RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 CGB3P0DN86 165 aa2.1□□□□□ -2.07
SNRNP48-202ENST00000496946 CGB7P0DN87 165 aa2.1□□□□□ -2.07
SNRNP48-202ENST00000496946 DEFA4P12838 97 aa2.1□□□□□ -2.07
SNRNP48-202ENST00000496946 EGFEM1PQ0D2K5 195 aa2.1□□□□□ -2.07
SNRNP48-202ENST00000496946 C1orf147Q96MC9 270 aaPredicted RBP2.1□□□□□ -2.07
SNRNP48-202ENST00000496946 OBSCN-AS1Q96MR7 158 aa2.1□□□□□ -2.07
SNRNP48-202ENST00000496946 PRR15LQ9BU68 103 aa2.1□□□□□ -2.07
SNRNP48-202ENST00000496946 KRTAP4-4Q9BYR3 166 aa2.1□□□□□ -2.07
SNRNP48-202ENST00000496946 R4GMQ9 66 aa2.1□□□□□ -2.07
SNRNP48-202ENST00000496946 IGHV1-69P01742 117 aa2.1□□□□□ -2.07
SNRNP48-202ENST00000496946 LINC01547P58512 204 aaPredicted RBP2.1□□□□□ -2.07
SNRNP48-202ENST00000496946 ROMO1P60602 79 aa2.1□□□□□ -2.07
SNRNP48-202ENST00000496946 NREPQ16612 68 aa2.1□□□□□ -2.07
SNRNP48-202ENST00000496946 C9orf66Q5T8R8 295 aa2.1□□□□□ -2.07
SNRNP48-202ENST00000496946 ADM2Q7Z4H4 148 aa2.1□□□□□ -2.07
SNRNP48-202ENST00000496946 UBL5Q9BZL1 73 aa2.1□□□□□ -2.07
SNRNP48-202ENST00000496946 S4R3C0 116 aa2.1□□□□□ -2.07
SNRNP48-202ENST00000496946 COL5A1P20908 1838 aaPredicted RBP2.1□□□□□ -2.07
SNRNP48-202ENST00000496946 IGHV3-43A0A0B4J1X8 118 aa2.09□□□□□ -2.07
SNRNP48-202ENST00000496946 A0A0J9YX75 114 aa2.09□□□□□ -2.07
SNRNP48-202ENST00000496946 SAA2P0DJI9 122 aaPredicted RBP2.09□□□□□ -2.07
SNRNP48-202ENST00000496946 FDCSPQ8NFU4 85 aa2.09□□□□□ -2.07
SNRNP48-202ENST00000496946 SVILO95425 2214 aa2.09□□□□□ -2.07
SNRNP48-202ENST00000496946 IGLV4-3A0A075B6K6 122 aa2.09□□□□□ -2.08
SNRNP48-202ENST00000496946 LRCOL1A6NCL2 159 aa2.09□□□□□ -2.08
SNRNP48-202ENST00000496946 IGIPA6NJ69 53 aa2.09□□□□□ -2.08
SNRNP48-202ENST00000496946 CCL22O00626 93 aa2.09□□□□□ -2.08
SNRNP48-202ENST00000496946 LHBP01229 141 aa2.09□□□□□ -2.08
SNRNP48-202ENST00000496946 MIAQ16674 131 aa2.09□□□□□ -2.08
SNRNP48-202ENST00000496946 KRTAP5-11Q6L8G4 156 aa2.09□□□□□ -2.08
SNRNP48-202ENST00000496946 ZNF833PQ6ZTB9 187 aa2.09□□□□□ -2.08
SNRNP48-202ENST00000496946 TMEM14CQ9P0S9 112 aa2.09□□□□□ -2.08
SNRNP48-202ENST00000496946 MUC22E2RYF6 1773 aaPredicted RBP2.09□□□□□ -2.08
SNRNP48-202ENST00000496946 ZNF407Q9C0G0 2248 aa2.08□□□□□ -2.08
SNRNP48-202ENST00000496946 IGHV4-30-2A0A087WSY4 118 aa2.08□□□□□ -2.08
SNRNP48-202ENST00000496946 TRAV10A0A0B4J240 114 aa2.08□□□□□ -2.08
SNRNP48-202ENST00000496946 PPP1R17O96001 155 aa2.08□□□□□ -2.08
SNRNP48-202ENST00000496946 IGHV3-30-3P0DP02 117 aa2.08□□□□□ -2.08
SNRNP48-202ENST00000496946 PRR4Q16378 134 aa2.08□□□□□ -2.08
SNRNP48-202ENST00000496946 LUZP6Q538Z0 58 aa2.08□□□□□ -2.08
SNRNP48-202ENST00000496946 SMIM29Q86T20 159 aa2.08□□□□□ -2.08
SNRNP48-202ENST00000496946 CAMK2N2Q96S95 79 aa2.08□□□□□ -2.08
SNRNP48-202ENST00000496946 C8orf17Q9NRJ1 99 aa2.08□□□□□ -2.08
SNRNP48-202ENST00000496946 TRAV12-3A0A0B4J271 114 aa2.08□□□□□ -2.08
SNRNP48-202ENST00000496946 SMIM1B2RUZ4 78 aa2.08□□□□□ -2.08
SNRNP48-202ENST00000496946 SRRM5B3KS81 715 aa2.08□□□□□ -2.08
SNRNP48-202ENST00000496946 K7ERS5 55 aa2.08□□□□□ -2.08
SNRNP48-202ENST00000496946 IGHV3-11P01762 117 aa2.08□□□□□ -2.08
SNRNP48-202ENST00000496946 KRTAP10-6P60371 365 aaPredicted RBP2.08□□□□□ -2.08
SNRNP48-202ENST00000496946 C14orf178Q8N769 122 aaPredicted RBP2.08□□□□□ -2.08
SNRNP48-202ENST00000496946 KLHL30-AS1Q8NEE0 82 aa2.08□□□□□ -2.08
SNRNP48-202ENST00000496946 SMIM14Q96QK8 99 aa2.08□□□□□ -2.08
SNRNP48-202ENST00000496946 NDUFA4L2Q9NRX3 87 aa2.08□□□□□ -2.08
SNRNP48-202ENST00000496946 C22orf24Q9Y442 160 aa2.08□□□□□ -2.08
SNRNP48-202ENST00000496946 TET2Q6N021 2002 aaPredicted RBP2.08□□□□□ -2.08
SNRNP48-202ENST00000496946 IGLV8-61A0A075B6I0 122 aa2.07□□□□□ -2.08
SNRNP48-202ENST00000496946 MSMBP08118 114 aa2.07□□□□□ -2.08
SNRNP48-202ENST00000496946 ELOF1P60002 83 aaKnown RBP2.07□□□□□ -2.08
SNRNP48-202ENST00000496946 WFDC9Q8NEX5 89 aa2.07□□□□□ -2.08
SNRNP48-202ENST00000496946 C14orf132Q9NPU4 83 aa2.07□□□□□ -2.08
SNRNP48-202ENST00000496946 IGHV3-21A0A0B4J1V1 117 aa2.07□□□□□ -2.08
SNRNP48-202ENST00000496946 TRAV21A0A0B4J279 112 aa2.07□□□□□ -2.08
SNRNP48-202ENST00000496946 IGLV2-23P01705 113 aa2.07□□□□□ -2.08
SNRNP48-202ENST00000496946 LYZL1Q6UWQ5 148 aa2.07□□□□□ -2.08
SNRNP48-202ENST00000496946 Q8NDZ9 215 aa2.07□□□□□ -2.08
SNRNP48-202ENST00000496946 AMELXQ99217 191 aa2.07□□□□□ -2.08
SNRNP48-202ENST00000496946 GPR98Q8WXG9 6306 aa2.07□□□□□ -2.08
SNRNP48-202ENST00000496946 PI4KAP42356 2102 aa2.07□□□□□ -2.08
SNRNP48-202ENST00000496946 ARHGAP32A7KAX9 2087 aa2.07□□□□□ -2.08
SNRNP48-202ENST00000496946 TRBV6-5A0A0K0K1A5 114 aa2.06□□□□□ -2.08
SNRNP48-202ENST00000496946 TRBV6-1A0A0K0K1D8 114 aa2.06□□□□□ -2.08
SNRNP48-202ENST00000496946 FAM74A4Q5TZK3 123 aa2.06□□□□□ -2.08
SNRNP48-202ENST00000496946 C2orf66Q6UXQ4 117 aa2.06□□□□□ -2.08
SNRNP48-202ENST00000496946 DNAJC13O75165 2243 aa2.06□□□□□ -2.08
SNRNP48-202ENST00000496946 CXorf51AA0A1B0GTR3 108 aa2.06□□□□□ -2.08
SNRNP48-202ENST00000496946 A8MWP4 228 aa2.06□□□□□ -2.08
SNRNP48-202ENST00000496946 KRTAP4-16G5E9R7 235 aaPredicted RBP2.06□□□□□ -2.08
SNRNP48-202ENST00000496946 IGLV3-19P01714 112 aa2.06□□□□□ -2.08
SNRNP48-202ENST00000496946 PATE4P0C8F1 98 aa2.06□□□□□ -2.08
SNRNP48-202ENST00000496946 LINC00322Q6ZN03 302 aaPredicted RBP2.06□□□□□ -2.08
SNRNP48-202ENST00000496946 Q6ZQT0 140 aa2.06□□□□□ -2.08
SNRNP48-202ENST00000496946 ORMDL1Q9P0S3 153 aa2.06□□□□□ -2.08
SNRNP48-202ENST00000496946 IGLV2-18A0A075B6J9 118 aa2.05□□□□□ -2.08
SNRNP48-202ENST00000496946 JMJD7-PLA2G4BH0Y9G9 81 aa2.05□□□□□ -2.08
SNRNP48-202ENST00000496946 LECT2O14960 151 aa2.05□□□□□ -2.08
SNRNP48-202ENST00000496946 IGLV3-25P01717 112 aa2.05□□□□□ -2.08
SNRNP48-202ENST00000496946 MIR22HGQ0VDD5 57 aa2.05□□□□□ -2.08
SNRNP48-202ENST00000496946 RNASE13Q5GAN3 156 aaKnown RBP2.05□□□□□ -2.08
SNRNP48-202ENST00000496946 LYPD2Q6UXB3 125 aa2.05□□□□□ -2.08
SNRNP48-202ENST00000496946 DEFB106AQ8N104 65 aa2.05□□□□□ -2.08
SNRNP48-202ENST00000496946 LYPD1Q8N2G4 141 aa2.05□□□□□ -2.08
SNRNP48-202ENST00000496946 Q9BRP9 147 aa2.05□□□□□ -2.08
SNRNP48-202ENST00000496946 KIAA0100Q14667 2235 aaKnown RBP2.05□□□□□ -2.08
SNRNP48-202ENST00000496946 IGHV3-49A0A0A0MS15 119 aa2.05□□□□□ -2.08
SNRNP48-202ENST00000496946 A0A1B0GUV1 79 aa2.05□□□□□ -2.08
SNRNP48-202ENST00000496946 BPY2O14599 106 aa2.05□□□□□ -2.08
SNRNP48-202ENST00000496946 NDUFB1O75438 58 aa2.05□□□□□ -2.08
SNRNP48-202ENST00000496946 IGKV3-11P04433 115 aa2.05□□□□□ -2.08
SNRNP48-202ENST00000496946 CASC10Q5T4H9 136 aa2.05□□□□□ -2.08
SNRNP48-202ENST00000496946 NPBQ8NG41 125 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 204.7 ms