RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 MAPKAPK5-AS1Q8N8E1 139 aa7.33□□□□□ -1.24
CPSF7-212ENST00000489728 Q8N8P6 123 aa7.33□□□□□ -1.24
CPSF7-212ENST00000489728 NXT2Q9NPJ8 142 aaKnown RBP7.33□□□□□ -1.24
CPSF7-212ENST00000489728 SPANXA1Q9NS26 97 aa7.33□□□□□ -1.24
CPSF7-212ENST00000489728 UBE2D4Q9Y2X8 147 aa7.33□□□□□ -1.24
CPSF7-212ENST00000489728 DNAH11Q96DT5 4516 aa7.32□□□□□ -1.24
CPSF7-212ENST00000489728 CCL25O15444 150 aa7.32□□□□□ -1.24
CPSF7-212ENST00000489728 DGAT2L7PQ6IED9 249 aa7.32□□□□□ -1.24
CPSF7-212ENST00000489728 CDC42SE2Q9NRR3 84 aa7.32□□□□□ -1.24
CPSF7-212ENST00000489728 G0S2P27469 103 aa7.31□□□□□ -1.24
CPSF7-212ENST00000489728 ORMDL2Q53FV1 153 aa7.31□□□□□ -1.24
CPSF7-212ENST00000489728 ZNF664Q8N3J9 261 aa7.31□□□□□ -1.24
CPSF7-212ENST00000489728 BAALCQ8WXS3 180 aa7.31□□□□□ -1.24
CPSF7-212ENST00000489728 DYNC1H1Q14204 4646 aaKnown RBP7.3□□□□□ -1.24
CPSF7-212ENST00000489728 NPSP0C0P6 89 aa7.3□□□□□ -1.24
CPSF7-212ENST00000489728 MRPS36P82909 103 aaKnown RBP7.3□□□□□ -1.24
CPSF7-212ENST00000489728 WFDC2Q14508 124 aa7.3□□□□□ -1.24
CPSF7-212ENST00000489728 SLC7A5P1Q8MH63 180 aa7.3□□□□□ -1.24
CPSF7-212ENST00000489728 ALKBH7Q9BT30 221 aaPredicted RBP7.3□□□□□ -1.24
CPSF7-212ENST00000489728 MRPL18Q9H0U6 180 aaKnown RBP7.3□□□□□ -1.24
CPSF7-212ENST00000489728 PYGO1Q9Y3Y4 419 aa7.3□□□□□ -1.24
CPSF7-212ENST00000489728 IGLV5-52A0A0A0MRZ9 124 aa7.29□□□□□ -1.24
CPSF7-212ENST00000489728 TGIF2-C20orf24A0A0A6YYL0 155 aa7.29□□□□□ -1.24
CPSF7-212ENST00000489728 LINC01549A6NIU2 74 aa7.29□□□□□ -1.24
CPSF7-212ENST00000489728 CDK2AP2O75956 126 aa7.29□□□□□ -1.24
CPSF7-212ENST00000489728 YPEL4Q96NS1 127 aa7.29□□□□□ -1.24
CPSF7-212ENST00000489728 SMCO4Q9NRQ5 59 aa7.29□□□□□ -1.24
CPSF7-212ENST00000489728 IGLV10-54A0A075B6I4 117 aa7.28□□□□□ -1.24
CPSF7-212ENST00000489728 LOC389332A0A1B0GUA5 103 aa7.28□□□□□ -1.24
CPSF7-212ENST00000489728 LINC00959A0A1B0GUT2 108 aa7.28□□□□□ -1.24
CPSF7-212ENST00000489728 LINC01546A6NGU7 62 aa7.28□□□□□ -1.24
CPSF7-212ENST00000489728 C1orf196B1AJZ1 125 aa7.28□□□□□ -1.24
CPSF7-212ENST00000489728 USP17L23D6RBM5 183 aa7.28□□□□□ -1.24
CPSF7-212ENST00000489728 LECT2O14960 151 aa7.28□□□□□ -1.24
CPSF7-212ENST00000489728 IFI27P40305 119 aaPredicted RBP7.28□□□□□ -1.24
CPSF7-212ENST00000489728 RPL39P62891 51 aaKnown RBP7.28□□□□□ -1.24
CPSF7-212ENST00000489728 FABP9Q0Z7S8 132 aa7.28□□□□□ -1.24
CPSF7-212ENST00000489728 SS18Q15532 418 aa7.28□□□□□ -1.24
CPSF7-212ENST00000489728 KIAA1644Q3SXP7 199 aa7.28□□□□□ -1.24
CPSF7-212ENST00000489728 CHCHD10Q8WYQ3 142 aaPredicted RBP7.28□□□□□ -1.24
CPSF7-212ENST00000489728 CYSLTR1Q9Y271 337 aa7.28□□□□□ -1.24
CPSF7-212ENST00000489728 GCSHP23434 173 aa7.27□□□□□ -1.25
CPSF7-212ENST00000489728 CFAP161Q6P656 301 aa7.27□□□□□ -1.25
CPSF7-212ENST00000489728 Q6ZUT4 128 aa7.27□□□□□ -1.25
CPSF7-212ENST00000489728 TRAPPC1Q9Y5R8 145 aa7.27□□□□□ -1.25
CPSF7-212ENST00000489728 IGKV3OR2-268A0A0C4DH90 116 aa7.26□□□□□ -1.25
CPSF7-212ENST00000489728 GAGE12HA6NDE8 117 aa7.26□□□□□ -1.25
CPSF7-212ENST00000489728 FOXI1Q12951 378 aa7.26□□□□□ -1.25
CPSF7-212ENST00000489728 CD164L2Q6UWJ8 174 aa7.26□□□□□ -1.25
CPSF7-212ENST00000489728 C2orf66Q6UXQ4 117 aa7.26□□□□□ -1.25
CPSF7-212ENST00000489728 PRSS3P2Q8NHM4 247 aa7.26□□□□□ -1.25
CPSF7-212ENST00000489728 PAPPA-AS1Q5QFB9 102 aa7.25□□□□□ -1.25
CPSF7-212ENST00000489728 FAM104AQ969W3 186 aa7.25□□□□□ -1.25
CPSF7-212ENST00000489728 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.24□□□□□ -1.25
CPSF7-212ENST00000489728 IGLV4-3A0A075B6K6 122 aa7.24□□□□□ -1.25
CPSF7-212ENST00000489728 XCL1P47992 114 aa7.24□□□□□ -1.25
CPSF7-212ENST00000489728 CNBPP62633 177 aaKnown RBP7.24□□□□□ -1.25
CPSF7-212ENST00000489728 Q6ZN92 141 aa7.24□□□□□ -1.25
CPSF7-212ENST00000489728 CBLN2Q8IUK8 224 aa7.24□□□□□ -1.25
CPSF7-212ENST00000489728 TOMM6Q96B49 74 aa7.24□□□□□ -1.25
CPSF7-212ENST00000489728 TMEM141Q96I45 108 aa7.24□□□□□ -1.25
CPSF7-212ENST00000489728 TIMM17AQ99595 171 aa7.24□□□□□ -1.25
CPSF7-212ENST00000489728 DNAH5Q8TE73 4624 aa7.23□□□□□ -1.25
CPSF7-212ENST00000489728 GVQW2A0A096LPI5 108 aaPredicted RBP7.23□□□□□ -1.25
CPSF7-212ENST00000489728 IGIPA6NJ69 53 aa7.23□□□□□ -1.25
CPSF7-212ENST00000489728 IFITM10A6NMD0 228 aa7.23□□□□□ -1.25
CPSF7-212ENST00000489728 PRSS1P07477 247 aa7.23□□□□□ -1.25
CPSF7-212ENST00000489728 FA2HQ7L5A8 372 aa7.23□□□□□ -1.25
CPSF7-212ENST00000489728 C15orf56Q8N910 161 aa7.23□□□□□ -1.25
CPSF7-212ENST00000489728 C2orf88Q9BSF0 95 aa7.23□□□□□ -1.25
CPSF7-212ENST00000489728 AP5S1Q9NUS5 200 aa7.23□□□□□ -1.25
CPSF7-212ENST00000489728 LRP1BQ9NZR2 4599 aa7.23□□□□□ -1.25
CPSF7-212ENST00000489728 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.22□□□□□ -1.25
CPSF7-212ENST00000489728 TRAV13-1A0A0B4J241 112 aa7.22□□□□□ -1.25
CPSF7-212ENST00000489728 IGHV1-58A0A0C4DH39 117 aa7.22□□□□□ -1.25
CPSF7-212ENST00000489728 hDV102S1A0JD36 115 aa7.22□□□□□ -1.25
CPSF7-212ENST00000489728 COX7A2LO14548 114 aa7.22□□□□□ -1.25
CPSF7-212ENST00000489728 KRTAP10-1P60331 282 aa7.22□□□□□ -1.25
CPSF7-212ENST00000489728 RAB5BP61020 215 aa7.22□□□□□ -1.25
CPSF7-212ENST00000489728 RNASE13Q5GAN3 156 aaKnown RBP7.22□□□□□ -1.25
CPSF7-212ENST00000489728 TEX43Q6ZNM6 134 aa7.22□□□□□ -1.25
CPSF7-212ENST00000489728 ERASQ7Z444 233 aa7.22□□□□□ -1.25
CPSF7-212ENST00000489728 C18orf32Q8TCD1 76 aa7.22□□□□□ -1.25
CPSF7-212ENST00000489728 KIAA1109Q2LD37 5005 aa7.22□□□□□ -1.25
CPSF7-212ENST00000489728 FUSP35637 526 aaKnown RBP eCLIP7.21□□□□□ -1.26
CPSF7-212ENST00000489728 Q6ZSA8 131 aa7.21□□□□□ -1.26
CPSF7-212ENST00000489728 AMELXQ99217 191 aa7.21□□□□□ -1.26
CPSF7-212ENST00000489728 APOMO95445 188 aa7.2□□□□□ -1.26
CPSF7-212ENST00000489728 LINC00614P0C842 121 aa7.2□□□□□ -1.26
CPSF7-212ENST00000489728 MALP21145 153 aa7.2□□□□□ -1.26
CPSF7-212ENST00000489728 SEC11AP67812 179 aa7.2□□□□□ -1.26
CPSF7-212ENST00000489728 FAM19A3Q7Z5A8 133 aa7.2□□□□□ -1.26
CPSF7-212ENST00000489728 C9orf163Q8N9P6 203 aa7.2□□□□□ -1.26
CPSF7-212ENST00000489728 OPRPNQ99935 248 aaPredicted RBP7.2□□□□□ -1.26
CPSF7-212ENST00000489728 VCX2Q9H322 139 aa7.2□□□□□ -1.26
CPSF7-212ENST00000489728 HERC2O95714 4834 aa7.2□□□□□ -1.26
CPSF7-212ENST00000489728 IGHV3OR16-9A0A0B4J2B5 98 aa7.19□□□□□ -1.26
CPSF7-212ENST00000489728 UBE2D1P51668 147 aa7.19□□□□□ -1.26
CPSF7-212ENST00000489728 LINC00173Q6ZV60 143 aa7.19□□□□□ -1.26
CPSF7-212ENST00000489728 SCGB3A1Q96QR1 104 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms