RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 IMMP2LQ96T52 175 aa6.53□□□□□ -1.36
NUDCD3-210ENST00000493613 GAGE12HA6NDE8 117 aa6.52□□□□□ -1.37
NUDCD3-210ENST00000493613 GATD1Q8NB37 220 aa6.52□□□□□ -1.37
NUDCD3-210ENST00000493613 SPACA4Q8TDM5 124 aa6.52□□□□□ -1.37
NUDCD3-210ENST00000493613 TSKUQ8WUA8 353 aa6.52□□□□□ -1.37
NUDCD3-210ENST00000493613 NAT8BQ9UHF3 227 aa6.52□□□□□ -1.37
NUDCD3-210ENST00000493613 TRAV9-1A0A075B6T8 112 aa6.51□□□□□ -1.37
NUDCD3-210ENST00000493613 FAM231BA6NCW3 169 aa6.51□□□□□ -1.37
NUDCD3-210ENST00000493613 AMMECR1LQ6DCA0 310 aa6.51□□□□□ -1.37
NUDCD3-210ENST00000493613 SMIM15Q7Z3B0 74 aa6.51□□□□□ -1.37
NUDCD3-210ENST00000493613 C15orf56Q8N910 161 aa6.51□□□□□ -1.37
NUDCD3-210ENST00000493613 RPL39LQ96EH5 51 aaKnown RBP6.51□□□□□ -1.37
NUDCD3-210ENST00000493613 CNFNQ9BYD5 112 aa6.51□□□□□ -1.37
NUDCD3-210ENST00000493613 V9GYV3 84 aa6.51□□□□□ -1.37
NUDCD3-210ENST00000493613 PHOX2AO14813 284 aa6.5□□□□□ -1.37
NUDCD3-210ENST00000493613 S100A8P05109 93 aa6.5□□□□□ -1.37
NUDCD3-210ENST00000493613 FOXA3P55318 350 aaPredicted RBP6.5□□□□□ -1.37
NUDCD3-210ENST00000493613 HIGD2BQ4VC39 106 aa6.5□□□□□ -1.37
NUDCD3-210ENST00000493613 RNASEKQ6P5S7 137 aaKnown RBP6.5□□□□□ -1.37
NUDCD3-210ENST00000493613 CFAP161Q6P656 301 aa6.5□□□□□ -1.37
NUDCD3-210ENST00000493613 CBLN2Q8IUK8 224 aa6.5□□□□□ -1.37
NUDCD3-210ENST00000493613 C7orf33Q8WU49 177 aa6.5□□□□□ -1.37
NUDCD3-210ENST00000493613 GTSF1Q8WW33 167 aa6.5□□□□□ -1.37
NUDCD3-210ENST00000493613 PLAC8Q9NZF1 115 aa6.5□□□□□ -1.37
NUDCD3-210ENST00000493613 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.49□□□□□ -1.37
NUDCD3-210ENST00000493613 IGKV2-29A2NJV5 120 aaPredicted RBP6.49□□□□□ -1.37
NUDCD3-210ENST00000493613 HIGD1CA8MV81 97 aa6.49□□□□□ -1.37
NUDCD3-210ENST00000493613 SCO1O75880 301 aa6.49□□□□□ -1.37
NUDCD3-210ENST00000493613 APCSP02743 223 aa6.49□□□□□ -1.37
NUDCD3-210ENST00000493613 RPS10P46783 165 aaKnown RBP6.49□□□□□ -1.37
NUDCD3-210ENST00000493613 COX6A2Q02221 97 aa6.49□□□□□ -1.37
NUDCD3-210ENST00000493613 RIGQ13278 110 aa6.49□□□□□ -1.37
NUDCD3-210ENST00000493613 LCE2DQ5TA82 110 aaPredicted RBP6.49□□□□□ -1.37
NUDCD3-210ENST00000493613 CHCHD10Q8WYQ3 142 aaPredicted RBP6.49□□□□□ -1.37
NUDCD3-210ENST00000493613 A0A1B0GW15 77 aa6.48□□□□□ -1.37
NUDCD3-210ENST00000493613 SMIM27A0A1W2PRY6 76 aa6.48□□□□□ -1.37
NUDCD3-210ENST00000493613 NCR2O95944 276 aa6.48□□□□□ -1.37
NUDCD3-210ENST00000493613 FGF6P10767 208 aa6.48□□□□□ -1.37
NUDCD3-210ENST00000493613 COX19Q49B96 90 aa6.48□□□□□ -1.37
NUDCD3-210ENST00000493613 PRSS3P2Q8NHM4 247 aa6.48□□□□□ -1.37
NUDCD3-210ENST00000493613 IGKV2-24A0A0C4DH68 120 aa6.47□□□□□ -1.37
NUDCD3-210ENST00000493613 A0A1B0GUT8 65 aa6.47□□□□□ -1.37
NUDCD3-210ENST00000493613 SDHAF1A6NFY7 115 aa6.47□□□□□ -1.37
NUDCD3-210ENST00000493613 PMCHP20382 165 aa6.47□□□□□ -1.37
NUDCD3-210ENST00000493613 MAJINQ3KP22 176 aa6.47□□□□□ -1.37
NUDCD3-210ENST00000493613 ATP5L2Q7Z4Y8 100 aa6.47□□□□□ -1.37
NUDCD3-210ENST00000493613 GVQW2A0A096LPI5 108 aaPredicted RBP6.46□□□□□ -1.38
NUDCD3-210ENST00000493613 H7C423 109 aa6.46□□□□□ -1.38
NUDCD3-210ENST00000493613 I3L3M4 83 aa6.46□□□□□ -1.38
NUDCD3-210ENST00000493613 XCL1P47992 114 aa6.46□□□□□ -1.38
NUDCD3-210ENST00000493613 STPG4Q8N801 248 aa6.46□□□□□ -1.38
NUDCD3-210ENST00000493613 NUP35Q8NFH5 326 aa6.46□□□□□ -1.38
NUDCD3-210ENST00000493613 TRBV24-1A0A075B6N3 115 aa6.45□□□□□ -1.38
NUDCD3-210ENST00000493613 A0A096LNI7 61 aa6.45□□□□□ -1.38
NUDCD3-210ENST00000493613 TGIF2-C20orf24A0A0A6YYL0 155 aa6.45□□□□□ -1.38
NUDCD3-210ENST00000493613 GAS8-AS1O95177 125 aa6.45□□□□□ -1.38
NUDCD3-210ENST00000493613 ZNF25P17030 456 aaPredicted RBP6.45□□□□□ -1.38
NUDCD3-210ENST00000493613 CAMPP49913 170 aa6.45□□□□□ -1.38
NUDCD3-210ENST00000493613 HBBP68871 147 aa6.45□□□□□ -1.38
NUDCD3-210ENST00000493613 PRR3P79522 188 aaKnown RBP6.45□□□□□ -1.38
NUDCD3-210ENST00000493613 FOXI1Q12951 378 aa6.45□□□□□ -1.38
NUDCD3-210ENST00000493613 MRPL54Q6P161 138 aaKnown RBP6.45□□□□□ -1.38
NUDCD3-210ENST00000493613 OR5A1Q8NGJ0 315 aa6.45□□□□□ -1.38
NUDCD3-210ENST00000493613 TMEM101Q96IK0 257 aa6.45□□□□□ -1.38
NUDCD3-210ENST00000493613 TNXBP22105 4242 aa6.45□□□□□ -1.38
NUDCD3-210ENST00000493613 TRBV6-5A0A0K0K1A5 114 aa6.44□□□□□ -1.38
NUDCD3-210ENST00000493613 MT-ND6P03923 174 aa6.44□□□□□ -1.38
NUDCD3-210ENST00000493613 RAB5AP20339 215 aa6.44□□□□□ -1.38
NUDCD3-210ENST00000493613 LINC00526Q96FQ7 95 aa6.44□□□□□ -1.38
NUDCD3-210ENST00000493613 ST20Q9HBF5 79 aa6.44□□□□□ -1.38
NUDCD3-210ENST00000493613 LINC00959A0A1B0GUT2 108 aa6.43□□□□□ -1.38
NUDCD3-210ENST00000493613 CCL25O15444 150 aa6.43□□□□□ -1.38
NUDCD3-210ENST00000493613 TSHBP01222 138 aa6.43□□□□□ -1.38
NUDCD3-210ENST00000493613 MRAP2Q96G30 205 aa6.43□□□□□ -1.38
NUDCD3-210ENST00000493613 LINC01600Q96MT4 127 aa6.43□□□□□ -1.38
NUDCD3-210ENST00000493613 LINC00474Q9P2X8 69 aa6.43□□□□□ -1.38
NUDCD3-210ENST00000493613 PKIGQ9Y2B9 76 aa6.43□□□□□ -1.38
NUDCD3-210ENST00000493613 TRAPPC1Q9Y5R8 145 aa6.43□□□□□ -1.38
NUDCD3-210ENST00000493613 IGHV1-58A0A0C4DH39 117 aa6.42□□□□□ -1.38
NUDCD3-210ENST00000493613 COLCA2A8K830 154 aa6.42□□□□□ -1.38
NUDCD3-210ENST00000493613 ESDP10768 282 aa6.42□□□□□ -1.38
NUDCD3-210ENST00000493613 SS18Q15532 418 aa6.42□□□□□ -1.38
NUDCD3-210ENST00000493613 GNB1LQ9BYB4 327 aa6.42□□□□□ -1.38
NUDCD3-210ENST00000493613 C1orf196B1AJZ1 125 aa6.41□□□□□ -1.38
NUDCD3-210ENST00000493613 RAB4AP20338 218 aa6.41□□□□□ -1.38
NUDCD3-210ENST00000493613 FABP9Q0Z7S8 132 aa6.41□□□□□ -1.38
NUDCD3-210ENST00000493613 AMN1Q8IY45 258 aa6.41□□□□□ -1.38
NUDCD3-210ENST00000493613 CARD19Q96LW7 228 aa6.41□□□□□ -1.38
NUDCD3-210ENST00000493613 TMEM191AQ9H0A3 160 aa6.41□□□□□ -1.38
NUDCD3-210ENST00000493613 CDC42SE2Q9NRR3 84 aa6.41□□□□□ -1.38
NUDCD3-210ENST00000493613 ZNF561-AS1K7EIQ3 104 aa6.4□□□□□ -1.38
NUDCD3-210ENST00000493613 POLR2KP53803 58 aaKnown RBP6.4□□□□□ -1.38
NUDCD3-210ENST00000493613 RAB5BP61020 215 aa6.4□□□□□ -1.38
NUDCD3-210ENST00000493613 ODF1Q14990 250 aa6.4□□□□□ -1.38
NUDCD3-210ENST00000493613 CD164L2Q6UWJ8 174 aa6.4□□□□□ -1.38
NUDCD3-210ENST00000493613 ZNF664Q8N3J9 261 aa6.4□□□□□ -1.38
NUDCD3-210ENST00000493613 YPEL4Q96NS1 127 aa6.4□□□□□ -1.38
NUDCD3-210ENST00000493613 MRPL18Q9H0U6 180 aaKnown RBP6.4□□□□□ -1.38
NUDCD3-210ENST00000493613 LRP2P98164 4655 aa6.39□□□□□ -1.39
NUDCD3-210ENST00000493613 RNF213Q63HN8 5207 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms