RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 HHLA3Q9XRX5 114 aa2.02□□□□□ -2.09
CALD1-221ENST00000489019 LAMA5O15230 3695 aa2.02□□□□□ -2.09
CALD1-221ENST00000489019 HIVEP3Q5T1R4 2406 aa2.02□□□□□ -2.09
CALD1-221ENST00000489019 ABCA2Q9BZC7 2435 aa2.01□□□□□ -2.09
CALD1-221ENST00000489019 SMG1Q96Q15 3661 aaKnown RBP2.01□□□□□ -2.09
CALD1-221ENST00000489019 TRBV25-1A0A075B6N4 114 aa2.01□□□□□ -2.09
CALD1-221ENST00000489019 IGHV3-64A0A075B6Q5 118 aa2.01□□□□□ -2.09
CALD1-221ENST00000489019 LOC100131303A0A0U1RQF7 123 aa2.01□□□□□ -2.09
CALD1-221ENST00000489019 IGIPA6NJ69 53 aa2.01□□□□□ -2.09
CALD1-221ENST00000489019 C11orf86A6NJI1 115 aa2.01□□□□□ -2.09
CALD1-221ENST00000489019 A8MTW9 85 aa2.01□□□□□ -2.09
CALD1-221ENST00000489019 H3BUT2 72 aa2.01□□□□□ -2.09
CALD1-221ENST00000489019 ZZEF1O43149 2961 aa2.01□□□□□ -2.09
CALD1-221ENST00000489019 LY6G6DO95868 133 aa2.01□□□□□ -2.09
CALD1-221ENST00000489019 IGHV3-53P01767 116 aa2.01□□□□□ -2.09
CALD1-221ENST00000489019 P0DMU3 169 aa2.01□□□□□ -2.09
CALD1-221ENST00000489019 FAM231AP0DMU4 169 aa2.01□□□□□ -2.09
CALD1-221ENST00000489019 FAM231CP0DMU5 169 aa2.01□□□□□ -2.09
CALD1-221ENST00000489019 COTL1Q14019 142 aa2.01□□□□□ -2.09
CALD1-221ENST00000489019 RRN3P1Q2M238 152 aa2.01□□□□□ -2.09
CALD1-221ENST00000489019 CFAP126Q5VTH2 177 aa2.01□□□□□ -2.09
CALD1-221ENST00000489019 MORN3Q6PF18 240 aaPredicted RBP2.01□□□□□ -2.09
CALD1-221ENST00000489019 NDUFA11Q86Y39 141 aa2.01□□□□□ -2.09
CALD1-221ENST00000489019 C1orf158Q8N1D5 194 aa2.01□□□□□ -2.09
CALD1-221ENST00000489019 C20orf203Q8NBC4 194 aa2.01□□□□□ -2.09
CALD1-221ENST00000489019 C11orf72Q8NBR9 251 aa2.01□□□□□ -2.09
CALD1-221ENST00000489019 ZNRF2Q8NHG8 242 aa2.01□□□□□ -2.09
CALD1-221ENST00000489019 PTH2Q96A98 100 aa2.01□□□□□ -2.09
CALD1-221ENST00000489019 C16orf74Q96GX8 76 aa2.01□□□□□ -2.09
CALD1-221ENST00000489019 SMR3AQ99954 134 aa2.01□□□□□ -2.09
CALD1-221ENST00000489019 NAA38Q9BRA0 125 aaKnown RBP2.01□□□□□ -2.09
CALD1-221ENST00000489019 PRADC1Q9BSG0 188 aa2.01□□□□□ -2.09
CALD1-221ENST00000489019 OCR1Q9BZK8 76 aa2.01□□□□□ -2.09
CALD1-221ENST00000489019 CST9LQ9H4G1 147 aa2.01□□□□□ -2.09
CALD1-221ENST00000489019 EDA2RQ9HAV5 297 aa2.01□□□□□ -2.09
CALD1-221ENST00000489019 RETNQ9HD89 108 aa2.01□□□□□ -2.09
CALD1-221ENST00000489019 NHP2Q9NX24 153 aaKnown RBP2.01□□□□□ -2.09
CALD1-221ENST00000489019 IGF2RP11717 2491 aa2.01□□□□□ -2.09
CALD1-221ENST00000489019 PRRC2CQ9Y520 2896 aaKnown RBP2□□□□□ -2.09
CALD1-221ENST00000489019 CACNA1BQ00975 2339 aa2□□□□□ -2.09
CALD1-221ENST00000489019 HRNRQ86YZ3 2850 aaPredicted RBP2□□□□□ -2.09
CALD1-221ENST00000489019 IGLV4-69A0A075B6H9 119 aa2□□□□□ -2.09
CALD1-221ENST00000489019 IGLV4-3A0A075B6K6 122 aa2□□□□□ -2.09
CALD1-221ENST00000489019 TRGV2A0A075B6R0 118 aa2□□□□□ -2.09
CALD1-221ENST00000489019 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2□□□□□ -2.09
CALD1-221ENST00000489019 TRAV4A0A0B4J268 109 aa2□□□□□ -2.09
CALD1-221ENST00000489019 TRGV4A0A0C4DH28 118 aa2□□□□□ -2.09
CALD1-221ENST00000489019 A0A0J9YXV3 536 aa2□□□□□ -2.09
CALD1-221ENST00000489019 TMEM223A0PJW6 202 aa2□□□□□ -2.09
CALD1-221ENST00000489019 IGKV2-29A2NJV5 120 aaPredicted RBP2□□□□□ -2.09
CALD1-221ENST00000489019 J3QQQ9 107 aa2□□□□□ -2.09
CALD1-221ENST00000489019 K7EP34 96 aa2□□□□□ -2.09
CALD1-221ENST00000489019 UBE2L6O14933 153 aa2□□□□□ -2.09
CALD1-221ENST00000489019 LEPROTO15243 131 aa2□□□□□ -2.09
CALD1-221ENST00000489019 CCL25O15444 150 aa2□□□□□ -2.09
CALD1-221ENST00000489019 IGLV1-51P01701 117 aa2□□□□□ -2.09
CALD1-221ENST00000489019 FABP2P12104 132 aa2□□□□□ -2.09
CALD1-221ENST00000489019 FXYD2P54710 66 aa2□□□□□ -2.09
CALD1-221ENST00000489019 SMAGPQ0VAQ4 97 aa2□□□□□ -2.09
CALD1-221ENST00000489019 TMEM263Q8WUH6 116 aaKnown RBP2□□□□□ -2.09
CALD1-221ENST00000489019 PLEKHB2Q96CS7 222 aa2□□□□□ -2.09
CALD1-221ENST00000489019 TMEM101Q96IK0 257 aa2□□□□□ -2.09
CALD1-221ENST00000489019 CHCHD5Q9BSY4 110 aa2□□□□□ -2.09
CALD1-221ENST00000489019 TIMM21Q9BVV7 248 aa2□□□□□ -2.09
CALD1-221ENST00000489019 WFDC10AQ9H1F0 79 aa2□□□□□ -2.09
CALD1-221ENST00000489019 NOP10Q9NPE3 64 aaKnown RBP2□□□□□ -2.09
CALD1-221ENST00000489019 SPANXA1Q9NS26 97 aa2□□□□□ -2.09
CALD1-221ENST00000489019 SPCS1Q9Y6A9 102 aa2□□□□□ -2.09
CALD1-221ENST00000489019 TLN1Q9Y490 2541 aaKnown RBP2□□□□□ -2.09
CALD1-221ENST00000489019 PRRC2AP48634 2157 aaKnown RBP2□□□□□ -2.09
CALD1-221ENST00000489019 MAP1BP46821 2468 aaKnown RBP2□□□□□ -2.09
CALD1-221ENST00000489019 ADGRG4Q8IZF6 3080 aa2□□□□□ -2.09
CALD1-221ENST00000489019 KALRNO60229 2985 aa2□□□□□ -2.09
CALD1-221ENST00000489019 LRBAP50851 2863 aa2□□□□□ -2.09
CALD1-221ENST00000489019 ABCA1O95477 2261 aa2□□□□□ -2.09
CALD1-221ENST00000489019 ATRXP46100 2492 aa1.99□□□□□ -2.09
CALD1-221ENST00000489019 SPTA1P02549 2419 aa1.99□□□□□ -2.09
CALD1-221ENST00000489019 TPRP12270 2363 aaKnown RBP1.99□□□□□ -2.09
CALD1-221ENST00000489019 TRBV7-3A0A075B6L6 115 aa1.99□□□□□ -2.09
CALD1-221ENST00000489019 TRBV10-1A0A0K0K1A3 114 aa1.99□□□□□ -2.09
CALD1-221ENST00000489019 A0A1B0GWB2 263 aa1.99□□□□□ -2.09
CALD1-221ENST00000489019 A0A1W2PPM0 123 aa1.99□□□□□ -2.09
CALD1-221ENST00000489019 IGLL5B9A064 214 aa1.99□□□□□ -2.09
CALD1-221ENST00000489019 K7ERJ3 54 aa1.99□□□□□ -2.09
CALD1-221ENST00000489019 APOMO95445 188 aa1.99□□□□□ -2.09
CALD1-221ENST00000489019 ZNF22P17026 224 aaPredicted RBP1.99□□□□□ -2.09
CALD1-221ENST00000489019 CRYBA4P53673 196 aa1.99□□□□□ -2.09
CALD1-221ENST00000489019 DAZ2Q13117 558 aaKnown RBP1.99□□□□□ -2.09
CALD1-221ENST00000489019 C12orf74Q32Q52 190 aa1.99□□□□□ -2.09
CALD1-221ENST00000489019 RNASE13Q5GAN3 156 aaKnown RBP1.99□□□□□ -2.09
CALD1-221ENST00000489019 C9orf66Q5T8R8 295 aa1.99□□□□□ -2.09
CALD1-221ENST00000489019 UFSP1Q6NVU6 142 aa1.99□□□□□ -2.09
CALD1-221ENST00000489019 CEMP1Q6PRD7 247 aaPredicted RBP1.99□□□□□ -2.09
CALD1-221ENST00000489019 Q6ZTI0 123 aa1.99□□□□□ -2.09
CALD1-221ENST00000489019 DAZ4Q86SG3 579 aaKnown RBP1.99□□□□□ -2.09
CALD1-221ENST00000489019 OR5A1Q8NGJ0 315 aa1.99□□□□□ -2.09
CALD1-221ENST00000489019 CHCHD7Q9BUK0 85 aa1.99□□□□□ -2.09
CALD1-221ENST00000489019 DAZ3Q9NR90 486 aaKnown RBP1.99□□□□□ -2.09
CALD1-221ENST00000489019 UBE2D4Q9Y2X8 147 aa1.99□□□□□ -2.09
CALD1-221ENST00000489019 NBEAQ8NFP9 2946 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms