RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 SVBPQ8N300 66 aa12.68□□□□□ -0.38
CTDSP1-213ENST00000496785 CSDC2Q9Y534 153 aaKnown RBP12.68□□□□□ -0.38
CTDSP1-213ENST00000496785 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.67□□□□□ -0.38
CTDSP1-213ENST00000496785 IGKV3OR2-268A0A0C4DH90 116 aa12.67□□□□□ -0.38
CTDSP1-213ENST00000496785 USP17L23D6RBM5 183 aa12.67□□□□□ -0.38
CTDSP1-213ENST00000496785 SNAPINO95295 136 aa12.67□□□□□ -0.38
CTDSP1-213ENST00000496785 APOC3P02656 99 aa12.67□□□□□ -0.38
CTDSP1-213ENST00000496785 FUSP35637 526 aaKnown RBP eCLIP12.67□□□□□ -0.389e-7■□□□□ 9.5
CTDSP1-213ENST00000496785 PRSS47A8MTI9 375 aa12.66□□□□□ -0.38
CTDSP1-213ENST00000496785 KRTAP26-1Q6PEX3 210 aa12.66□□□□□ -0.38
CTDSP1-213ENST00000496785 TIMM21Q9BVV7 248 aa12.66□□□□□ -0.38
CTDSP1-213ENST00000496785 DYNC1H1Q14204 4646 aaKnown RBP12.66□□□□□ -0.38
CTDSP1-213ENST00000496785 ZNF664Q8N3J9 261 aa12.65□□□□□ -0.38
CTDSP1-213ENST00000496785 CDC42SE2Q9NRR3 84 aa12.65□□□□□ -0.38
CTDSP1-213ENST00000496785 UBE2D4Q9Y2X8 147 aa12.65□□□□□ -0.38
CTDSP1-213ENST00000496785 MT-ND6P03923 174 aa12.64□□□□□ -0.39
CTDSP1-213ENST00000496785 GNB1LQ9BYB4 327 aa12.64□□□□□ -0.39
CTDSP1-213ENST00000496785 KIAA1109Q2LD37 5005 aa12.63□□□□□ -0.39
CTDSP1-213ENST00000496785 SS18Q15532 418 aa12.63□□□□□ -0.39
CTDSP1-213ENST00000496785 CFAP161Q6P656 301 aa12.63□□□□□ -0.39
CTDSP1-213ENST00000496785 GAGE12HA6NDE8 117 aa12.62□□□□□ -0.39
CTDSP1-213ENST00000496785 K7EMI3 77 aa12.62□□□□□ -0.39
CTDSP1-213ENST00000496785 CCL25O15444 150 aa12.62□□□□□ -0.39
CTDSP1-213ENST00000496785 KRTAP10-1P60331 282 aa12.62□□□□□ -0.39
CTDSP1-213ENST00000496785 CHCHD10Q8WYQ3 142 aaPredicted RBP12.62□□□□□ -0.39
CTDSP1-213ENST00000496785 NXT2Q9NPJ8 142 aaKnown RBP12.62□□□□□ -0.39
CTDSP1-213ENST00000496785 SPANXA1Q9NS26 97 aa12.62□□□□□ -0.39
CTDSP1-213ENST00000496785 LOC389332A0A1B0GUA5 103 aa12.61□□□□□ -0.39
CTDSP1-213ENST00000496785 LINC00959A0A1B0GUT2 108 aa12.61□□□□□ -0.39
CTDSP1-213ENST00000496785 Q8N8P6 123 aa12.61□□□□□ -0.39
CTDSP1-213ENST00000496785 C1orf196B1AJZ1 125 aa12.59□□□□□ -0.39
CTDSP1-213ENST00000496785 IFI27P40305 119 aaPredicted RBP12.59□□□□□ -0.39
CTDSP1-213ENST00000496785 ORMDL2Q53FV1 153 aa12.59□□□□□ -0.39
CTDSP1-213ENST00000496785 AP5S1Q9NUS5 200 aa12.59□□□□□ -0.39
CTDSP1-213ENST00000496785 G0S2P27469 103 aa12.58□□□□□ -0.4
CTDSP1-213ENST00000496785 RPL39P62891 51 aaKnown RBP12.58□□□□□ -0.4
CTDSP1-213ENST00000496785 hDV102S1A0JD36 115 aa12.57□□□□□ -0.4
CTDSP1-213ENST00000496785 PRSS1P07477 247 aa12.57□□□□□ -0.4
CTDSP1-213ENST00000496785 XCL1P47992 114 aa12.57□□□□□ -0.4
CTDSP1-213ENST00000496785 MRPS36P82909 103 aaKnown RBP12.57□□□□□ -0.4
CTDSP1-213ENST00000496785 Q6ZUT4 128 aa12.57□□□□□ -0.4
CTDSP1-213ENST00000496785 KIAA1644Q3SXP7 199 aa12.56□□□□□ -0.4
CTDSP1-213ENST00000496785 CD164L2Q6UWJ8 174 aa12.56□□□□□ -0.4
CTDSP1-213ENST00000496785 CYSLTR1Q9Y271 337 aa12.56□□□□□ -0.4
CTDSP1-213ENST00000496785 PYGO1Q9Y3Y4 419 aa12.56□□□□□ -0.4
CTDSP1-213ENST00000496785 HERC2O95714 4834 aa12.55□□□□□ -0.4
CTDSP1-213ENST00000496785 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.55□□□□□ -0.4
CTDSP1-213ENST00000496785 FABP9Q0Z7S8 132 aa12.55□□□□□ -0.4
CTDSP1-213ENST00000496785 FOXI1Q12951 378 aa12.55□□□□□ -0.4
CTDSP1-213ENST00000496785 MRPL18Q9H0U6 180 aaKnown RBP12.55□□□□□ -0.4
CTDSP1-213ENST00000496785 LRP1BQ9NZR2 4599 aa12.55□□□□□ -0.4
CTDSP1-213ENST00000496785 RYR1P21817 5038 aa12.53□□□□□ -0.4
CTDSP1-213ENST00000496785 TRAV13-1A0A0B4J241 112 aa12.53□□□□□ -0.4
CTDSP1-213ENST00000496785 CNBPP62633 177 aaKnown RBP12.53□□□□□ -0.4
CTDSP1-213ENST00000496785 RNASE13Q5GAN3 156 aaKnown RBP12.53□□□□□ -0.4
CTDSP1-213ENST00000496785 C2orf66Q6UXQ4 117 aa12.53□□□□□ -0.4
CTDSP1-213ENST00000496785 PRSS3P2Q8NHM4 247 aa12.53□□□□□ -0.4
CTDSP1-213ENST00000496785 DNAH5Q8TE73 4624 aa12.52□□□□□ -0.4
CTDSP1-213ENST00000496785 TGIF2-C20orf24A0A0A6YYL0 155 aa12.52□□□□□ -0.41
CTDSP1-213ENST00000496785 IGHV1-58A0A0C4DH39 117 aa12.52□□□□□ -0.41
CTDSP1-213ENST00000496785 NPSP0C0P6 89 aa12.52□□□□□ -0.41
CTDSP1-213ENST00000496785 C15orf56Q8N910 161 aa12.52□□□□□ -0.41
CTDSP1-213ENST00000496785 C9orf163Q8N9P6 203 aa12.52□□□□□ -0.41
CTDSP1-213ENST00000496785 ALKBH7Q9BT30 221 aaPredicted RBP12.52□□□□□ -0.41
CTDSP1-213ENST00000496785 LINC01549A6NIU2 74 aa12.51□□□□□ -0.41
CTDSP1-213ENST00000496785 IFITM10A6NMD0 228 aa12.51□□□□□ -0.41
CTDSP1-213ENST00000496785 XGP55808 180 aa12.51□□□□□ -0.41
CTDSP1-213ENST00000496785 Q6ZN92 141 aa12.51□□□□□ -0.41
CTDSP1-213ENST00000496785 Q6ZSA8 131 aa12.51□□□□□ -0.41
CTDSP1-213ENST00000496785 TMEM141Q96I45 108 aa12.51□□□□□ -0.41
CTDSP1-213ENST00000496785 TRAPPC1Q9Y5R8 145 aa12.51□□□□□ -0.41
CTDSP1-213ENST00000496785 GVQW2A0A096LPI5 108 aaPredicted RBP12.5□□□□□ -0.41
CTDSP1-213ENST00000496785 COX7A2LO14548 114 aa12.5□□□□□ -0.41
CTDSP1-213ENST00000496785 MALP21145 153 aa12.5□□□□□ -0.41
CTDSP1-213ENST00000496785 PAPPA-AS1Q5QFB9 102 aa12.5□□□□□ -0.41
CTDSP1-213ENST00000496785 Q8N1X5 172 aa12.5□□□□□ -0.41
CTDSP1-213ENST00000496785 LINC01620Q4KN68 170 aa12.49□□□□□ -0.41
CTDSP1-213ENST00000496785 TEX43Q6ZNM6 134 aa12.49□□□□□ -0.41
CTDSP1-213ENST00000496785 IGLV4-3A0A075B6K6 122 aa12.48□□□□□ -0.41
CTDSP1-213ENST00000496785 HIGD2BQ4VC39 106 aa12.48□□□□□ -0.41
CTDSP1-213ENST00000496785 C2orf88Q9BSF0 95 aa12.48□□□□□ -0.41
CTDSP1-213ENST00000496785 SMCO4Q9NRQ5 59 aa12.48□□□□□ -0.41
CTDSP1-213ENST00000496785 IGHV3-64A0A075B6Q5 118 aa12.47□□□□□ -0.41
CTDSP1-213ENST00000496785 APOMO95445 188 aa12.47□□□□□ -0.41
CTDSP1-213ENST00000496785 FA2HQ7L5A8 372 aa12.47□□□□□ -0.41
CTDSP1-213ENST00000496785 OPRPNQ99935 248 aaPredicted RBP12.47□□□□□ -0.41
CTDSP1-213ENST00000496785 ZNF561-AS1K7EIQ3 104 aa12.46□□□□□ -0.41
CTDSP1-213ENST00000496785 SLC7A5P1Q8MH63 180 aa12.46□□□□□ -0.41
CTDSP1-213ENST00000496785 FAM104AQ969W3 186 aa12.46□□□□□ -0.41
CTDSP1-213ENST00000496785 FAM30AQ9NZY2 134 aa12.46□□□□□ -0.41
CTDSP1-213ENST00000496785 PKIGQ9Y2B9 76 aa12.46□□□□□ -0.41
CTDSP1-213ENST00000496785 LINC01546A6NGU7 62 aa12.45□□□□□ -0.42
CTDSP1-213ENST00000496785 TOMM6Q96B49 74 aa12.45□□□□□ -0.42
CTDSP1-213ENST00000496785 TIMM17AQ99595 171 aa12.45□□□□□ -0.42
CTDSP1-213ENST00000496785 VCX2Q9H322 139 aa12.45□□□□□ -0.42
CTDSP1-213ENST00000496785 IGIPA6NJ69 53 aa12.43□□□□□ -0.42
CTDSP1-213ENST00000496785 ERASQ7Z444 233 aa12.42□□□□□ -0.42
CTDSP1-213ENST00000496785 C5orf38Q86SI9 138 aa12.42□□□□□ -0.42
CTDSP1-213ENST00000496785 CHAC1Q9BUX1 264 aa12.42□□□□□ -0.42
CTDSP1-213ENST00000496785 APOBP04114 4563 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms