RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 Q6ZUT4 128 aa6.48□□□□□ -1.37
MCF2L-227ENST00000486806 FAM19A2Q8N3H0 131 aa6.48□□□□□ -1.37
MCF2L-227ENST00000486806 TIMM17AQ99595 171 aa6.48□□□□□ -1.37
MCF2L-227ENST00000486806 KRTAP1-5Q9BYS1 174 aa6.48□□□□□ -1.37
MCF2L-227ENST00000486806 IGLV4-3A0A075B6K6 122 aa6.47□□□□□ -1.37
MCF2L-227ENST00000486806 K7EP13 123 aa6.47□□□□□ -1.37
MCF2L-227ENST00000486806 LY6G6CO95867 125 aa6.47□□□□□ -1.37
MCF2L-227ENST00000486806 MRPS36P82909 103 aaKnown RBP6.47□□□□□ -1.37
MCF2L-227ENST00000486806 SMAGPQ0VAQ4 97 aa6.47□□□□□ -1.37
MCF2L-227ENST00000486806 ERASQ7Z444 233 aa6.47□□□□□ -1.37
MCF2L-227ENST00000486806 OR5A1Q8NGJ0 315 aa6.47□□□□□ -1.37
MCF2L-227ENST00000486806 CDC42SE2Q9NRR3 84 aa6.47□□□□□ -1.37
MCF2L-227ENST00000486806 PRR34Q9NV39 138 aa6.47□□□□□ -1.37
MCF2L-227ENST00000486806 NBDYA0A0U1RRE5 68 aa6.46□□□□□ -1.38
MCF2L-227ENST00000486806 LCE6AA0A183 80 aa6.46□□□□□ -1.38
MCF2L-227ENST00000486806 C10orf126Q8N4M7 172 aa6.46□□□□□ -1.38
MCF2L-227ENST00000486806 TMEM141Q96I45 108 aa6.46□□□□□ -1.38
MCF2L-227ENST00000486806 TMEM101Q96IK0 257 aa6.46□□□□□ -1.38
MCF2L-227ENST00000486806 SCGB3A1Q96QR1 104 aa6.46□□□□□ -1.38
MCF2L-227ENST00000486806 OPRPNQ99935 248 aaPredicted RBP6.46□□□□□ -1.38
MCF2L-227ENST00000486806 DNAH10Q8IVF4 4471 aa6.46□□□□□ -1.38
MCF2L-227ENST00000486806 C5orf52A6NGY3 159 aa6.45□□□□□ -1.38
MCF2L-227ENST00000486806 IBA57-AS1B1ANH7 110 aa6.45□□□□□ -1.38
MCF2L-227ENST00000486806 ANGP03950 147 aaKnown RBP6.45□□□□□ -1.38
MCF2L-227ENST00000486806 S100A6P06703 90 aa6.45□□□□□ -1.38
MCF2L-227ENST00000486806 TTC32Q5I0X7 151 aa6.45□□□□□ -1.38
MCF2L-227ENST00000486806 Q6ZR54 194 aa6.45□□□□□ -1.38
MCF2L-227ENST00000486806 LINC00173Q6ZV60 143 aa6.45□□□□□ -1.38
MCF2L-227ENST00000486806 HIST3H2BBQ8N257 126 aa6.45□□□□□ -1.38
MCF2L-227ENST00000486806 ZNF664Q8N3J9 261 aa6.45□□□□□ -1.38
MCF2L-227ENST00000486806 PACRGQ96M98 296 aaPredicted RBP6.45□□□□□ -1.38
MCF2L-227ENST00000486806 AMELXQ99217 191 aa6.45□□□□□ -1.38
MCF2L-227ENST00000486806 KLK12Q9UKR0 248 aa6.45□□□□□ -1.38
MCF2L-227ENST00000486806 ATP5LO75964 103 aa6.44□□□□□ -1.38
MCF2L-227ENST00000486806 LEPROTL1O95214 131 aa6.44□□□□□ -1.38
MCF2L-227ENST00000486806 REG3AQ06141 175 aa6.44□□□□□ -1.38
MCF2L-227ENST00000486806 RNASE13Q5GAN3 156 aaKnown RBP6.44□□□□□ -1.38
MCF2L-227ENST00000486806 DGAT2L7PQ6IED9 249 aa6.44□□□□□ -1.38
MCF2L-227ENST00000486806 ENHOQ6UWT2 76 aa6.44□□□□□ -1.38
MCF2L-227ENST00000486806 LINC00269Q8N2A0 174 aa6.44□□□□□ -1.38
MCF2L-227ENST00000486806 BAALCQ8WXS3 180 aa6.44□□□□□ -1.38
MCF2L-227ENST00000486806 TMA7Q9Y2S6 64 aaKnown RBP6.44□□□□□ -1.38
MCF2L-227ENST00000486806 RYR3Q15413 4870 aa6.43□□□□□ -1.38
MCF2L-227ENST00000486806 TRAV9-2A0A087WT02 112 aa6.43□□□□□ -1.38
MCF2L-227ENST00000486806 IFITM10A6NMD0 228 aa6.43□□□□□ -1.38
MCF2L-227ENST00000486806 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.43□□□□□ -1.38
MCF2L-227ENST00000486806 SNRPEP62304 92 aaKnown RBP6.43□□□□□ -1.38
MCF2L-227ENST00000486806 PAPPA-AS1Q5QFB9 102 aa6.43□□□□□ -1.38
MCF2L-227ENST00000486806 CLPSL2Q6UWE3 100 aa6.43□□□□□ -1.38
MCF2L-227ENST00000486806 Q6ZN92 141 aa6.43□□□□□ -1.38
MCF2L-227ENST00000486806 IFI27L1Q96BM0 104 aa6.43□□□□□ -1.38
MCF2L-227ENST00000486806 HSPB8Q9UJY1 196 aa6.43□□□□□ -1.38
MCF2L-227ENST00000486806 CRPP02741 224 aa6.42□□□□□ -1.38
MCF2L-227ENST00000486806 MIAQ16674 131 aa6.42□□□□□ -1.38
MCF2L-227ENST00000486806 ZC2HC1BQ5TFG8 222 aa6.42□□□□□ -1.38
MCF2L-227ENST00000486806 TEX43Q6ZNM6 134 aa6.42□□□□□ -1.38
MCF2L-227ENST00000486806 UBE2WQ96B02 151 aa6.42□□□□□ -1.38
MCF2L-227ENST00000486806 HIST1H2BLQ99880 126 aa6.42□□□□□ -1.38
MCF2L-227ENST00000486806 DNAH17Q9UFH2 4485 aa6.42□□□□□ -1.38
MCF2L-227ENST00000486806 TRAV8-3A0A0A6YYJ7 113 aa6.41□□□□□ -1.38
MCF2L-227ENST00000486806 LINC00959A0A1B0GUT2 108 aa6.41□□□□□ -1.38
MCF2L-227ENST00000486806 FABP4P15090 132 aa6.41□□□□□ -1.38
MCF2L-227ENST00000486806 UBE2D1P51668 147 aa6.41□□□□□ -1.38
MCF2L-227ENST00000486806 PMVKQ15126 192 aa6.41□□□□□ -1.38
MCF2L-227ENST00000486806 FAM19A3Q7Z5A8 133 aa6.41□□□□□ -1.38
MCF2L-227ENST00000486806 C2orf88Q9BSF0 95 aa6.41□□□□□ -1.38
MCF2L-227ENST00000486806 VCX2Q9H322 139 aa6.41□□□□□ -1.38
MCF2L-227ENST00000486806 CST9LQ9H4G1 147 aa6.41□□□□□ -1.38
MCF2L-227ENST00000486806 FRAS1Q86XX4 4008 aa6.41□□□□□ -1.38
MCF2L-227ENST00000486806 FAT2Q9NYQ8 4349 aa6.4□□□□□ -1.38
MCF2L-227ENST00000486806 TRAV13-1A0A0B4J241 112 aa6.4□□□□□ -1.38
MCF2L-227ENST00000486806 TRAV12-1A0A0B4J245 112 aa6.4□□□□□ -1.38
MCF2L-227ENST00000486806 TRAV8-4A0A0B4J246 113 aa6.4□□□□□ -1.38
MCF2L-227ENST00000486806 IGKV3OR2-268A0A0C4DH90 116 aa6.4□□□□□ -1.38
MCF2L-227ENST00000486806 PRSS29PA6NIE9 313 aa6.4□□□□□ -1.38
MCF2L-227ENST00000486806 M0R2N4 97 aa6.4□□□□□ -1.38
MCF2L-227ENST00000486806 KRTAP26-1Q6PEX3 210 aa6.4□□□□□ -1.38
MCF2L-227ENST00000486806 Q9HAA7 133 aa6.4□□□□□ -1.38
MCF2L-227ENST00000486806 CCL25O15444 150 aa6.39□□□□□ -1.39
MCF2L-227ENST00000486806 S100A2P29034 98 aa6.39□□□□□ -1.39
MCF2L-227ENST00000486806 LINC00242Q5T6M2 205 aa6.39□□□□□ -1.39
MCF2L-227ENST00000486806 Q6ZRN7 208 aaPredicted RBP6.39□□□□□ -1.39
MCF2L-227ENST00000486806 IGLV4-69A0A075B6H9 119 aa6.38□□□□□ -1.39
MCF2L-227ENST00000486806 IGLV10-54A0A075B6I4 117 aa6.38□□□□□ -1.39
MCF2L-227ENST00000486806 SYS1-DBNDD2H3BUS1 97 aa6.38□□□□□ -1.39
MCF2L-227ENST00000486806 PRSS1P07477 247 aa6.38□□□□□ -1.39
MCF2L-227ENST00000486806 C3orf79P0CE67 100 aa6.38□□□□□ -1.39
MCF2L-227ENST00000486806 IGLC3P0DOY3 106 aa6.38□□□□□ -1.39
MCF2L-227ENST00000486806 ODF1Q14990 250 aa6.38□□□□□ -1.39
MCF2L-227ENST00000486806 SS18Q15532 418 aa6.38□□□□□ -1.39
MCF2L-227ENST00000486806 SPATA12Q7Z6I5 190 aa6.38□□□□□ -1.39
MCF2L-227ENST00000486806 C6orf223Q8N319 242 aa6.38□□□□□ -1.39
MCF2L-227ENST00000486806 CHCHD10Q8WYQ3 142 aaPredicted RBP6.38□□□□□ -1.39
MCF2L-227ENST00000486806 C1orf43Q9BWL3 253 aa6.38□□□□□ -1.39
MCF2L-227ENST00000486806 MAP1LC3CQ9BXW4 147 aa6.38□□□□□ -1.39
MCF2L-227ENST00000486806 IGKV2D-24A0A075B6R9 120 aa6.37□□□□□ -1.39
MCF2L-227ENST00000486806 TINCRA0A1B0GVN0 87 aa6.37□□□□□ -1.39
MCF2L-227ENST00000486806 XCL1P47992 114 aa6.37□□□□□ -1.39
MCF2L-227ENST00000486806 FOXI1Q12951 378 aa6.37□□□□□ -1.39
MCF2L-227ENST00000486806 CD164L2Q6UWJ8 174 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms