RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 ABCA1O95477 2261 aa0.62□□□□□ -2.31
NF1-213ENST00000489712 ABCA3Q99758 1704 aa0.62□□□□□ -2.31
NF1-213ENST00000489712 MGPP08493 103 aa0.62□□□□□ -2.31
NF1-213ENST00000489712 NMBP08949 121 aa0.62□□□□□ -2.31
NF1-213ENST00000489712 SPATA8Q6RVD6 105 aa0.62□□□□□ -2.31
NF1-213ENST00000489712 PMCHL2Q9BQD1 86 aa0.62□□□□□ -2.31
NF1-213ENST00000489712 NXT2Q9NPJ8 142 aaKnown RBP0.62□□□□□ -2.31
NF1-213ENST00000489712 LINC01558Q9Y6Z2 57 aa0.62□□□□□ -2.31
NF1-213ENST00000489712 ARL2-SNX15V9GYD0 113 aa0.62□□□□□ -2.31
NF1-213ENST00000489712 ZMYM4Q5VZL5 1548 aa0.62□□□□□ -2.31
NF1-213ENST00000489712 KNTC1P50748 2209 aa0.61□□□□□ -2.31
NF1-213ENST00000489712 SHROOM2Q13796 1616 aa0.61□□□□□ -2.31
NF1-213ENST00000489712 TRAV22A0A0B4J277 110 aa0.61□□□□□ -2.31
NF1-213ENST00000489712 hADV29S1A0JD25 119 aa0.61□□□□□ -2.31
NF1-213ENST00000489712 ATOX1O00244 68 aa0.61□□□□□ -2.31
NF1-213ENST00000489712 UBE2D3P61077 147 aa0.61□□□□□ -2.31
NF1-213ENST00000489712 UBE2D2P62837 147 aa0.61□□□□□ -2.31
NF1-213ENST00000489712 UBA52P62987 128 aaKnown RBP0.61□□□□□ -2.31
NF1-213ENST00000489712 HAMPP81172 84 aa0.61□□□□□ -2.31
NF1-213ENST00000489712 COX6A2Q02221 97 aa0.61□□□□□ -2.31
NF1-213ENST00000489712 VAMP8Q9BV40 100 aa0.61□□□□□ -2.31
NF1-213ENST00000489712 Q9H521 79 aa0.61□□□□□ -2.31
NF1-213ENST00000489712 CDC42SE2Q9NRR3 84 aa0.61□□□□□ -2.31
NF1-213ENST00000489712 TET3O43151 1660 aa0.61□□□□□ -2.31
NF1-213ENST00000489712 TOPAZ1Q8N9V7 1692 aa0.61□□□□□ -2.31
NF1-213ENST00000489712 DOCK11Q5JSL3 2073 aa0.61□□□□□ -2.31
NF1-213ENST00000489712 SSC5DA1L4H1 1573 aa0.61□□□□□ -2.31
NF1-213ENST00000489712 LRRC37A2A6NM11 1700 aa0.61□□□□□ -2.31
NF1-213ENST00000489712 GAPVD1Q14C86 1478 aa0.61□□□□□ -2.31
NF1-213ENST00000489712 TEX14Q8IWB6 1497 aa0.61□□□□□ -2.31
NF1-213ENST00000489712 SHANK2Q9UPX8 1470 aa0.61□□□□□ -2.31
NF1-213ENST00000489712 ASH1LQ9NR48 2969 aaKnown RBP0.6□□□□□ -2.31
NF1-213ENST00000489712 F5P12259 2224 aa0.6□□□□□ -2.31
NF1-213ENST00000489712 KDM5AP29375 1690 aaKnown RBP0.6□□□□□ -2.31
NF1-213ENST00000489712 MYOM1P52179 1685 aa0.6□□□□□ -2.31
NF1-213ENST00000489712 KIF21AQ7Z4S6 1674 aa0.6□□□□□ -2.31
NF1-213ENST00000489712 A0A1B0GWA3 101 aa0.6□□□□□ -2.31
NF1-213ENST00000489712 MPC2O95563 127 aa0.6□□□□□ -2.31
NF1-213ENST00000489712 SAA2P0DJI9 122 aaPredicted RBP0.6□□□□□ -2.31
NF1-213ENST00000489712 PRB3Q04118 309 aaPredicted RBP0.6□□□□□ -2.31
NF1-213ENST00000489712 SFTA2Q6UW10 78 aa0.6□□□□□ -2.31
NF1-213ENST00000489712 FAM103A1Q9BTL3 118 aaKnown RBP0.6□□□□□ -2.31
NF1-213ENST00000489712 NSD3Q9BZ95 1437 aa0.6□□□□□ -2.31
NF1-213ENST00000489712 ABCC5O15440 1437 aa0.59□□□□□ -2.31
NF1-213ENST00000489712 A0A0D9SFI3 127 aa0.59□□□□□ -2.31
NF1-213ENST00000489712 G3V318 75 aa0.59□□□□□ -2.31
NF1-213ENST00000489712 MT-ATP8P03928 68 aa0.59□□□□□ -2.31
NF1-213ENST00000489712 IGLC1P0CG04 106 aa0.59□□□□□ -2.31
NF1-213ENST00000489712 FAM223AQ8IWN6 122 aa0.59□□□□□ -2.31
NF1-213ENST00000489712 TOP2BQ02880 1626 aa0.59□□□□□ -2.32
NF1-213ENST00000489712 SBF2Q86WG5 1849 aa0.59□□□□□ -2.32
NF1-213ENST00000489712 UNC13BO14795 1591 aa0.58□□□□□ -2.32
NF1-213ENST00000489712 SMARCA2P51531 1590 aa0.58□□□□□ -2.32
NF1-213ENST00000489712 AKAP12Q02952 1782 aa0.58□□□□□ -2.32
NF1-213ENST00000489712 RAPGEF6Q8TEU7 1601 aa0.58□□□□□ -2.32
NF1-213ENST00000489712 ZNF815PA8K554 130 aa0.58□□□□□ -2.32
NF1-213ENST00000489712 PMCHL1Q16048 86 aa0.58□□□□□ -2.32
NF1-213ENST00000489712 Q6JHZ5 121 aa0.58□□□□□ -2.32
NF1-213ENST00000489712 SSBP3-AS1Q7Z2R9 100 aa0.58□□□□□ -2.32
NF1-213ENST00000489712 TRGV9Q99603 122 aa0.58□□□□□ -2.32
NF1-213ENST00000489712 PRO1933Q9H354 126 aa0.58□□□□□ -2.32
NF1-213ENST00000489712 ABCC10Q5T3U5 1492 aa0.58□□□□□ -2.32
NF1-213ENST00000489712 EHBP1L1Q8N3D4 1523 aa0.58□□□□□ -2.32
NF1-213ENST00000489712 CHD1O14646 1710 aa0.58□□□□□ -2.32
NF1-213ENST00000489712 DIP2CQ9Y2E4 1556 aa0.57□□□□□ -2.32
NF1-213ENST00000489712 WNK3Q9BYP7 1800 aa0.57□□□□□ -2.32
NF1-213ENST00000489712 MLH3Q9UHC1 1453 aa0.57□□□□□ -2.32
NF1-213ENST00000489712 UQCRHLA0A096LP55 91 aa0.57□□□□□ -2.32
NF1-213ENST00000489712 A0A0G2JND7 137 aa0.57□□□□□ -2.32
NF1-213ENST00000489712 M0R3E3 92 aa0.57□□□□□ -2.32
NF1-213ENST00000489712 UQCRHP07919 91 aa0.57□□□□□ -2.32
NF1-213ENST00000489712 FAUP35544 74 aaKnown RBP0.57□□□□□ -2.32
NF1-213ENST00000489712 ASIPP42127 132 aa0.57□□□□□ -2.32
NF1-213ENST00000489712 SERP2Q8N6R1 65 aa0.57□□□□□ -2.32
NF1-213ENST00000489712 TMEM263Q8WUH6 116 aaKnown RBP0.57□□□□□ -2.32
NF1-213ENST00000489712 SNHG12Q9BXW3 62 aa0.57□□□□□ -2.32
NF1-213ENST00000489712 PLAC8Q9NZF1 115 aa0.57□□□□□ -2.32
NF1-213ENST00000489712 CACFD1Q9UGQ2 172 aa0.57□□□□□ -2.32
NF1-213ENST00000489712 SPCS1Q9Y6A9 102 aa0.57□□□□□ -2.32
NF1-213ENST00000489712 V9GYS6 101 aa0.57□□□□□ -2.32
NF1-213ENST00000489712 HMGXB3Q12766 1538 aa0.57□□□□□ -2.32
NF1-213ENST00000489712 ERCC6L2Q5T890 1561 aa0.57□□□□□ -2.32
NF1-213ENST00000489712 BAZ1AQ9NRL2 1556 aaPredicted RBP0.57□□□□□ -2.32
NF1-213ENST00000489712 MUC5ACP98088 5654 aa0.57□□□□□ -2.32
NF1-213ENST00000489712 ZNF236Q9UL36 1845 aa0.57□□□□□ -2.32
NF1-213ENST00000489712 ANKRD36BQ8N2N9 1353 aa0.57□□□□□ -2.32
NF1-213ENST00000489712 MAGI1Q96QZ7 1491 aaPredicted RBP0.56□□□□□ -2.32
NF1-213ENST00000489712 PRDM15P57071 1507 aaPredicted RBP0.56□□□□□ -2.32
NF1-213ENST00000489712 FAM223BA6NKX1 122 aa0.56□□□□□ -2.32
NF1-213ENST00000489712 GYPAP02724 150 aa0.56□□□□□ -2.32
NF1-213ENST00000489712 PSMG4Q5JS54 123 aa0.56□□□□□ -2.32
NF1-213ENST00000489712 FDCSPQ8NFU4 85 aa0.56□□□□□ -2.32
NF1-213ENST00000489712 KDM3BQ7LBC6 1761 aa0.55□□□□□ -2.32
NF1-213ENST00000489712 TRBV25-1A0A075B6N4 114 aa0.55□□□□□ -2.32
NF1-213ENST00000489712 ZNF720Q7Z2F6 126 aa0.55□□□□□ -2.32
NF1-213ENST00000489712 CNFNQ9BYD5 112 aa0.55□□□□□ -2.32
NF1-213ENST00000489712 LINC00472Q9H8W2 130 aa0.55□□□□□ -2.32
NF1-213ENST00000489712 NAV3Q8IVL0 2385 aa0.55□□□□□ -2.32
NF1-213ENST00000489712 ANKRD26Q9UPS8 1709 aa0.55□□□□□ -2.32
NF1-213ENST00000489712 BTAF1O14981 1849 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms