RNA–Protein interactions for RNA: ENST00000487431.1

RPL35-203, Transcript of ribosomal protein L35, humanhuman

TSL 1 (best)

Gene RPL35, Length 785 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35-203ENST00000487431 PLAC8Q9NZF1 115 aa13.57□□□□□ -0.24
RPL35-203ENST00000487431 S100A8P05109 93 aa13.56□□□□□ -0.24
RPL35-203ENST00000487431 CFAP161Q6P656 301 aa13.56□□□□□ -0.24
RPL35-203ENST00000487431 GAGE12HA6NDE8 117 aa13.55□□□□□ -0.24
RPL35-203ENST00000487431 NCR2O95944 276 aa13.55□□□□□ -0.24
RPL35-203ENST00000487431 RHEBQ15382 184 aa13.55□□□□□ -0.24
RPL35-203ENST00000487431 TRAV26-2A0A0B4J265 109 aa13.54□□□□□ -0.24
RPL35-203ENST00000487431 H7C423 109 aa13.54□□□□□ -0.24
RPL35-203ENST00000487431 SVBPQ8N300 66 aa13.54□□□□□ -0.24
RPL35-203ENST00000487431 IMMP2LQ96T52 175 aa13.54□□□□□ -0.24
RPL35-203ENST00000487431 APOC3P02656 99 aa13.53□□□□□ -0.24
RPL35-203ENST00000487431 ATP5L2Q7Z4Y8 100 aa13.53□□□□□ -0.24
RPL35-203ENST00000487431 RPL39LQ96EH5 51 aaKnown RBP13.53□□□□□ -0.24
RPL35-203ENST00000487431 DPH3Q96FX2 82 aa13.53□□□□□ -0.24
RPL35-203ENST00000487431 TMEM191AQ9H0A3 160 aa13.53□□□□□ -0.24
RPL35-203ENST00000487431 TMEM242Q9NWH2 141 aa13.53□□□□□ -0.24
RPL35-203ENST00000487431 SNAPINO95295 136 aa13.52□□□□□ -0.25
RPL35-203ENST00000487431 RPS10P46783 165 aaKnown RBP13.52□□□□□ -0.25
RPL35-203ENST00000487431 GVQW2A0A096LPI5 108 aaPredicted RBP13.51□□□□□ -0.25
RPL35-203ENST00000487431 C7orf77A4D0Y5 90 aa13.51□□□□□ -0.25
RPL35-203ENST00000487431 HBBP68871 147 aa13.51□□□□□ -0.25
RPL35-203ENST00000487431 COX6A2Q02221 97 aa13.51□□□□□ -0.25
RPL35-203ENST00000487431 CHCHD10Q8WYQ3 142 aaPredicted RBP13.51□□□□□ -0.25
RPL35-203ENST00000487431 S100PP25815 95 aa13.5□□□□□ -0.25
RPL35-203ENST00000487431 AMMECR1LQ6DCA0 310 aa13.5□□□□□ -0.25
RPL35-203ENST00000487431 SLC7A5P1Q8MH63 180 aa13.5□□□□□ -0.25
RPL35-203ENST00000487431 BTF3L4Q96K17 158 aa13.5□□□□□ -0.25
RPL35-203ENST00000487431 IGKV3OR2-268A0A0C4DH90 116 aa13.49□□□□□ -0.25
RPL35-203ENST00000487431 APCSP02743 223 aa13.49□□□□□ -0.25
RPL35-203ENST00000487431 CAMPP49913 170 aa13.49□□□□□ -0.25
RPL35-203ENST00000487431 MRPL54Q6P161 138 aaKnown RBP13.49□□□□□ -0.25
RPL35-203ENST00000487431 RPS10P5Q9NQ39 176 aa13.49□□□□□ -0.25
RPL35-203ENST00000487431 TNXBP22105 4242 aa13.48□□□□□ -0.25
RPL35-203ENST00000487431 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.48□□□□□ -0.25
RPL35-203ENST00000487431 TRAV9-1A0A075B6T8 112 aa13.48□□□□□ -0.25
RPL35-203ENST00000487431 IGKV2-29A2NJV5 120 aaPredicted RBP13.48□□□□□ -0.25
RPL35-203ENST00000487431 SDHAF1A6NFY7 115 aa13.48□□□□□ -0.25
RPL35-203ENST00000487431 PHOX2AO14813 284 aa13.48□□□□□ -0.25
RPL35-203ENST00000487431 FGF6P10767 208 aa13.48□□□□□ -0.25
RPL35-203ENST00000487431 ZNF25P17030 456 aaPredicted RBP13.48□□□□□ -0.25
RPL35-203ENST00000487431 HIGD2BQ4VC39 106 aa13.48□□□□□ -0.25
RPL35-203ENST00000487431 PRSS3P2Q8NHM4 247 aa13.48□□□□□ -0.25
RPL35-203ENST00000487431 C7orf33Q8WU49 177 aa13.48□□□□□ -0.25
RPL35-203ENST00000487431 TRBV6-5A0A0K0K1A5 114 aa13.47□□□□□ -0.25
RPL35-203ENST00000487431 A0A1B0GXF2 115 aa13.47□□□□□ -0.25
RPL35-203ENST00000487431 FOXI1Q12951 378 aa13.47□□□□□ -0.25
RPL35-203ENST00000487431 RNASEKQ6P5S7 137 aaKnown RBP13.47□□□□□ -0.25
RPL35-203ENST00000487431 OR5A1Q8NGJ0 315 aa13.47□□□□□ -0.25
RPL35-203ENST00000487431 MRAP2Q96G30 205 aa13.47□□□□□ -0.25
RPL35-203ENST00000487431 I3L3M4 83 aa13.45□□□□□ -0.26
RPL35-203ENST00000487431 RAB4AP20338 218 aa13.45□□□□□ -0.26
RPL35-203ENST00000487431 AMN1Q8IY45 258 aa13.45□□□□□ -0.26
RPL35-203ENST00000487431 ESDP10768 282 aa13.44□□□□□ -0.26
RPL35-203ENST00000487431 MAJINQ3KP22 176 aa13.44□□□□□ -0.26
RPL35-203ENST00000487431 FAM104BQ5XKR9 115 aa13.44□□□□□ -0.26
RPL35-203ENST00000487431 PPP1R17O96001 155 aa13.43□□□□□ -0.26
RPL35-203ENST00000487431 IGKV2-24A0A0C4DH68 120 aa13.42□□□□□ -0.26
RPL35-203ENST00000487431 LINC00959A0A1B0GUT2 108 aa13.42□□□□□ -0.26
RPL35-203ENST00000487431 PMCHP20382 165 aa13.42□□□□□ -0.26
RPL35-203ENST00000487431 PRR3P79522 188 aaKnown RBP13.42□□□□□ -0.26
RPL35-203ENST00000487431 STPG4Q8N801 248 aa13.42□□□□□ -0.26
RPL35-203ENST00000487431 A0A096LNI7 61 aa13.41□□□□□ -0.26
RPL35-203ENST00000487431 TSHBP01222 138 aa13.41□□□□□ -0.26
RPL35-203ENST00000487431 GAS8-AS1O95177 125 aa13.4□□□□□ -0.26
RPL35-203ENST00000487431 TMEM101Q96IK0 257 aa13.4□□□□□ -0.26
RPL35-203ENST00000487431 LINC01600Q96MT4 127 aa13.4□□□□□ -0.26
RPL35-203ENST00000487431 LINC00474Q9P2X8 69 aa13.4□□□□□ -0.26
RPL35-203ENST00000487431 IGHV1-58A0A0C4DH39 117 aa13.39□□□□□ -0.27
RPL35-203ENST00000487431 CCL25O15444 150 aa13.39□□□□□ -0.27
RPL35-203ENST00000487431 XCL1P47992 114 aa13.39□□□□□ -0.27
RPL35-203ENST00000487431 COX19Q49B96 90 aa13.39□□□□□ -0.27
RPL35-203ENST00000487431 MRPL51Q4U2R6 128 aaKnown RBP13.39□□□□□ -0.27
RPL35-203ENST00000487431 MRPL52Q86TS9 123 aaKnown RBP13.39□□□□□ -0.27
RPL35-203ENST00000487431 ST20Q9HBF5 79 aa13.39□□□□□ -0.27
RPL35-203ENST00000487431 PKIGQ9Y2B9 76 aa13.39□□□□□ -0.27
RPL35-203ENST00000487431 PPBPP02775 128 aa13.38□□□□□ -0.27
RPL35-203ENST00000487431 CKS2P33552 79 aa13.38□□□□□ -0.27
RPL35-203ENST00000487431 POLR2KP53803 58 aaKnown RBP13.38□□□□□ -0.27
RPL35-203ENST00000487431 CDC42SE2Q9NRR3 84 aa13.38□□□□□ -0.27
RPL35-203ENST00000487431 TRBV27A0A0K0K1C4 114 aa13.37□□□□□ -0.27
RPL35-203ENST00000487431 LRP2P98164 4655 aa13.36□□□□□ -0.27
RPL35-203ENST00000487431 CD164L2Q6UWJ8 174 aa13.36□□□□□ -0.27
RPL35-203ENST00000487431 SS18Q15532 418 aa13.35□□□□□ -0.27
RPL35-203ENST00000487431 ORMDL3Q8N138 153 aa13.35□□□□□ -0.27
RPL35-203ENST00000487431 CARD19Q96LW7 228 aa13.35□□□□□ -0.27
RPL35-203ENST00000487431 ZNF664Q8N3J9 261 aa13.34□□□□□ -0.27
RPL35-203ENST00000487431 LINC00526Q96FQ7 95 aa13.34□□□□□ -0.27
RPL35-203ENST00000487431 D6R8Y8 96 aa13.33□□□□□ -0.28
RPL35-203ENST00000487431 SMKR1H3BMG3 65 aa13.33□□□□□ -0.28
RPL35-203ENST00000487431 MT-ND6P03923 174 aa13.33□□□□□ -0.28
RPL35-203ENST00000487431 TMEM136Q6ZRR5 245 aa13.33□□□□□ -0.28
RPL35-203ENST00000487431 C20orf78Q9BR46 151 aa13.33□□□□□ -0.28
RPL35-203ENST00000487431 GNB1LQ9BYB4 327 aa13.33□□□□□ -0.28
RPL35-203ENST00000487431 TRBV24-1A0A075B6N3 115 aa13.32□□□□□ -0.28
RPL35-203ENST00000487431 SUMO2P61956 95 aaKnown RBP13.32□□□□□ -0.28
RPL35-203ENST00000487431 SPINK6Q6UWN8 80 aa13.32□□□□□ -0.28
RPL35-203ENST00000487431 NRACQ8N912 160 aa13.32□□□□□ -0.28
RPL35-203ENST00000487431 SMCO4Q9NRQ5 59 aa13.32□□□□□ -0.28
RPL35-203ENST00000487431 LAMTOR2Q9Y2Q5 125 aa13.32□□□□□ -0.28
RPL35-203ENST00000487431 SYCNQ0VAF6 134 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms