RNA–Protein interactions for RNA: ENST00000495705.5

LMO4-204, Transcript of LIM domain only 4, humanhuman

TSL 3

Gene LMO4, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-204ENST00000495705 FABP9Q0Z7S8 132 aa13.28□□□□□ -0.28
LMO4-204ENST00000495705 MAPKAPK5-AS1Q8N8E1 139 aa13.28□□□□□ -0.28
LMO4-204ENST00000495705 TIMM21Q9BVV7 248 aa13.28□□□□□ -0.28
LMO4-204ENST00000495705 NXT2Q9NPJ8 142 aaKnown RBP13.28□□□□□ -0.28
LMO4-204ENST00000495705 SMCO4Q9NRQ5 59 aa13.28□□□□□ -0.28
LMO4-204ENST00000495705 KRTAP10-2P60368 255 aa13.27□□□□□ -0.29
LMO4-204ENST00000495705 CDPF1Q6NVV7 123 aa13.27□□□□□ -0.29
LMO4-204ENST00000495705 CDC42SE2Q9NRR3 84 aa13.27□□□□□ -0.29
LMO4-204ENST00000495705 PGPEP1Q9NXJ5 209 aa13.27□□□□□ -0.29
LMO4-204ENST00000495705 IGLV10-54A0A075B6I4 117 aa13.26□□□□□ -0.29
LMO4-204ENST00000495705 ZNF664Q8N3J9 261 aa13.26□□□□□ -0.29
LMO4-204ENST00000495705 Q8N814 137 aa13.26□□□□□ -0.29
LMO4-204ENST00000495705 BAALCQ8WXS3 180 aa13.26□□□□□ -0.29
LMO4-204ENST00000495705 YPEL4Q96NS1 127 aa13.26□□□□□ -0.29
LMO4-204ENST00000495705 ALKBH7Q9BT30 221 aaPredicted RBP13.26□□□□□ -0.29
LMO4-204ENST00000495705 TRAPPC1Q9Y5R8 145 aa13.26□□□□□ -0.29
LMO4-204ENST00000495705 IGKV3OR2-268A0A0C4DH90 116 aa13.25□□□□□ -0.29
LMO4-204ENST00000495705 C16orf90A8MZG2 172 aa13.25□□□□□ -0.29
LMO4-204ENST00000495705 RPL39P62891 51 aaKnown RBP13.25□□□□□ -0.29
LMO4-204ENST00000495705 ORMDL2Q53FV1 153 aa13.25□□□□□ -0.29
LMO4-204ENST00000495705 KRTAP26-1Q6PEX3 210 aa13.25□□□□□ -0.29
LMO4-204ENST00000495705 NTN5Q8WTR8 489 aaPredicted RBP13.25□□□□□ -0.29
LMO4-204ENST00000495705 WFDC2Q14508 124 aa13.24□□□□□ -0.29
LMO4-204ENST00000495705 CBLN2Q8IUK8 224 aa13.24□□□□□ -0.29
LMO4-204ENST00000495705 SPANXA1Q9NS26 97 aa13.24□□□□□ -0.29
LMO4-204ENST00000495705 LECT2O14960 151 aa13.23□□□□□ -0.29
LMO4-204ENST00000495705 IFI27P40305 119 aaPredicted RBP13.23□□□□□ -0.29
LMO4-204ENST00000495705 C14orf177Q52M58 125 aa13.23□□□□□ -0.29
LMO4-204ENST00000495705 PRSS3P2Q8NHM4 247 aa13.22□□□□□ -0.29
LMO4-204ENST00000495705 G0S2P27469 103 aa13.21□□□□□ -0.29
LMO4-204ENST00000495705 Q6ZUT4 128 aa13.21□□□□□ -0.29
LMO4-204ENST00000495705 CYSLTR1Q9Y271 337 aa13.21□□□□□ -0.29
LMO4-204ENST00000495705 LINC00959A0A1B0GUT2 108 aa13.2□□□□□ -0.3
LMO4-204ENST00000495705 MRPS36P82909 103 aaKnown RBP13.2□□□□□ -0.3
LMO4-204ENST00000495705 SS18Q15532 418 aa13.2□□□□□ -0.3
LMO4-204ENST00000495705 CHCHD10Q8WYQ3 142 aaPredicted RBP13.2□□□□□ -0.3
LMO4-204ENST00000495705 PYGO1Q9Y3Y4 419 aa13.2□□□□□ -0.3
LMO4-204ENST00000495705 DYNC1H1Q14204 4646 aaKnown RBP13.19□□□□□ -0.3
LMO4-204ENST00000495705 USP17L23D6RBM5 183 aa13.19□□□□□ -0.3
LMO4-204ENST00000495705 CCL25O15444 150 aa13.19□□□□□ -0.3
LMO4-204ENST00000495705 C2orf66Q6UXQ4 117 aa13.19□□□□□ -0.3
LMO4-204ENST00000495705 IGLV5-52A0A0A0MRZ9 124 aa13.18□□□□□ -0.3
LMO4-204ENST00000495705 GAGE12HA6NDE8 117 aa13.18□□□□□ -0.3
LMO4-204ENST00000495705 LINC01546A6NGU7 62 aa13.17□□□□□ -0.3
LMO4-204ENST00000495705 C1orf196B1AJZ1 125 aa13.17□□□□□ -0.3
LMO4-204ENST00000495705 RNASE13Q5GAN3 156 aaKnown RBP13.17□□□□□ -0.3
LMO4-204ENST00000495705 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.16□□□□□ -0.3
LMO4-204ENST00000495705 FUSP35637 526 aaKnown RBP eCLIP13.16□□□□□ -0.3
LMO4-204ENST00000495705 FA2HQ7L5A8 372 aa13.16□□□□□ -0.3
LMO4-204ENST00000495705 DNAH5Q8TE73 4624 aa13.16□□□□□ -0.3
LMO4-204ENST00000495705 NPSP0C0P6 89 aa13.15□□□□□ -0.3
LMO4-204ENST00000495705 XCL1P47992 114 aa13.15□□□□□ -0.3
LMO4-204ENST00000495705 C18orf32Q8TCD1 76 aa13.15□□□□□ -0.3
LMO4-204ENST00000495705 FAM104AQ969W3 186 aa13.15□□□□□ -0.3
LMO4-204ENST00000495705 TRAV13-1A0A0B4J241 112 aa13.14□□□□□ -0.31
LMO4-204ENST00000495705 LINC01549A6NIU2 74 aa13.14□□□□□ -0.31
LMO4-204ENST00000495705 TMEM141Q96I45 108 aa13.14□□□□□ -0.31
LMO4-204ENST00000495705 OPRPNQ99935 248 aaPredicted RBP13.14□□□□□ -0.31
LMO4-204ENST00000495705 IGLV4-3A0A075B6K6 122 aa13.13□□□□□ -0.31
LMO4-204ENST00000495705 GCSHP23434 173 aa13.13□□□□□ -0.31
LMO4-204ENST00000495705 FOXI1Q12951 378 aa13.13□□□□□ -0.31
LMO4-204ENST00000495705 CFAP161Q6P656 301 aa13.13□□□□□ -0.31
LMO4-204ENST00000495705 CD164L2Q6UWJ8 174 aa13.13□□□□□ -0.31
LMO4-204ENST00000495705 TOMM6Q96B49 74 aa13.13□□□□□ -0.31
LMO4-204ENST00000495705 IFITM10A6NMD0 228 aa13.12□□□□□ -0.31
LMO4-204ENST00000495705 Q6ZN92 141 aa13.12□□□□□ -0.31
LMO4-204ENST00000495705 AP5S1Q9NUS5 200 aa13.12□□□□□ -0.31
LMO4-204ENST00000495705 PRSS1P07477 247 aa13.11□□□□□ -0.31
LMO4-204ENST00000495705 PAPPA-AS1Q5QFB9 102 aa13.11□□□□□ -0.31
LMO4-204ENST00000495705 TEX43Q6ZNM6 134 aa13.11□□□□□ -0.31
LMO4-204ENST00000495705 TIMM17AQ99595 171 aa13.11□□□□□ -0.31
LMO4-204ENST00000495705 LRP1BQ9NZR2 4599 aa13.1□□□□□ -0.31
LMO4-204ENST00000495705 IGIPA6NJ69 53 aa13.1□□□□□ -0.31
LMO4-204ENST00000495705 RAB5BP61020 215 aa13.1□□□□□ -0.31
LMO4-204ENST00000495705 hDV102S1A0JD36 115 aa13.09□□□□□ -0.31
LMO4-204ENST00000495705 LINC00614P0C842 121 aa13.09□□□□□ -0.31
LMO4-204ENST00000495705 C15orf56Q8N910 161 aa13.09□□□□□ -0.31
LMO4-204ENST00000495705 C2orf88Q9BSF0 95 aa13.09□□□□□ -0.31
LMO4-204ENST00000495705 COLCA2A8K830 154 aa13.08□□□□□ -0.32
LMO4-204ENST00000495705 ERASQ7Z444 233 aa13.08□□□□□ -0.32
LMO4-204ENST00000495705 VCX2Q9H322 139 aa13.08□□□□□ -0.32
LMO4-204ENST00000495705 COX7A2LO14548 114 aa13.07□□□□□ -0.32
LMO4-204ENST00000495705 CDK2AP2O75956 126 aa13.07□□□□□ -0.32
LMO4-204ENST00000495705 KRTAP10-1P60331 282 aa13.07□□□□□ -0.32
LMO4-204ENST00000495705 URB1-AS1Q96HZ7 61 aa13.07□□□□□ -0.32
LMO4-204ENST00000495705 SCGB3A1Q96QR1 104 aa13.07□□□□□ -0.32
LMO4-204ENST00000495705 AMELXQ99217 191 aa13.07□□□□□ -0.32
LMO4-204ENST00000495705 GVQW2A0A096LPI5 108 aaPredicted RBP13.06□□□□□ -0.32
LMO4-204ENST00000495705 IGHV1-58A0A0C4DH39 117 aa13.06□□□□□ -0.32
LMO4-204ENST00000495705 TRGC2P03986 189 aa13.06□□□□□ -0.32
LMO4-204ENST00000495705 KIAA1109Q2LD37 5005 aa13.05□□□□□ -0.32
LMO4-204ENST00000495705 MALP21145 153 aa13.05□□□□□ -0.32
LMO4-204ENST00000495705 CNBPP62633 177 aaKnown RBP13.05□□□□□ -0.32
LMO4-204ENST00000495705 LINC00173Q6ZV60 143 aa13.05□□□□□ -0.32
LMO4-204ENST00000495705 SCO1O75880 301 aa13.04□□□□□ -0.32
LMO4-204ENST00000495705 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.03□□□□□ -0.32
LMO4-204ENST00000495705 HBDP02042 147 aa13.03□□□□□ -0.32
LMO4-204ENST00000495705 UBE2D1P51668 147 aa13.03□□□□□ -0.32
LMO4-204ENST00000495705 HIGD2BQ4VC39 106 aa13.03□□□□□ -0.32
LMO4-204ENST00000495705 IGHV3OR16-9A0A0B4J2B5 98 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms