RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 ZFAND2AQ8N6M9 145 aa10.03□□□□□ -0.8
COPS7B-221ENST00000488111 VWFP04275 2813 aa10.03□□□□□ -0.8
COPS7B-221ENST00000488111 TRAV21A0A0B4J279 112 aa10.03□□□□□ -0.8
COPS7B-221ENST00000488111 S100A4P26447 101 aaKnown RBP10.03□□□□□ -0.8
COPS7B-221ENST00000488111 ID1P41134 155 aa10.03□□□□□ -0.8
COPS7B-221ENST00000488111 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.02□□□□□ -0.8
COPS7B-221ENST00000488111 H3BMM0 161 aa10.02□□□□□ -0.8
COPS7B-221ENST00000488111 POLR2KP53803 58 aaKnown RBP10.02□□□□□ -0.8
COPS7B-221ENST00000488111 UBE2WQ96B02 151 aa10.02□□□□□ -0.8
COPS7B-221ENST00000488111 LEPROTO15243 131 aa10.02□□□□□ -0.81
COPS7B-221ENST00000488111 LINC00315P59091 139 aa10.02□□□□□ -0.81
COPS7B-221ENST00000488111 MUSTN1Q8IVN3 82 aa10.02□□□□□ -0.81
COPS7B-221ENST00000488111 TNFRSF18Q9Y5U5 241 aa10.02□□□□□ -0.81
COPS7B-221ENST00000488111 TRBV30A0A0K0K1B3 111 aa10.01□□□□□ -0.81
COPS7B-221ENST00000488111 NXPH4O95158 308 aa10.01□□□□□ -0.81
COPS7B-221ENST00000488111 SNRPD3P62318 126 aaKnown RBP10.01□□□□□ -0.81
COPS7B-221ENST00000488111 RPL39P62891 51 aaKnown RBP10.01□□□□□ -0.81
COPS7B-221ENST00000488111 LINC00477Q96M19 166 aa10.01□□□□□ -0.81
COPS7B-221ENST00000488111 KIF25-AS1Q9Y6Z4 181 aa10.01□□□□□ -0.81
COPS7B-221ENST00000488111 SORL1Q92673 2214 aa10.01□□□□□ -0.81
COPS7B-221ENST00000488111 TRAV2A0A0B4J234 112 aa10.01□□□□□ -0.81
COPS7B-221ENST00000488111 H7C2G1 150 aa10.01□□□□□ -0.81
COPS7B-221ENST00000488111 TMEM223A0PJW6 202 aa10□□□□□ -0.81
COPS7B-221ENST00000488111 IGLV1-51P01701 117 aa10□□□□□ -0.81
COPS7B-221ENST00000488111 MEIG1Q5JSS6 88 aa10□□□□□ -0.81
COPS7B-221ENST00000488111 ZNF256Q9Y2P7 627 aaPredicted RBP10□□□□□ -0.81
COPS7B-221ENST00000488111 A0A0J9YX75 114 aa10□□□□□ -0.81
COPS7B-221ENST00000488111 RNASE3P12724 160 aaKnown RBP10□□□□□ -0.81
COPS7B-221ENST00000488111 DEFB131AP59861 70 aa10□□□□□ -0.81
COPS7B-221ENST00000488111 STAB1Q9NY15 2570 aa9.99□□□□□ -0.81
COPS7B-221ENST00000488111 COL6A5A8TX70 2615 aa9.99□□□□□ -0.81
COPS7B-221ENST00000488111 M0R2P5 195 aa9.99□□□□□ -0.81
COPS7B-221ENST00000488111 VCYO14598 125 aa9.99□□□□□ -0.81
COPS7B-221ENST00000488111 Q1RN00 199 aa9.99□□□□□ -0.81
COPS7B-221ENST00000488111 FAM240AA0A1B0GVK7 77 aa9.99□□□□□ -0.81
COPS7B-221ENST00000488111 TRIAP1O43715 76 aa9.99□□□□□ -0.81
COPS7B-221ENST00000488111 IGKV3-20P01619 116 aa9.99□□□□□ -0.81
COPS7B-221ENST00000488111 TRAV25A0A0B4J276 109 aa9.98□□□□□ -0.81
COPS7B-221ENST00000488111 H3BT86 120 aa9.98□□□□□ -0.81
COPS7B-221ENST00000488111 DEFB121Q5J5C9 76 aa9.98□□□□□ -0.81
COPS7B-221ENST00000488111 APRG1Q8IVJ8 170 aa9.98□□□□□ -0.81
COPS7B-221ENST00000488111 FAM19A4Q96LR4 140 aa9.98□□□□□ -0.81
COPS7B-221ENST00000488111 SDHAF1A6NFY7 115 aa9.97□□□□□ -0.81
COPS7B-221ENST00000488111 KNCNA6PVL3 124 aa9.97□□□□□ -0.81
COPS7B-221ENST00000488111 C2orf82Q6UX34 121 aa9.97□□□□□ -0.81
COPS7B-221ENST00000488111 MDFIQ99750 246 aa9.97□□□□□ -0.81
COPS7B-221ENST00000488111 TMEM126AQ9H061 195 aa9.97□□□□□ -0.81
COPS7B-221ENST00000488111 NOTCH3Q9UM47 2321 aa9.97□□□□□ -0.81
COPS7B-221ENST00000488111 TRBV7-7A0A0K0K1E9 115 aa9.97□□□□□ -0.81
COPS7B-221ENST00000488111 GNRH2O43555 120 aa9.97□□□□□ -0.81
COPS7B-221ENST00000488111 SUMO4Q6EEV6 95 aa9.97□□□□□ -0.81
COPS7B-221ENST00000488111 MAP6D1Q9H9H5 199 aa9.97□□□□□ -0.81
COPS7B-221ENST00000488111 H7C423 109 aa9.96□□□□□ -0.81
COPS7B-221ENST00000488111 LINC01587Q99440 93 aa9.96□□□□□ -0.81
COPS7B-221ENST00000488111 TRBV6-5A0A0K0K1A5 114 aa9.95□□□□□ -0.82
COPS7B-221ENST00000488111 TRBV27A0A0K0K1C4 114 aa9.95□□□□□ -0.82
COPS7B-221ENST00000488111 ZNF22P17026 224 aaPredicted RBP9.95□□□□□ -0.82
COPS7B-221ENST00000488111 ODF3L2Q3SX64 289 aa9.95□□□□□ -0.82
COPS7B-221ENST00000488111 C9orf66Q5T8R8 295 aa9.95□□□□□ -0.82
COPS7B-221ENST00000488111 A0A0J9YXY3 114 aa9.95□□□□□ -0.82
COPS7B-221ENST00000488111 WFDC9Q8NEX5 89 aa9.95□□□□□ -0.82
COPS7B-221ENST00000488111 DEFB104AQ8WTQ1 72 aa9.95□□□□□ -0.82
COPS7B-221ENST00000488111 RNASE4P34096 147 aaKnown RBP9.94□□□□□ -0.82
COPS7B-221ENST00000488111 ICOSQ9Y6W8 199 aa9.94□□□□□ -0.82
COPS7B-221ENST00000488111 ZNF56Q15929 161 aa9.94□□□□□ -0.82
COPS7B-221ENST00000488111 LITAFQ99732 161 aa9.94□□□□□ -0.82
COPS7B-221ENST00000488111 CHCHD5Q9BSY4 110 aa9.94□□□□□ -0.82
COPS7B-221ENST00000488111 WFDC10AQ9H1F0 79 aa9.94□□□□□ -0.82
COPS7B-221ENST00000488111 RHOHQ15669 191 aa9.92□□□□□ -0.82
COPS7B-221ENST00000488111 BEAN1Q3B7T3 259 aa9.92□□□□□ -0.82
COPS7B-221ENST00000488111 OPRPNQ99935 248 aaPredicted RBP9.92□□□□□ -0.82
COPS7B-221ENST00000488111 JPT2Q9H910 190 aa9.92□□□□□ -0.82
COPS7B-221ENST00000488111 IGHV3-64A0A075B6Q5 118 aa9.91□□□□□ -0.82
COPS7B-221ENST00000488111 LST1O00453 97 aa9.91□□□□□ -0.82
COPS7B-221ENST00000488111 OXLD1Q5BKU9 147 aa9.91□□□□□ -0.82
COPS7B-221ENST00000488111 TRAV12-2A0A075B6T6 113 aa9.9□□□□□ -0.82
COPS7B-221ENST00000488111 SPINK13Q1W4C9 94 aa9.9□□□□□ -0.82
COPS7B-221ENST00000488111 SPANXDQ9BXN6 97 aa9.9□□□□□ -0.82
COPS7B-221ENST00000488111 SPANXCQ9NY87 97 aa9.9□□□□□ -0.82
COPS7B-221ENST00000488111 RBMY1BA6NDE4 496 aaKnown RBP9.9□□□□□ -0.82
COPS7B-221ENST00000488111 RBMY1EA6NEQ0 496 aaKnown RBP9.9□□□□□ -0.82
COPS7B-221ENST00000488111 COX6CP09669 75 aa9.9□□□□□ -0.82
COPS7B-221ENST00000488111 RBMY1DP0C7P1 496 aaKnown RBP9.9□□□□□ -0.82
COPS7B-221ENST00000488111 TMEM101Q96IK0 257 aa9.9□□□□□ -0.82
COPS7B-221ENST00000488111 IMUPQ9GZP8 106 aa9.9□□□□□ -0.82
COPS7B-221ENST00000488111 C19orf73Q9NVV2 129 aa9.9□□□□□ -0.82
COPS7B-221ENST00000488111 A0A087WWL8 130 aa9.89□□□□□ -0.83
COPS7B-221ENST00000488111 A0A0J9YXV3 536 aa9.89□□□□□ -0.83
COPS7B-221ENST00000488111 F5H697 171 aa9.89□□□□□ -0.83
COPS7B-221ENST00000488111 PPDPFQ9H3Y8 114 aa9.89□□□□□ -0.83
COPS7B-221ENST00000488111 CMYA5Q8N3K9 4069 aa9.89□□□□□ -0.83
COPS7B-221ENST00000488111 IGHV3-30-3P0DP02 117 aa9.88□□□□□ -0.83
COPS7B-221ENST00000488111 STHQ8IWL8 128 aa9.88□□□□□ -0.83
COPS7B-221ENST00000488111 MUC4Q99102 2169 aa9.88□□□□□ -0.83
COPS7B-221ENST00000488111 IGLV4-3A0A075B6K6 122 aa9.88□□□□□ -0.83
COPS7B-221ENST00000488111 TRGV11A0A075B6L2 103 aa9.88□□□□□ -0.83
COPS7B-221ENST00000488111 C20orf203Q8NBC4 194 aa9.88□□□□□ -0.83
COPS7B-221ENST00000488111 CLEC2BQ92478 149 aa9.88□□□□□ -0.83
COPS7B-221ENST00000488111 TRAV12-3A0A0B4J271 114 aa9.87□□□□□ -0.83
COPS7B-221ENST00000488111 KLLNB2CW77 178 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 152.7 ms