RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-223ENST00000496296 Q6ZTI0 123 aa15.09■□□□□ 0.01
FGFR1-223ENST00000496296 SPANXB1Q9NS25 103 aaPredicted RBP15.09■□□□□ 0.01
FGFR1-223ENST00000496296 IGLL5B9A064 214 aa15.08■□□□□ 0.01
FGFR1-223ENST00000496296 MRPS36P82909 103 aaKnown RBP15.08■□□□□ 0.01
FGFR1-223ENST00000496296 PLEKHB2Q96CS7 222 aa15.08■□□□□ 0.01
FGFR1-223ENST00000496296 TRBV10-1A0A0K0K1A3 114 aa15.08■□□□□ 0
FGFR1-223ENST00000496296 TSPEAR-AS2P59090 65 aa15.08■□□□□ 0
FGFR1-223ENST00000496296 UBE2D4Q9Y2X8 147 aa15.08■□□□□ 0
FGFR1-223ENST00000496296 TRAV4A0A0B4J268 109 aa15.07■□□□□ 0
FGFR1-223ENST00000496296 A0A0J9YY99 117 aa15.07■□□□□ 0
FGFR1-223ENST00000496296 J3QQQ9 107 aa15.07■□□□□ 0
FGFR1-223ENST00000496296 DEFB135Q30KP9 77 aa15.07■□□□□ 0
FGFR1-223ENST00000496296 TIMM21Q9BVV7 248 aa15.07■□□□□ 0
FGFR1-223ENST00000496296 SCGB1D4Q6XE38 83 aa15.06■□□□□ 0
FGFR1-223ENST00000496296 X6R8D5 127 aa15.06■□□□□ 0
FGFR1-223ENST00000496296 TRGV2A0A075B6R0 118 aa15.06■□□□□ 0
FGFR1-223ENST00000496296 COTL1Q14019 142 aa15.06■□□□□ 0
FGFR1-223ENST00000496296 A0A0J9YXV3 536 aa15.05■□□□□ -0
FGFR1-223ENST00000496296 RNF151Q2KHN1 245 aa15.05■□□□□ -0
FGFR1-223ENST00000496296 FBN3Q75N90 2809 aa15.05■□□□□ -0
FGFR1-223ENST00000496296 CIDEAO60543 219 aa15.04■□□□□ -0
FGFR1-223ENST00000496296 GAGE7O76087 117 aa15.04■□□□□ -0
FGFR1-223ENST00000496296 GAGE12FP0CL80 117 aa15.04■□□□□ -0
FGFR1-223ENST00000496296 GAGE12GP0CL81 117 aa15.04■□□□□ -0
FGFR1-223ENST00000496296 GAGE12IP0CL82 117 aa15.04■□□□□ -0
FGFR1-223ENST00000496296 SLC25A29Q8N8R3 303 aa15.04■□□□□ -0
FGFR1-223ENST00000496296 ZNF479Q96JC4 524 aa15.04■□□□□ -0
FGFR1-223ENST00000496296 CMYA5Q8N3K9 4069 aa15.04■□□□□ -0
FGFR1-223ENST00000496296 TMEM238LA0A1B0GVL6 79 aa15.03■□□□□ -0
FGFR1-223ENST00000496296 A6NJY4 79 aa15.03■□□□□ -0
FGFR1-223ENST00000496296 NBEAL1Q6ZS30 2694 aa15.03■□□□□ -0
FGFR1-223ENST00000496296 A8MZ25 164 aa15.03■□□□□ -0
FGFR1-223ENST00000496296 G3V4G9 280 aa15.03■□□□□ -0
FGFR1-223ENST00000496296 LGALS3P17931 250 aaKnown RBP15.03■□□□□ -0
FGFR1-223ENST00000496296 TINCRA0A1B0GVN0 87 aa15.02■□□□□ -0
FGFR1-223ENST00000496296 PCP4P48539 62 aa15.02■□□□□ -0
FGFR1-223ENST00000496296 UBE2D1P51668 147 aa15.02■□□□□ -0
FGFR1-223ENST00000496296 K7EQD1 137 aa15.01□□□□□ -0.01
FGFR1-223ENST00000496296 VPS25Q9BRG1 176 aa15.01□□□□□ -0.01
FGFR1-223ENST00000496296 RNF183Q96D59 192 aa15□□□□□ -0.01
FGFR1-223ENST00000496296 MGAM2Q2M2H8 2515 aa14.99□□□□□ -0.01
FGFR1-223ENST00000496296 RPL36AP83881 106 aaKnown RBP14.99□□□□□ -0.01
FGFR1-223ENST00000496296 SRSF9Q13242 221 aaKnown RBP eCLIP14.99□□□□□ -0.01
FGFR1-223ENST00000496296 RPL36ALQ969Q0 106 aaKnown RBP14.99□□□□□ -0.01
FGFR1-223ENST00000496296 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.99□□□□□ -0.01
FGFR1-223ENST00000496296 IGKV2-29A2NJV5 120 aaPredicted RBP14.99□□□□□ -0.01
FGFR1-223ENST00000496296 MIFP14174 115 aa14.99□□□□□ -0.01
FGFR1-223ENST00000496296 CEMP1Q6PRD7 247 aaPredicted RBP14.99□□□□□ -0.01
FGFR1-223ENST00000496296 DAZ4Q86SG3 579 aaKnown RBP14.99□□□□□ -0.01
FGFR1-223ENST00000496296 DAZ3Q9NR90 486 aaKnown RBP14.99□□□□□ -0.01
FGFR1-223ENST00000496296 F8W1H4 67 aa14.98□□□□□ -0.01
FGFR1-223ENST00000496296 IGHV3-30P01768 117 aa14.98□□□□□ -0.01
FGFR1-223ENST00000496296 IGHV3-30-5P0DP03 117 aa14.98□□□□□ -0.01
FGFR1-223ENST00000496296 IGHV3-38A0A0C4DH36 116 aa14.97□□□□□ -0.01
FGFR1-223ENST00000496296 UBE2D3P61077 147 aa14.97□□□□□ -0.01
FGFR1-223ENST00000496296 UBE2D2P62837 147 aa14.97□□□□□ -0.01
FGFR1-223ENST00000496296 Q6ZUT4 128 aa14.97□□□□□ -0.01
FGFR1-223ENST00000496296 CSDC2Q9Y534 153 aaKnown RBP14.97□□□□□ -0.01
FGFR1-223ENST00000496296 LYRM9A8MSI8 78 aa14.96□□□□□ -0.01
FGFR1-223ENST00000496296 DEFB130BP0DP73 79 aa14.96□□□□□ -0.01
FGFR1-223ENST00000496296 DEFB130AP0DP74 79 aa14.96□□□□□ -0.01
FGFR1-223ENST00000496296 TIRAPP58753 221 aa14.96□□□□□ -0.01
FGFR1-223ENST00000496296 FAM19A3Q7Z5A8 133 aa14.96□□□□□ -0.01
FGFR1-223ENST00000496296 IGLV5-45A0A087WSX0 123 aa14.95□□□□□ -0.02
FGFR1-223ENST00000496296 TRGV4A0A0C4DH28 118 aa14.95□□□□□ -0.02
FGFR1-223ENST00000496296 SBSPONQ8IVN8 264 aa14.95□□□□□ -0.02
FGFR1-223ENST00000496296 LINC00612Q8N6U2 182 aa14.95□□□□□ -0.02
FGFR1-223ENST00000496296 IGHV4-28A0A0C4DH34 117 aa14.95□□□□□ -0.02
FGFR1-223ENST00000496296 IGHV1-58A0A0C4DH39 117 aa14.95□□□□□ -0.02
FGFR1-223ENST00000496296 IGHV3-30-3P0DP02 117 aa14.95□□□□□ -0.02
FGFR1-223ENST00000496296 GTSF1LQ9H1H1 148 aa14.94□□□□□ -0.02
FGFR1-223ENST00000496296 FAM222AQ5U5X8 452 aa14.93□□□□□ -0.02
FGFR1-223ENST00000496296 TRBV6-4A0A1B0GX49 114 aa14.93□□□□□ -0.02
FGFR1-223ENST00000496296 SMAGPQ0VAQ4 97 aa14.93□□□□□ -0.02
FGFR1-223ENST00000496296 NTM-AS1Q6ZSK4 140 aa14.92□□□□□ -0.02
FGFR1-223ENST00000496296 Q8NAQ8 132 aa14.92□□□□□ -0.02
FGFR1-223ENST00000496296 VSIG2Q96IQ7 327 aa14.92□□□□□ -0.02
FGFR1-223ENST00000496296 C10orf126Q8N4M7 172 aa14.91□□□□□ -0.02
FGFR1-223ENST00000496296 RNASE13Q5GAN3 156 aaKnown RBP14.91□□□□□ -0.02
FGFR1-223ENST00000496296 PGPEP1Q9NXJ5 209 aa14.91□□□□□ -0.02
FGFR1-223ENST00000496296 DEFB4AO15263 64 aa14.9□□□□□ -0.02
FGFR1-223ENST00000496296 FHL2Q14192 279 aa14.9□□□□□ -0.02
FGFR1-223ENST00000496296 A0A0J9YXY3 114 aa14.89□□□□□ -0.03
FGFR1-223ENST00000496296 TMEM238C9JI98 176 aa14.89□□□□□ -0.03
FGFR1-223ENST00000496296 H3BMG7 143 aa14.89□□□□□ -0.03
FGFR1-223ENST00000496296 H7C423 109 aa14.89□□□□□ -0.03
FGFR1-223ENST00000496296 DGAT2L7PQ6IED9 249 aa14.89□□□□□ -0.03
FGFR1-223ENST00000496296 SPART-AS1P0CW21 52 aa14.88□□□□□ -0.03
FGFR1-223ENST00000496296 GEMIN7Q9H840 131 aaKnown RBP14.88□□□□□ -0.03
FGFR1-223ENST00000496296 PRO0461Q9UI25 63 aa14.88□□□□□ -0.03
FGFR1-223ENST00000496296 IGHV3-64A0A075B6Q5 118 aa14.87□□□□□ -0.03
FGFR1-223ENST00000496296 GAGE12JA6NER3 117 aa14.87□□□□□ -0.03
FGFR1-223ENST00000496296 CFC1BP0CG36 223 aa14.87□□□□□ -0.03
FGFR1-223ENST00000496296 CFC1P0CG37 223 aa14.87□□□□□ -0.03
FGFR1-223ENST00000496296 DAD1P61803 113 aa14.87□□□□□ -0.03
FGFR1-223ENST00000496296 GAGE4Q13068 117 aa14.87□□□□□ -0.03
FGFR1-223ENST00000496296 GAGE5Q13069 117 aa14.87□□□□□ -0.03
FGFR1-223ENST00000496296 GAGE13Q4V321 117 aa14.87□□□□□ -0.03
FGFR1-223ENST00000496296 TRAV8-3A0A0A6YYJ7 113 aa14.86□□□□□ -0.03
FGFR1-223ENST00000496296 LINC00694P0DN24 101 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms