCA1-224ENST00000497488 CCL19Q99731 98 aa3.34□□□□□ -1.87
BRCA1-224ENST00000497488 SMR3AQ99954 134 aa3.34□□□□□ -1.87
BRCA1-224ENST00000497488 AGPAT4-IT1Q9H0P7 198 aa3.34□□□□□ -1.87
BRCA1-224ENST00000497488 NOTCH2Q04721 2471 aa3.34□□□□□ -1.88
BRCA1-224ENST00000497488 NAV2Q8IVL1 2488 aa3.34□□□□□ -1.88
BRCA1-224ENST00000497488 VPS13CQ709C8 3753 aa3.33□□□□□ -1.88
BRCA1-224ENST00000497488 ANKHD1Q8IWZ3 2542 aaKnown RBP3.33□□□□□ -1.88
BRCA1-224ENST00000497488 ANK3Q12955 4377 aaKnown RBP3.33□□□□□ -1.88
BRCA1-224ENST00000497488 ZNF705FA8MVS1 300 aaPredicted RBP3.33□□□□□ -1.88
BRCA1-224ENST00000497488 ZNF736B4DX44 427 aaPredicted RBP3.33□□□□□ -1.88
BRCA1-224ENST00000497488 CD2P06729 351 aa3.33□□□□□ -1.88
BRCA1-224ENST00000497488 MIC13Q5XKP0 118 aa3.33□□□□□ -1.88
BRCA1-224ENST00000497488 TMEM254Q8TBM7 123 aa3.33□□□□□ -1.88
BRCA1-224ENST00000497488 COPS9Q8WXC6 57 aa3.33□□□□□ -1.88
BRCA1-224ENST00000497488 SEC11CQ9BY50 192 aa3.33□□□□□ -1.88
BRCA1-224ENST00000497488 IER3IP1Q9Y5U9 82 aa3.33□□□□□ -1.88
BRCA1-224ENST00000497488 MPDZO75970 2070 aa3.32□□□□□ -1.88
BRCA1-224ENST00000497488 TRAV30A0A087WSZ9 112 aa3.32□□□□□ -1.88
BRCA1-224ENST00000497488 IGHV1-24A0A0C4DH33 117 aa3.32□□□□□ -1.88
BRCA1-224ENST00000497488 HYPMO75409 117 aa3.32□□□□□ -1.88
BRCA1-224ENST00000497488 GNG2P59768 71 aa3.32□□□□□ -1.88
BRCA1-224ENST00000497488 KRTAP10-6P60371 365 aaPredicted RBP3.32□□□□□ -1.88
BRCA1-224ENST00000497488 PRR9Q5T870 116 aa3.32□□□□□ -1.88
BRCA1-224ENST00000497488 ATP11AUNQ6ZP68 121 aa3.32□□□□□ -1.88
BRCA1-224ENST00000497488 NAA60Q9H7X0 242 aa3.32□□□□□ -1.88
BRCA1-224ENST00000497488 PRRC2AP48634 2157 aaKnown RBP3.32□□□□□ -1.88
BRCA1-224ENST00000497488 DNHD1Q96M86 4753 aa3.31□□□□□ -1.88
BRCA1-224ENST00000497488 ARHGAP32A7KAX9 2087 aa3.31□□□□□ -1.88
BRCA1-224ENST00000497488 TANC2Q9HCD6 1990 aa3.31□□□□□ -1.88
BRCA1-224ENST00000497488 TRAV12-1A0A0B4J245 112 aa3.31□□□□□ -1.88
BRCA1-224ENST00000497488 C3orf85A0A1B0GTC6 90 aa3.31□□□□□ -1.88
BRCA1-224ENST00000497488 M0R143 59 aa3.31□□□□□ -1.88
BRCA1-224ENST00000497488 IFNA17P01571 189 aa3.31□□□□□ -1.88
BRCA1-224ENST00000497488 C10orf128Q5T292 105 aa3.31□□□□□ -1.88
BRCA1-224ENST00000497488 GTF2H5Q6ZYL4 71 aa3.31□□□□□ -1.88
BRCA1-224ENST00000497488 ATP6V0E2Q8NHE4 81 aa3.31□□□□□ -1.88
BRCA1-224ENST00000497488 HIVEP1P15822 2718 aa3.31□□□□□ -1.88
BRCA1-224ENST00000497488 MYO9AB2RTY4 2548 aa3.31□□□□□ -1.88
BRCA1-224ENST00000497488 ANKRD17O75179 2603 aaKnown RBP3.3□□□□□ -1.88
BRCA1-224ENST00000497488 ABCA4P78363 2273 aa3.3□□□□□ -1.88
BRCA1-224ENST00000497488 A0A096LNT2 108 aa3.3□□□□□ -1.88
BRCA1-224ENST00000497488 LOC107984156A0A0G2JMH3 177 aa3.3□□□□□ -1.88
BRCA1-224ENST00000497488 IGLV6-57P01721 117 aa3.3□□□□□ -1.88
BRCA1-224ENST00000497488 PKIAP61925 76 aa3.3□□□□□ -1.88
BRCA1-224ENST00000497488 SH2D6Q7Z4S9 175 aa3.3□□□□□ -1.88
BRCA1-224ENST00000497488 ARL17AQ8IVW1 177 aa3.3□□□□□ -1.88
BRCA1-224ENST00000497488 RPRMQ9NS64 109 aa3.3□□□□□ -1.88
BRCA1-224ENST00000497488 FAIMQ9NVQ4 179 aa3.3□□□□□ -1.88
BRCA1-224ENST00000497488 CCDC168Q8NDH2 2452 aa3.3□□□□□ -1.88
BRCA1-224ENST00000497488 SPG11Q96JI7 2443 aa3.3□□□□□ -1.88
BRCA1-224ENST00000497488 AKAP6Q13023 2319 aa3.3□□□□□ -1.88
BRCA1-224ENST00000497488 F8P00451 2351 aa3.29□□□□□ -1.88
BRCA1-224ENST00000497488 TRAV10A0A0B4J240 114 aa3.29□□□□□ -1.88
BRCA1-224ENST00000497488 A0A1W2PNN7 141 aa3.29□□□□□ -1.88
BRCA1-224ENST00000497488 TCRBV4S1A1TA0A5B7 111 aa3.29□□□□□ -1.88
BRCA1-224ENST00000497488 LYNX1G3V0Z9 82 aa3.29□□□□□ -1.88
BRCA1-224ENST00000497488 LYNX1P0DP58 116 aa3.29□□□□□ -1.88
BRCA1-224ENST00000497488 RPS27P42677 84 aaKnown RBP3.29□□□□□ -1.88
BRCA1-224ENST00000497488 HSD52Q0P140 79 aa3.29□□□□□ -1.88
BRCA1-224ENST00000497488 CATR1Q13166 79 aa3.29□□□□□ -1.88
BRCA1-224ENST00000497488 C10orf105Q8TEF2 133 aa3.29□□□□□ -1.88
BRCA1-224ENST00000497488 TIMM21Q9BVV7 248 aa3.29□□□□□ -1.88
BRCA1-224ENST00000497488 SPANXDQ9BXN6 97 aa3.29□□□□□ -1.88
BRCA1-224ENST00000497488 REG4Q9BYZ8 158 aa3.29□□□□□ -1.88
BRCA1-224ENST00000497488 CREBBPQ92793 2442 aa3.29□□□□□ -1.88
BRCA1-224ENST00000497488 A0A0G2JQZ4 141 aa3.28□□□□□ -1.88
BRCA1-224ENST00000497488 TCRBV3S1A0A5B6 114 aa3.28□□□□□ -1.88
BRCA1-224ENST00000497488 ERC2-IT1O76042 136 aa3.28□□□□□ -1.88
BRCA1-224ENST00000497488 GYPBP06028 91 aa3.28□□□□□ -1.88
BRCA1-224ENST00000497488 P0C880 135 aa3.28□□□□□ -1.88
BRCA1-224ENST00000497488 EFNA4P52798 201 aa3.28□□□□□ -1.88
BRCA1-224ENST00000497488 SMIM11AP58511 58 aa3.28□□□□□ -1.88
BRCA1-224ENST00000497488 Q56UQ5 140 aa3.28□□□□□ -1.88
BRCA1-224ENST00000497488 SPRNQ5BIV9 151 aa3.28□□□□□ -1.88
BRCA1-224ENST00000497488 SFT2D1Q8WV19 159 aa3.28□□□□□ -1.88
BRCA1-224ENST00000497488 SMIM7Q9BQ49 75 aa3.28□□□□□ -1.88
BRCA1-224ENST00000497488 BPESC1Q9GZL8 116 aa3.28□□□□□ -1.88
BRCA1-224ENST00000497488 DYNLRB1Q9NP97 96 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms