RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 VCX2Q9H322 139 aa9.66□□□□□ -0.86
CHD1L-208ENST00000488864 DNHD1Q96M86 4753 aa9.66□□□□□ -0.86
CHD1L-208ENST00000488864 BEAN1Q3B7T3 259 aa9.66□□□□□ -0.86
CHD1L-208ENST00000488864 ANAPC13Q9BS18 74 aa9.66□□□□□ -0.86
CHD1L-208ENST00000488864 ZFAND6Q6FIF0 208 aa9.65□□□□□ -0.86
CHD1L-208ENST00000488864 MUSTN1Q8IVN3 82 aa9.65□□□□□ -0.86
CHD1L-208ENST00000488864 TMEM223A0PJW6 202 aa9.64□□□□□ -0.87
CHD1L-208ENST00000488864 FAM74A4Q5TZK3 123 aa9.64□□□□□ -0.87
CHD1L-208ENST00000488864 C19orf73Q9NVV2 129 aa9.64□□□□□ -0.87
CHD1L-208ENST00000488864 NBEAL1Q6ZS30 2694 aa9.63□□□□□ -0.87
CHD1L-208ENST00000488864 TRBV27A0A0K0K1C4 114 aa9.63□□□□□ -0.87
CHD1L-208ENST00000488864 TMEM262E9PQX1 116 aa9.63□□□□□ -0.87
CHD1L-208ENST00000488864 H3BMM0 161 aa9.63□□□□□ -0.87
CHD1L-208ENST00000488864 LEPROTO15243 131 aa9.63□□□□□ -0.87
CHD1L-208ENST00000488864 NHLRC4P0CG21 123 aaPredicted RBP9.63□□□□□ -0.87
CHD1L-208ENST00000488864 FAM159AQ6UWV7 190 aa9.63□□□□□ -0.87
CHD1L-208ENST00000488864 SS18L2Q9UHA2 77 aa9.63□□□□□ -0.87
CHD1L-208ENST00000488864 TRAV12-3A0A0B4J271 114 aa9.63□□□□□ -0.87
CHD1L-208ENST00000488864 KLLNB2CW77 178 aa9.63□□□□□ -0.87
CHD1L-208ENST00000488864 SPINK13Q1W4C9 94 aa9.63□□□□□ -0.87
CHD1L-208ENST00000488864 NTN5Q8WTR8 489 aaPredicted RBP9.63□□□□□ -0.87
CHD1L-208ENST00000488864 TRAV12-2A0A075B6T6 113 aa9.62□□□□□ -0.87
CHD1L-208ENST00000488864 RBMY1BA6NDE4 496 aaKnown RBP9.62□□□□□ -0.87
CHD1L-208ENST00000488864 RBMY1EA6NEQ0 496 aaKnown RBP9.62□□□□□ -0.87
CHD1L-208ENST00000488864 RBMY1DP0C7P1 496 aaKnown RBP9.62□□□□□ -0.87
CHD1L-208ENST00000488864 P0DMU3 169 aa9.62□□□□□ -0.87
CHD1L-208ENST00000488864 FAM231AP0DMU4 169 aa9.62□□□□□ -0.87
CHD1L-208ENST00000488864 FAM231CP0DMU5 169 aa9.62□□□□□ -0.87
CHD1L-208ENST00000488864 STHQ8IWL8 128 aa9.62□□□□□ -0.87
CHD1L-208ENST00000488864 TRAV4A0A0B4J268 109 aa9.61□□□□□ -0.87
CHD1L-208ENST00000488864 TRBV6-5A0A0K0K1A5 114 aa9.61□□□□□ -0.87
CHD1L-208ENST00000488864 ZNF22P17026 224 aaPredicted RBP9.61□□□□□ -0.87
CHD1L-208ENST00000488864 Q8N1Y9 231 aa9.61□□□□□ -0.87
CHD1L-208ENST00000488864 A0A0B4J2C4 111 aa9.61□□□□□ -0.87
CHD1L-208ENST00000488864 A0A0J9YXV3 536 aa9.61□□□□□ -0.87
CHD1L-208ENST00000488864 KRTAP10-11P60412 298 aa9.61□□□□□ -0.87
CHD1L-208ENST00000488864 MDFICQ9P1T7 246 aa9.61□□□□□ -0.87
CHD1L-208ENST00000488864 TRBV7-9A0A0J9YWB2 115 aa9.6□□□□□ -0.87
CHD1L-208ENST00000488864 M0QXV9 152 aa9.6□□□□□ -0.87
CHD1L-208ENST00000488864 M0QY20 66 aa9.6□□□□□ -0.87
CHD1L-208ENST00000488864 WIPF1O43516 503 aa9.6□□□□□ -0.87
CHD1L-208ENST00000488864 RPL35AP18077 110 aaKnown RBP9.6□□□□□ -0.87
CHD1L-208ENST00000488864 RHODO00212 210 aa9.6□□□□□ -0.87
CHD1L-208ENST00000488864 ZNF56Q15929 161 aa9.6□□□□□ -0.87
CHD1L-208ENST00000488864 Q1RN00 199 aa9.6□□□□□ -0.87
CHD1L-208ENST00000488864 LINC01620Q4KN68 170 aa9.6□□□□□ -0.87
CHD1L-208ENST00000488864 TEX49A0A1B0GTD5 131 aa9.59□□□□□ -0.87
CHD1L-208ENST00000488864 B5MCH6 92 aa9.59□□□□□ -0.87
CHD1L-208ENST00000488864 M0R2P5 195 aa9.59□□□□□ -0.87
CHD1L-208ENST00000488864 GAGE5Q13069 117 aa9.59□□□□□ -0.87
CHD1L-208ENST00000488864 GAGE6Q13070 117 aa9.59□□□□□ -0.87
CHD1L-208ENST00000488864 NBEAL2Q6ZNJ1 2754 aa9.59□□□□□ -0.87
CHD1L-208ENST00000488864 IGHV3-16A0A0C4DH30 117 aa9.58□□□□□ -0.88
CHD1L-208ENST00000488864 A0A0J9YXY3 114 aa9.58□□□□□ -0.88
CHD1L-208ENST00000488864 GAGE2BQ13066 116 aa9.58□□□□□ -0.88
CHD1L-208ENST00000488864 ATXN8Q156A1 80 aa9.58□□□□□ -0.88
CHD1L-208ENST00000488864 GAGE2EQ4V326 116 aa9.58□□□□□ -0.88
CHD1L-208ENST00000488864 C9orf85Q96MD7 179 aa9.58□□□□□ -0.88
CHD1L-208ENST00000488864 FAM110AQ9BQ89 295 aa9.58□□□□□ -0.88
CHD1L-208ENST00000488864 GAGE2DQ9UEU5 116 aa9.58□□□□□ -0.88
CHD1L-208ENST00000488864 TRIAP1O43715 76 aa9.57□□□□□ -0.88
CHD1L-208ENST00000488864 CMC4P56277 68 aaPredicted RBP9.57□□□□□ -0.88
CHD1L-208ENST00000488864 C20orf203Q8NBC4 194 aa9.57□□□□□ -0.88
CHD1L-208ENST00000488864 XCL2Q9UBD3 114 aa9.57□□□□□ -0.88
CHD1L-208ENST00000488864 IGLV4-3A0A075B6K6 122 aa9.57□□□□□ -0.88
CHD1L-208ENST00000488864 SNCGO76070 127 aa9.57□□□□□ -0.88
CHD1L-208ENST00000488864 NDUFV3P56181 108 aaKnown RBP9.57□□□□□ -0.88
CHD1L-208ENST00000488864 ODF3Q96PU9 254 aa9.57□□□□□ -0.88
CHD1L-208ENST00000488864 PRB2P02812 416 aaPredicted RBP9.56□□□□□ -0.88
CHD1L-208ENST00000488864 RHOHQ15669 191 aa9.56□□□□□ -0.88
CHD1L-208ENST00000488864 LITAFQ99732 161 aa9.56□□□□□ -0.88
CHD1L-208ENST00000488864 SPXQ9BT56 116 aa9.56□□□□□ -0.88
CHD1L-208ENST00000488864 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.56□□□□□ -0.88
CHD1L-208ENST00000488864 A8MTW9 85 aa9.55□□□□□ -0.88
CHD1L-208ENST00000488864 RBMY1A1P0DJD3 496 aaKnown RBP9.55□□□□□ -0.88
CHD1L-208ENST00000488864 RBMY1CP0DJD4 496 aa9.55□□□□□ -0.88
CHD1L-208ENST00000488864 IGHV3-30-3P0DP02 117 aa9.55□□□□□ -0.88
CHD1L-208ENST00000488864 EGFEM1PQ0D2K5 195 aa9.55□□□□□ -0.88
CHD1L-208ENST00000488864 RBMY1FQ15415 496 aaKnown RBP9.55□□□□□ -0.88
CHD1L-208ENST00000488864 ADAMTSL4-AS1Q5T5F5 129 aa9.55□□□□□ -0.88
CHD1L-208ENST00000488864 TRAV8-3A0A0A6YYJ7 113 aa9.55□□□□□ -0.88
CHD1L-208ENST00000488864 TRAV8-4A0A0B4J246 113 aa9.55□□□□□ -0.88
CHD1L-208ENST00000488864 TRBV10-2A0A0K0K1G8 114 aa9.55□□□□□ -0.88
CHD1L-208ENST00000488864 CCDC179H3BU77 68 aa9.55□□□□□ -0.88
CHD1L-208ENST00000488864 PRM2P04554 102 aa9.55□□□□□ -0.88
CHD1L-208ENST00000488864 HTN1P15515 57 aa9.55□□□□□ -0.88
CHD1L-208ENST00000488864 FAM104AQ969W3 186 aa9.55□□□□□ -0.88
CHD1L-208ENST00000488864 TRBV30A0A0K0K1B3 111 aa9.54□□□□□ -0.88
CHD1L-208ENST00000488864 IGHV3OR16-12A0A075B7B8 117 aa9.54□□□□□ -0.88
CHD1L-208ENST00000488864 I3L3M4 83 aa9.54□□□□□ -0.88
CHD1L-208ENST00000488864 PRSS2P07478 247 aa9.54□□□□□ -0.88
CHD1L-208ENST00000488864 RPL13AP40429 203 aaKnown RBP9.54□□□□□ -0.88
CHD1L-208ENST00000488864 CEMP1Q6PRD7 247 aaPredicted RBP9.54□□□□□ -0.88
CHD1L-208ENST00000488864 C15orf53Q8NAA6 179 aa9.54□□□□□ -0.88
CHD1L-208ENST00000488864 LINC01600Q96MT4 127 aa9.54□□□□□ -0.88
CHD1L-208ENST00000488864 GIG44P09565 113 aaPredicted RBP9.53□□□□□ -0.88
CHD1L-208ENST00000488864 RNASE13Q5GAN3 156 aaKnown RBP9.53□□□□□ -0.88
CHD1L-208ENST00000488864 A8MZ25 164 aa9.53□□□□□ -0.88
CHD1L-208ENST00000488864 IGHV4-30-4P0DP06 118 aa9.53□□□□□ -0.88
CHD1L-208ENST00000488864 NPC2P61916 151 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms